| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is yffB [C]
Identifier: 77457321
GI number: 77457321
Start: 1265962
End: 1266303
Strand: Reverse
Name: yffB [C]
Synonym: Pfl01_1094
Alternate gene names: 77457321
Gene position: 1266303-1265962 (Counterclockwise)
Preceding gene: 77457323
Following gene: 77457320
Centisome position: 19.67
GC content: 57.31
Gene sequence:
>342_bases TTGCACCTTTTCGGCATCAAAGCCTGCGACACCATGAAAAAGGCGCGCACCTGGCTCGATGAACACGCTGTCAGCTATGA CTTCCACGATTACAAGACCGCCGGCATTGACCGCGAGCACCTGACCCAATGGTGCGACGAACATGGCTGGCAAACGGTGT TGAACCGCGCAGGCACGACCTTTCGCAAACTCGACGACGAACGCAAAGCCGATCTCGACCAGTCGAAAGCCATCGAACTG ATGCTCGCTCAACCCTCGATGATCAAGCGCCCGGTGCTCGATCTCGGTGACCGAACCCTGATTGGCTTCAAGCCAGACAT CTACGCGGCCGCCCTCAAGTAA
Upstream 100 bases:
>100_bases ACCTCGGCGCCGCGAAACCGTCTGGTCATGGCATAATCCGACACCATTTTTTTCCAGCACCTGTAAAGGGGGCAATTCCT TGACCGTTTCAAGCAAAACG
Downstream 100 bases:
>100_bases GCAGCCCGTCACATTTTGTAGAGGTATTCACATGTCCAACTCCCTGTTCAGTATCGCCTTCGGCGTCGGCACCCAGAACC GTCAAGGCGCATGGCTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MHLFGIKACDTMKKARTWLDEHAVSYDFHDYKTAGIDREHLTQWCDEHGWQTVLNRAGTTFRKLDDERKADLDQSKAIEL MLAQPSMIKRPVLDLGDRTLIGFKPDIYAAALK
Sequences:
>Translated_113_residues MHLFGIKACDTMKKARTWLDEHAVSYDFHDYKTAGIDREHLTQWCDEHGWQTVLNRAGTTFRKLDDERKADLDQSKAIEL MLAQPSMIKRPVLDLGDRTLIGFKPDIYAAALK >Mature_113_residues MHLFGIKACDTMKKARTWLDEHAVSYDFHDYKTAGIDREHLTQWCDEHGWQTVLNRAGTTFRKLDDERKADLDQSKAIEL MLAQPSMIKRPVLDLGDRTLIGFKPDIYAAALK
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788815, Length=108, Percent_Identity=45.3703703703704, Blast_Score=99, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13035; Mature: 13035
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLFGIKACDTMKKARTWLDEHAVSYDFHDYKTAGIDREHLTQWCDEHGWQTVLNRAGTT CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCH FRKLDDERKADLDQSKAIELMLAQPSMIKRPVLDLGDRTLIGFKPDIYAAALK HHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCHHHHCCC >Mature Secondary Structure MHLFGIKACDTMKKARTWLDEHAVSYDFHDYKTAGIDREHLTQWCDEHGWQTVLNRAGTT CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCH FRKLDDERKADLDQSKAIELMLAQPSMIKRPVLDLGDRTLIGFKPDIYAAALK HHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]