Click here to switch to the map view.

The map label for this gene is lhr [C]

Identifier: 77457432

GI number: 77457432

Start: 1375639

End: 1378128

Strand: Reverse

Name: lhr [C]

Synonym: Pfl01_1205

Alternate gene names: 77457432

Gene position: 1378128-1375639 (Counterclockwise)

Preceding gene: 77457433

Following gene: 77457431

Centisome position: 21.4

GC content: 63.94

Gene sequence:

>2490_bases
ATGGGCACTTCCACCGACTTCGCCAAACACTGGTTCAGCGCCCGCGACTGGAAGCCGTTCGCCTTTCAAAAACAGGTGTG
GGCCGCAGTCAAACGGGGCGAGTCCGGCCTGCTGCACGCCAGTACCGGCGCCGGTAAAACCTACGCGGTGTGGTTTGCCG
CGCTCAATCGGTTTGCCCGCTCCAGGCCTGCTGCTGAAACCACCCGCAAACGCCCACCGCCCGCCGAACCGCTGACTGTC
TTGTGGATCACCCCGATGCGCGCGCTGGCTGCCGACACCGCGCGCGCCCTGCAATCGCCGCTGGACGATCTGCAGATTCC
CTGGAGCGTCGGCCTGCGCACCGGCGACACCGGCAGCAGCGAACGCGCCCGGCAGAACCGGCGCCTGCCCACCACGCTGA
TCACCACCCCGGAAAGCCTGACCCTGATGCTCGCCCGGGCCGACGCGCAAACGGCGCTGTCGACGCTGCGTATGGTCGTG
GTGGATGAGTGGCACGAATTGCTCGGCAACAAGCGCGGCGTGCAATTGCAACTGGCCCTCGCCCGGTTGCGCCGCTGGCA
TCCGGGGCTGATCGTCTGGGGCGTTTCCGCGACGCTCGGCAATCAGTCCCACGCCGAACAGGTGCTGATCCCACAGGGCG
GCGGCGTGAGTATTCAGGGGCAAAGCGAAAAGTCGCTCAAGGTCGACACCTTGCTTCCACCGGCCATCGAACGCTTTCCC
TGGGCCGGGCATATCGGCTTGAAGATGTTGCCGCAGGTGGTCGCCGAACTGGACGTCTGCACCAGCAGCCTGGTGTTCAC
CAACACCCGGGCGCAATCGGAAATCTGGTATCAGGCCTTGCTGGAAGCGCGGCCGGACTGGGCCGGTTTGATTGCCCTGC
ACCACAGCTCTCTGTCCCGCGACACCCGCGACTGGGTCGAGCAGGCGCTGAAGAACGGTCAACTCAAAGCCGTGGTCTGC
ACTTCAAGCCTGGATCTGGGGGTGGATTTCCTGCCGGTGGAGCGGGTGCTGCAAATTGGCTCGGCCAAAGGCGTGGCGCG
ACTGATGCAGCGTGCCGGGCGTTCGGGGCATGCGCCCGGTAGAACGTCACGGGTCACCCTGGTGCCAACCCACAGCCTGG
AGCTGATCGAAGCCGCGGCCGCTGGCGATGCCGTGGCGCAGCGGCGGATCGAACCGCGACTGTCACCGCACAAACCGCTG
GATGTGCTGGTGCAGCATCTGGTCAGCATGGCCCTGGGCGGTGGCTTTGTTCCCGATGAGCTGTACGAAGAAGTCCGTGG
TGCCTGGGCCTATCGCGACCTGACACCAGCAGACTGGGCCTGGGCGCTGGCGTTCGTACGCCACGGCGGGATGTCGCTGA
CGGCTTACCCGGATTACCGCCGGGTCGAGCCGGATGAGCACGGGATCTGGCGCGTTCCCGATGCGCGACTGGCGCGCCGC
CATCGCATGAGCATCGGCACCATCGTCAGCGATGCCGCGATCCATTTGAAATTCTGGAGCAAGGGCGGAGGCGGCAAACA
GCTGGGCAGCGTTGAAGAGGGCTTTATCGCCCGCCTCAAGCCCGGCGACGGTTTTCTGTTCGCCGGGCGCTTGCTGGAAC
TGGTGCGAGTGGAAAACATGACCGCCTACGTCAAACGCAGTACCGCGAAAAAAGCCGCCGTACCGCGCTGGAATGGCGGG
CGCATGCCGCTCTCCAATGAATTGGCCGAAGCCGTGGTCAGCCGCTTCAGCGCGGCGGCACACGGTGAGTTTGCCGGCCC
GGAAATGCACGCCTTGCGCCCGCTGCTGGAAATACAGATGCGCTGGTCGGGCCTGCCGACAGACAACAACCTGCTGGCTG
AAGTGCTGAAATCCCGCGAAGGCTGGCACCTTTTCCTCTTCCCGTTTGCCGGACGTCAGGTGCATCTTGGGCTGGCCAGC
CTGCTGGCATGGCGGGTCAGTCAGCGCCTGCCTGTGACCTTCTCGATTGCGGTAAACGATTACGGACTGGAACTGCTCAG
CGCCACGCCCGTTGACTGGTCCGTGCAACTGGATGGCGCGCTGCTCAGCCCTGGGGATTTATTGAGAGACGTGCTGGCCA
GCCTCAATGCGGGCGAACTGGCGCTGCGCAGGTTTCGGGAAATTGCGCGGATTGCCGGCCTGGTGTTCGCCGGCTACCCC
GGCGCGCCGAAAAGTACACGTCAGGTGCAGGCCTCCAGCGGGCTGTTTTTCGAAGTGTTCAAACAATACGACGCCGACAA
CCTGCTGCTGGCCCAGGCCGGGGAAGAAGTCCTGCGGGAAGAACTGGATATTCGTCGACTTGAACAGACATTGGAGCGGA
TCAATCGGATGAAACTGGACATGCACTTGATCAAACGTCCGACACCGCTCGGCTTTCCATTGCTGGTGGAGCGCATGCGC
GAAAGCATGAGTTCGGAAAAACTTGCCGACCGGATCCGGCGCATGGTCGGCGATCTGGAGAAAACCGCCGACAAGGGCCA
ATCCCGATGA

Upstream 100 bases:

>100_bases
GCGAACGCCTGAAACAATTCCTCAGCGGCAATCTCAAGTAAAACTATTGCCCGGCCGGCGCGGTCATTGAAGGAACACCT
TCAGAGCACACGTCGCCGGC

Downstream 100 bases:

>100_bases
ATGCGCCCTACCCCGTGCGTCTGGCAGGCGAAGAACTCTGGTTGCTGCCGGAAAAGGCGCTGTACTGGCCGGCGCAACAG
GCGCTGCTGATTGCCGACGT

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 829; Mature: 828

Protein sequence:

>829_residues
MGTSTDFAKHWFSARDWKPFAFQKQVWAAVKRGESGLLHASTGAGKTYAVWFAALNRFARSRPAAETTRKRPPPAEPLTV
LWITPMRALAADTARALQSPLDDLQIPWSVGLRTGDTGSSERARQNRRLPTTLITTPESLTLMLARADAQTALSTLRMVV
VDEWHELLGNKRGVQLQLALARLRRWHPGLIVWGVSATLGNQSHAEQVLIPQGGGVSIQGQSEKSLKVDTLLPPAIERFP
WAGHIGLKMLPQVVAELDVCTSSLVFTNTRAQSEIWYQALLEARPDWAGLIALHHSSLSRDTRDWVEQALKNGQLKAVVC
TSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRTSRVTLVPTHSLELIEAAAAGDAVAQRRIEPRLSPHKPL
DVLVQHLVSMALGGGFVPDELYEEVRGAWAYRDLTPADWAWALAFVRHGGMSLTAYPDYRRVEPDEHGIWRVPDARLARR
HRMSIGTIVSDAAIHLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENMTAYVKRSTAKKAAVPRWNGG
RMPLSNELAEAVVSRFSAAAHGEFAGPEMHALRPLLEIQMRWSGLPTDNNLLAEVLKSREGWHLFLFPFAGRQVHLGLAS
LLAWRVSQRLPVTFSIAVNDYGLELLSATPVDWSVQLDGALLSPGDLLRDVLASLNAGELALRRFREIARIAGLVFAGYP
GAPKSTRQVQASSGLFFEVFKQYDADNLLLAQAGEEVLREELDIRRLEQTLERINRMKLDMHLIKRPTPLGFPLLVERMR
ESMSSEKLADRIRRMVGDLEKTADKGQSR

Sequences:

>Translated_829_residues
MGTSTDFAKHWFSARDWKPFAFQKQVWAAVKRGESGLLHASTGAGKTYAVWFAALNRFARSRPAAETTRKRPPPAEPLTV
LWITPMRALAADTARALQSPLDDLQIPWSVGLRTGDTGSSERARQNRRLPTTLITTPESLTLMLARADAQTALSTLRMVV
VDEWHELLGNKRGVQLQLALARLRRWHPGLIVWGVSATLGNQSHAEQVLIPQGGGVSIQGQSEKSLKVDTLLPPAIERFP
WAGHIGLKMLPQVVAELDVCTSSLVFTNTRAQSEIWYQALLEARPDWAGLIALHHSSLSRDTRDWVEQALKNGQLKAVVC
TSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRTSRVTLVPTHSLELIEAAAAGDAVAQRRIEPRLSPHKPL
DVLVQHLVSMALGGGFVPDELYEEVRGAWAYRDLTPADWAWALAFVRHGGMSLTAYPDYRRVEPDEHGIWRVPDARLARR
HRMSIGTIVSDAAIHLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENMTAYVKRSTAKKAAVPRWNGG
RMPLSNELAEAVVSRFSAAAHGEFAGPEMHALRPLLEIQMRWSGLPTDNNLLAEVLKSREGWHLFLFPFAGRQVHLGLAS
LLAWRVSQRLPVTFSIAVNDYGLELLSATPVDWSVQLDGALLSPGDLLRDVLASLNAGELALRRFREIARIAGLVFAGYP
GAPKSTRQVQASSGLFFEVFKQYDADNLLLAQAGEEVLREELDIRRLEQTLERINRMKLDMHLIKRPTPLGFPLLVERMR
ESMSSEKLADRIRRMVGDLEKTADKGQSR
>Mature_828_residues
GTSTDFAKHWFSARDWKPFAFQKQVWAAVKRGESGLLHASTGAGKTYAVWFAALNRFARSRPAAETTRKRPPPAEPLTVL
WITPMRALAADTARALQSPLDDLQIPWSVGLRTGDTGSSERARQNRRLPTTLITTPESLTLMLARADAQTALSTLRMVVV
DEWHELLGNKRGVQLQLALARLRRWHPGLIVWGVSATLGNQSHAEQVLIPQGGGVSIQGQSEKSLKVDTLLPPAIERFPW
AGHIGLKMLPQVVAELDVCTSSLVFTNTRAQSEIWYQALLEARPDWAGLIALHHSSLSRDTRDWVEQALKNGQLKAVVCT
SSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRTSRVTLVPTHSLELIEAAAAGDAVAQRRIEPRLSPHKPLD
VLVQHLVSMALGGGFVPDELYEEVRGAWAYRDLTPADWAWALAFVRHGGMSLTAYPDYRRVEPDEHGIWRVPDARLARRH
RMSIGTIVSDAAIHLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENMTAYVKRSTAKKAAVPRWNGGR
MPLSNELAEAVVSRFSAAAHGEFAGPEMHALRPLLEIQMRWSGLPTDNNLLAEVLKSREGWHLFLFPFAGRQVHLGLASL
LAWRVSQRLPVTFSIAVNDYGLELLSATPVDWSVQLDGALLSPGDLLRDVLASLNAGELALRRFREIARIAGLVFAGYPG
APKSTRQVQASSGLFFEVFKQYDADNLLLAQAGEEVLREELDIRRLEQTLERINRMKLDMHLIKRPTPLGFPLLVERMRE
SMSSEKLADRIRRMVGDLEKTADKGQSR

Specific function: Unknown

COG id: COG1201

COG function: function code R; Lhr-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787942, Length=887, Percent_Identity=27.5084554678692, Blast_Score=223, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR013701
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR017170 [H]

Pfam domain/function: PF00270 DEAD; PF08494 DEAD_assoc; PF00271 Helicase_C [H]

