| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457313
Identifier: 77457313
GI number: 77457313
Start: 1256942
End: 1257319
Strand: Reverse
Name: 77457313
Synonym: Pfl01_1086
Alternate gene names: NA
Gene position: 1257319-1256942 (Counterclockwise)
Preceding gene: 77457314
Following gene: 77457311
Centisome position: 19.53
GC content: 63.76
Gene sequence:
>378_bases ATGCGCCAACCGGACATCGAGATTTACCTGAAAGACGCCGACGTCGACCACAAGGCCATTTCCGCCTGGCTGGGCGCCGC CCTCGGCCCGTGCAGCGACTGGGTACAGAAAGGCCAGACCTGGAAGTGCAAGGCCGGCAACATCCCGGTGACCTGGCTGC CGAAAGCCGTAGGCAAGTGGAACAGCCTGTACCTGGAAAGCGATGCGACCCCTTGGGACGACGACATCGCCTGCGCCCGC GCAGCCTTTGCCGCGCTGAACGTCGAAGTGCGCTGCGCGCCGGGGACGTGGGTCGAGGAAGAAGGTGAGGAGACGGCGGA TCGCTGGATCCGGATCAGCGCCGATGGTGAAGAAGAGATCACCTGGAAAACTGCCTGA
Upstream 100 bases:
>100_bases CTACGATTATTTCGTTCTTCAATAACTTTTGGACTCGGGCGAGTGCCCGGGGCCGGCTAAATCCGCGAATGGATTTTTCA GACCCGCAGTGAGGATATCC
Downstream 100 bases:
>100_bases CGCTGATCGCTTGATCGTTCCCACGCTGCGCGTGGGAACGATCAGCTCGAAGTTGGCTTACAGACCTACAACGTCTTCAG CCTGCAACCCCTTCTGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MRQPDIEIYLKDADVDHKAISAWLGAALGPCSDWVQKGQTWKCKAGNIPVTWLPKAVGKWNSLYLESDATPWDDDIACAR AAFAALNVEVRCAPGTWVEEEGEETADRWIRISADGEEEITWKTA
Sequences:
>Translated_125_residues MRQPDIEIYLKDADVDHKAISAWLGAALGPCSDWVQKGQTWKCKAGNIPVTWLPKAVGKWNSLYLESDATPWDDDIACAR AAFAALNVEVRCAPGTWVEEEGEETADRWIRISADGEEEITWKTA >Mature_125_residues MRQPDIEIYLKDADVDHKAISAWLGAALGPCSDWVQKGQTWKCKAGNIPVTWLPKAVGKWNSLYLESDATPWDDDIACAR AAFAALNVEVRCAPGTWVEEEGEETADRWIRISADGEEEITWKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13921; Mature: 13921
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPDIEIYLKDADVDHKAISAWLGAALGPCSDWVQKGQTWKCKAGNIPVTWLPKAVGKW CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCEEECCCCCCCC NSLYLESDATPWDDDIACARAAFAALNVEVRCAPGTWVEEEGEETADRWIRISADGEEEI CEEEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCE TWKTA EEECC >Mature Secondary Structure MRQPDIEIYLKDADVDHKAISAWLGAALGPCSDWVQKGQTWKCKAGNIPVTWLPKAVGKW CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCEEECCCCCCCC NSLYLESDATPWDDDIACARAAFAALNVEVRCAPGTWVEEEGEETADRWIRISADGEEEI CEEEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCE TWKTA EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA