| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is quiP
Identifier: 77457440
GI number: 77457440
Start: 1385633
End: 1388083
Strand: Reverse
Name: quiP
Synonym: Pfl01_1213
Alternate gene names: 77457440
Gene position: 1388083-1385633 (Counterclockwise)
Preceding gene: 77457441
Following gene: 77457439
Centisome position: 21.56
GC content: 63.69
Gene sequence:
>2451_bases ATGGCCTCGCCAGCCCTTTCACATTTTCTTCCCCGGTTCGGCGTTGCCGCAGCAGTGGCCGGTGTTCTGAGCCTGACCGG TTGTCAGACCTGGAACGCCCAGGACACCCTCCCGCCGACCTCCGGTGTGCAGCCGCTCAAGGGCCTGGCGCAGAACGTTT CGGTACGCCGCAATGCCATGGGCATGCCGCTGATCGAAAGCAACAGTTTCCACGACGCGTTGTTCGCCCTCGGCTATGTG CACGCCAGCGACCGGATCAATCAGATGGTCACCCTGCGCCTGCTGGCCCAGGGTCGTCTCGCGGAAATGTCCGGTTCGTC GATGCTCGACGCCGACCGCTACATGCGCGCCGTCAACCTGAAGAAAAGCGCCGGCGAGCTGTACAAGGCTTCGTCGCCAC GGCTCAAGCGTTTCTTCGAAGTCTATGCCCGGGGCGTCAACGCCTACCTGTTCCGCTACGCCGACAAGTTGCCGGGGGAT CTGGCTTCCAGCGGCTACAAGCCTGAGTACTGGAAACCGGAAGATTCGGCGCTGATCTTCTGCCTGCTGAACTTCAGCCA GTCGGCCAACCTGCCGGAAGAAATCGCTTCGCTGGTGCTGGCACAGACCGTGACCAACGACAAACTGGCGTGGCTGACCC CGTCCGCTCCCGACGAAAACCTGCCGCTGGCCGAAGCCGACAAGCTGCAAGGCATCAAGCTCAACGGGCAGATTCCGGGG CTGACGGAACTGAGCAACGCCAGCGAACAACTGGCCGCCCTCAACCTGCTGGGCACTCAGTCATCGAACAACTGGGCCAT CGCCCCGCAACGCAGCCGCAGCGGCAAGAGCCTGCTGGCCAGCGACAGCCATGGCCCGCTGGCCGCGCCGTCGCTGTGGA GTTTCGTGCAGATCCGCGCTCCGAAATACCAGGCCGCCGGCGTGACCGTGGCCGGTCTGCCGATGGTGCTCGGCGGTTTC AACGGCAAAGTGGCGTGGAGCCTGACCAGCGTGCTCGGCGATAACCAGGATCTGTTCCTGGAAAAAATCCGTCGTCAGGG CAGCAGCCTGACCTACGAGGTCAACGGCAAATGGCAACCGGTCGCCGTGCGCAACGAAACCTACTTCGTCAAAGGCCAGC GGCCGATTCGCGAAGCGGTGTACGAAACCCGCCATGGCGCGCTGCTCAACAGCACCCAGGCTGCCGCTCAGGGCACAGGT TTTGGCCTGGCCTTGCAGACGCCGAGCTTCACCGACGACAAATCACTCGATGCGTTTTTCGATCTGAGCCGCGCGCAGAA CGTGGAACGCGCCTCGGACGCCACCCGGGAAATCCGCGCCATCGCGCTGAATCTGGTGTTTGCCGACGCCAGCAACATTG GCTGGCAAGTCACCGGGCGCTTCCCGAACCGCCGTGAAGGTGAAGGTTTGCTGCCGTCGCCGGGCTGGGAAGGTCGCTAC GACTGGGACGGTTACGCCGACCCGATGCTCCACCCCTACGATCAGGACCCGGCCCAGGGCTGGCTCGGCACCGCCAACCA GCGGGTCATTCCCCACGGCTACGGCATGCAACTGTCCAATTCCTGGGCAGCGCCGGAGCGTGGCGAGCGCCTGGCCGAAC TGGCCGGCAGCGGCAAGCATGACAGTCGCAGCGTGATTGCCATGCAGTACGACCAGACCACCACCTTCGCCGCCAAACTG AAGAAAATGTTTGAAGCACCGGGCATGGCGCAGCCGCTGAAACAGGCGATCGACGCACTGCCGGAAGCCGAGCGCAGCAA GGCCCGCGAGGCCTACACCCGTCTGATGGCGTTCGACGGCAAGCTCAGCCCGACCTCCGCCGACGCGGCGATCTACGAGC TGTTCCTGCAGGAAAGCATGAAGCAGATCTTCCTCGACGAACTCGGCCCGCAAAACAGTCCGGCGTGGAAAGCGTTCATC GCCAATGGCGACTTGTCCTACGCCGCCCAGGCCGATCACTTGCTCGGCCGCGAAGACAGTCCGTTCTGGGACGACGCCCG CACCCCGCAAAAAGAAGACAAACCGGCGATCCTCGCTCGCAGTCTGGCAGCAGCGATCAGCGCTGGCGACAGTCAGTTGG GCGGTGATCGCAGAGCCTGGCAGTGGGGCAAACTGCACCGCTACGAGTGGAAGAATGCCAACGGCCAGAGCGTTCGCGGT CCGATCGCGGCGGGCGGTGACCATACCACCCTGAACACGGCGGCATTTGCCTGGGGCCAGGACTTCAACACCACGCGTGC GCCGTCGATGCGCTTTATCGTCGACTTCGGTCAGAGCGAACCGCTGATGGGGCAGAACGGGACGGGGCAATCGGGGAATC CGGTGAGCCCGAACTACCTGAACGGCATCGACCCGTGGCTCAAGGGCCAGTACATCGGCTTGCCGATGCAGCCGCAGAAC TTTGACCGGGTGTATGGCAAGACGCGGTTGACGCTTACCCCCGGCAAATAA