EC number: 3.6.1.-

Molecular weight: Translated: 91749; Mature: 91618

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTSTDFAKHWFSARDWKPFAFQKQVWAAVKRGESGLLHASTGAGKTYAVWFAALNRFAR
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHH
SRPAAETTRKRPPPAEPLTVLWITPMRALAADTARALQSPLDDLQIPWSVGLRTGDTGSS
CCCCHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHCCCCHHHCCCCCCCCCH
ERARQNRRLPTTLITTPESLTLMLARADAQTALSTLRMVVVDEWHELLGNKRGVQLQLAL
HHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ARLRRWHPGLIVWGVSATLGNQSHAEQVLIPQGGGVSIQGQSEKSLKVDTLLPPAIERFP
HHHHHCCCCEEEEEEEHHCCCCCCCCEEEEECCCCEEEECCCCCCEEECCCCCHHHHHCC
WAGHIGLKMLPQVVAELDVCTSSLVFTNTRAQSEIWYQALLEARPDWAGLIALHHSSLSR
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCHHHEEEEHHHHHCC
DTRDWVEQALKNGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPG
HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
RTSRVTLVPTHSLELIEAAAAGDAVAQRRIEPRLSPHKPLDVLVQHLVSMALGGGFVPDE
CCCEEEEEECCCHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
LYEEVRGAWAYRDLTPADWAWALAFVRHGGMSLTAYPDYRRVEPDEHGIWRVPDARLARR
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHH
HRMSIGTIVSDAAIHLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENM
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHH
TAYVKRSTAKKAAVPRWNGGRMPLSNELAEAVVSRFSAAAHGEFAGPEMHALRPLLEIQM
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RWSGLPTDNNLLAEVLKSREGWHLFLFPFAGRQVHLGLASLLAWRVSQRLPVTFSIAVND
HHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCEEEEEEECC
YGLELLSATPVDWSVQLDGALLSPGDLLRDVLASLNAGELALRRFREIARIAGLVFAGYP
CCEEEEECCCCCEEEEECCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
GAPKSTRQVQASSGLFFEVFKQYDADNLLLAQAGEEVLREELDIRRLEQTLERINRMKLD
CCCCCCHHHHHCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHLIKRPTPLGFPLLVERMRESMSSEKLADRIRRMVGDLEKTADKGQSR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GTSTDFAKHWFSARDWKPFAFQKQVWAAVKRGESGLLHASTGAGKTYAVWFAALNRFAR
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHH
SRPAAETTRKRPPPAEPLTVLWITPMRALAADTARALQSPLDDLQIPWSVGLRTGDTGSS
CCCCHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHCCCCHHHCCCCCCCCCH
ERARQNRRLPTTLITTPESLTLMLARADAQTALSTLRMVVVDEWHELLGNKRGVQLQLAL
HHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ARLRRWHPGLIVWGVSATLGNQSHAEQVLIPQGGGVSIQGQSEKSLKVDTLLPPAIERFP
HHHHHCCCCEEEEEEEHHCCCCCCCCEEEEECCCCEEEECCCCCCEEECCCCCHHHHHCC
WAGHIGLKMLPQVVAELDVCTSSLVFTNTRAQSEIWYQALLEARPDWAGLIALHHSSLSR
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCHHHEEEEHHHHHCC
DTRDWVEQALKNGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPG
HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
RTSRVTLVPTHSLELIEAAAAGDAVAQRRIEPRLSPHKPLDVLVQHLVSMALGGGFVPDE
CCCEEEEEECCCHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
LYEEVRGAWAYRDLTPADWAWALAFVRHGGMSLTAYPDYRRVEPDEHGIWRVPDARLARR
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHH
HRMSIGTIVSDAAIHLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENM
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHH
TAYVKRSTAKKAAVPRWNGGRMPLSNELAEAVVSRFSAAAHGEFAGPEMHALRPLLEIQM
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RWSGLPTDNNLLAEVLKSREGWHLFLFPFAGRQVHLGLASLLAWRVSQRLPVTFSIAVND
HHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCEEEEEEECC
YGLELLSATPVDWSVQLDGALLSPGDLLRDVLASLNAGELALRRFREIARIAGLVFAGYP
CCEEEEECCCCCEEEEECCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
GAPKSTRQVQASSGLFFEVFKQYDADNLLLAQAGEEVLREELDIRRLEQTLERINRMKLD
CCCCCCHHHHHCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHLIKRPTPLGFPLLVERMRESMSSEKLADRIRRMVGDLEKTADKGQSR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]