Upstream 100 bases:
>100_bases GAAGAAATAACCGCTCGCCCCGCTTGCGCGGCCCCCTCCTGCTCACTAACGTAGCGGCTTTATTGCGCCCCCAGCCTCTA CACCCCGCAGGAGCTTTGCC
Downstream 100 bases:
>100_bases ATCCCCATCTGATCGTTCCCACGTCGAGGCGTCGAACCGTCCGCGTGGGAATGCAGCCCGTGACGCTCCGCGTCACTGGA CGCAGAGCGTCCCTTGAGGC
Product: peptidase S45, penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta
Number of amino acids: Translated: 816; Mature: 815
Protein sequence:
>816_residues MASPALSHFLPRFGVAAAVAGVLSLTGCQTWNAQDTLPPTSGVQPLKGLAQNVSVRRNAMGMPLIESNSFHDALFALGYV HASDRINQMVTLRLLAQGRLAEMSGSSMLDADRYMRAVNLKKSAGELYKASSPRLKRFFEVYARGVNAYLFRYADKLPGD LASSGYKPEYWKPEDSALIFCLLNFSQSANLPEEIASLVLAQTVTNDKLAWLTPSAPDENLPLAEADKLQGIKLNGQIPG LTELSNASEQLAALNLLGTQSSNNWAIAPQRSRSGKSLLASDSHGPLAAPSLWSFVQIRAPKYQAAGVTVAGLPMVLGGF NGKVAWSLTSVLGDNQDLFLEKIRRQGSSLTYEVNGKWQPVAVRNETYFVKGQRPIREAVYETRHGALLNSTQAAAQGTG FGLALQTPSFTDDKSLDAFFDLSRAQNVERASDATREIRAIALNLVFADASNIGWQVTGRFPNRREGEGLLPSPGWEGRY DWDGYADPMLHPYDQDPAQGWLGTANQRVIPHGYGMQLSNSWAAPERGERLAELAGSGKHDSRSVIAMQYDQTTTFAAKL KKMFEAPGMAQPLKQAIDALPEAERSKAREAYTRLMAFDGKLSPTSADAAIYELFLQESMKQIFLDELGPQNSPAWKAFI ANGDLSYAAQADHLLGREDSPFWDDARTPQKEDKPAILARSLAAAISAGDSQLGGDRRAWQWGKLHRYEWKNANGQSVRG PIAAGGDHTTLNTAAFAWGQDFNTTRAPSMRFIVDFGQSEPLMGQNGTGQSGNPVSPNYLNGIDPWLKGQYIGLPMQPQN FDRVYGKTRLTLTPGK
Sequences:
>Translated_816_residues MASPALSHFLPRFGVAAAVAGVLSLTGCQTWNAQDTLPPTSGVQPLKGLAQNVSVRRNAMGMPLIESNSFHDALFALGYV HASDRINQMVTLRLLAQGRLAEMSGSSMLDADRYMRAVNLKKSAGELYKASSPRLKRFFEVYARGVNAYLFRYADKLPGD LASSGYKPEYWKPEDSALIFCLLNFSQSANLPEEIASLVLAQTVTNDKLAWLTPSAPDENLPLAEADKLQGIKLNGQIPG LTELSNASEQLAALNLLGTQSSNNWAIAPQRSRSGKSLLASDSHGPLAAPSLWSFVQIRAPKYQAAGVTVAGLPMVLGGF NGKVAWSLTSVLGDNQDLFLEKIRRQGSSLTYEVNGKWQPVAVRNETYFVKGQRPIREAVYETRHGALLNSTQAAAQGTG FGLALQTPSFTDDKSLDAFFDLSRAQNVERASDATREIRAIALNLVFADASNIGWQVTGRFPNRREGEGLLPSPGWEGRY DWDGYADPMLHPYDQDPAQGWLGTANQRVIPHGYGMQLSNSWAAPERGERLAELAGSGKHDSRSVIAMQYDQTTTFAAKL KKMFEAPGMAQPLKQAIDALPEAERSKAREAYTRLMAFDGKLSPTSADAAIYELFLQESMKQIFLDELGPQNSPAWKAFI ANGDLSYAAQADHLLGREDSPFWDDARTPQKEDKPAILARSLAAAISAGDSQLGGDRRAWQWGKLHRYEWKNANGQSVRG PIAAGGDHTTLNTAAFAWGQDFNTTRAPSMRFIVDFGQSEPLMGQNGTGQSGNPVSPNYLNGIDPWLKGQYIGLPMQPQN FDRVYGKTRLTLTPGK >Mature_815_residues ASPALSHFLPRFGVAAAVAGVLSLTGCQTWNAQDTLPPTSGVQPLKGLAQNVSVRRNAMGMPLIESNSFHDALFALGYVH ASDRINQMVTLRLLAQGRLAEMSGSSMLDADRYMRAVNLKKSAGELYKASSPRLKRFFEVYARGVNAYLFRYADKLPGDL ASSGYKPEYWKPEDSALIFCLLNFSQSANLPEEIASLVLAQTVTNDKLAWLTPSAPDENLPLAEADKLQGIKLNGQIPGL TELSNASEQLAALNLLGTQSSNNWAIAPQRSRSGKSLLASDSHGPLAAPSLWSFVQIRAPKYQAAGVTVAGLPMVLGGFN GKVAWSLTSVLGDNQDLFLEKIRRQGSSLTYEVNGKWQPVAVRNETYFVKGQRPIREAVYETRHGALLNSTQAAAQGTGF GLALQTPSFTDDKSLDAFFDLSRAQNVERASDATREIRAIALNLVFADASNIGWQVTGRFPNRREGEGLLPSPGWEGRYD WDGYADPMLHPYDQDPAQGWLGTANQRVIPHGYGMQLSNSWAAPERGERLAELAGSGKHDSRSVIAMQYDQTTTFAAKLK KMFEAPGMAQPLKQAIDALPEAERSKAREAYTRLMAFDGKLSPTSADAAIYELFLQESMKQIFLDELGPQNSPAWKAFIA NGDLSYAAQADHLLGREDSPFWDDARTPQKEDKPAILARSLAAAISAGDSQLGGDRRAWQWGKLHRYEWKNANGQSVRGP IAAGGDHTTLNTAAFAWGQDFNTTRAPSMRFIVDFGQSEPLMGQNGTGQSGNPVSPNYLNGIDPWLKGQYIGLPMQPQNF DRVYGKTRLTLTPGK
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUIP_PSEPF (Q3KH00)
Other databases:
- EMBL: CP000094 - RefSeq: YP_346945.1 - ProteinModelPortal: Q3KH00 - SMR: Q3KH00 - STRING: Q3KH00 - GeneID: 3717062 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_1213 - eggNOG: COG2366 - HOGENOM: HBG336276 - OMA: HPYDQDP - ProtClustDB: CLSK866295 - BioCyc: PFLU205922:PFL_1213-MONOMER - InterPro: IPR014395 - InterPro: IPR002692 - PIRSF: PIRSF001227
Pfam domain/function: PF01804 Penicil_amidase
EC number: =3.5.1.97
Molecular weight: Translated: 89026; Mature: 88895
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: ACT_SITE 262-262
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPALSHFLPRFGVAAAVAGVLSLTGCQTWNAQDTLPPTSGVQPLKGLAQNVSVRRNAM CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC GMPLIESNSFHDALFALGYVHASDRINQMVTLRLLAQGRLAEMSGSSMLDADRYMRAVNL CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCC KKSAGELYKASSPRLKRFFEVYARGVNAYLFRYADKLPGDLASSGYKPEYWKPEDSALIF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEE CLLNFSQSANLPEEIASLVLAQTVTNDKLAWLTPSAPDENLPLAEADKLQGIKLNGQIPG EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHCCCCEEECCCCCC LTELSNASEQLAALNLLGTQSSNNWAIAPQRSRSGKSLLASDSHGPLAAPSLWSFVQIRA HHHHCCHHHHHHHHHHEECCCCCCEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHEEEC PKYQAAGVTVAGLPMVLGGFNGKVAWSLTSVLGDNQDLFLEKIRRQGSSLTYEVNGKWQP CCCCCCCEEEECCHHEEECCCCEEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEECCEEEE VAVRNETYFVKGQRPIREAVYETRHGALLNSTQAAAQGTGFGLALQTPSFTDDKSLDAFF EEEECCEEEEECCCHHHHHHHHHHCCCHHCCHHHHHCCCCCEEEECCCCCCCCCCHHHHH DLSRAQNVERASDATREIRAIALNLVFADASNIGWQVTGRFPNRREGEGLLPSPGWEGRY HHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC DWDGYADPMLHPYDQDPAQGWLGTANQRVIPHGYGMQLSNSWAAPERGERLAELAGSGKH CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCHHHHHHHHHHCCCCC DSRSVIAMQYDQTTTFAAKLKKMFEAPGMAQPLKQAIDALPEAERSKAREAYTRLMAFDG CCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC KLSPTSADAAIYELFLQESMKQIFLDELGPQNSPAWKAFIANGDLSYAAQADHLLGREDS CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCC PFWDDARTPQKEDKPAILARSLAAAISAGDSQLGGDRRAWQWGKLHRYEWKNANGQSVRG CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCC PIAAGGDHTTLNTAAFAWGQDFNTTRAPSMRFIVDFGQSEPLMGQNGTGQSGNPVSPNYL CCCCCCCCCEECCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC NGIDPWLKGQYIGLPMQPQNFDRVYGKTRLTLTPGK CCCCHHHCCCEECCCCCCCCHHHHHCCEEEEECCCC >Mature Secondary Structure ASPALSHFLPRFGVAAAVAGVLSLTGCQTWNAQDTLPPTSGVQPLKGLAQNVSVRRNAM CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC GMPLIESNSFHDALFALGYVHASDRINQMVTLRLLAQGRLAEMSGSSMLDADRYMRAVNL CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCC KKSAGELYKASSPRLKRFFEVYARGVNAYLFRYADKLPGDLASSGYKPEYWKPEDSALIF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEE CLLNFSQSANLPEEIASLVLAQTVTNDKLAWLTPSAPDENLPLAEADKLQGIKLNGQIPG EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHCCCCEEECCCCCC LTELSNASEQLAALNLLGTQSSNNWAIAPQRSRSGKSLLASDSHGPLAAPSLWSFVQIRA HHHHCCHHHHHHHHHHEECCCCCCEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHEEEC PKYQAAGVTVAGLPMVLGGFNGKVAWSLTSVLGDNQDLFLEKIRRQGSSLTYEVNGKWQP CCCCCCCEEEECCHHEEECCCCEEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEECCEEEE VAVRNETYFVKGQRPIREAVYETRHGALLNSTQAAAQGTGFGLALQTPSFTDDKSLDAFF EEEECCEEEEECCCHHHHHHHHHHCCCHHCCHHHHHCCCCCEEEECCCCCCCCCCHHHHH DLSRAQNVERASDATREIRAIALNLVFADASNIGWQVTGRFPNRREGEGLLPSPGWEGRY HHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC DWDGYADPMLHPYDQDPAQGWLGTANQRVIPHGYGMQLSNSWAAPERGERLAELAGSGKH CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCHHHHHHHHHHCCCCC DSRSVIAMQYDQTTTFAAKLKKMFEAPGMAQPLKQAIDALPEAERSKAREAYTRLMAFDG CCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC KLSPTSADAAIYELFLQESMKQIFLDELGPQNSPAWKAFIANGDLSYAAQADHLLGREDS CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCC PFWDDARTPQKEDKPAILARSLAAAISAGDSQLGGDRRAWQWGKLHRYEWKNANGQSVRG CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCC PIAAGGDHTTLNTAAFAWGQDFNTTRAPSMRFIVDFGQSEPLMGQNGTGQSGNPVSPNYL CCCCCCCCCEECCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC NGIDPWLKGQYIGLPMQPQNFDRVYGKTRLTLTPGK CCCCHHHCCCEECCCCCCCCHHHHHCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA