| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is plsB [H]
Identifier: 77457311
GI number: 77457311
Start: 1253933
End: 1256437
Strand: Reverse
Name: plsB [H]
Synonym: Pfl01_1084
Alternate gene names: 77457311
Gene position: 1256437-1253933 (Counterclockwise)
Preceding gene: 77457313
Following gene: 77457310
Centisome position: 19.51
GC content: 62.12
Gene sequence:
>2505_bases ATGACCCGTTCCCCGTTCCGCCGTCTTGTGTTTGGCACCTTGCGCCGACTGTTGTATCTCTGGGTTCGCTCCGAGACGAT CAACCAGTCGTCGTTCACCCTCAACCTAGACCGCAGTCGTCCGGTGTTCTACGTCCTGCAAAACCCATCGCTGACTGATC TGGCGGTGGTCGACACCGAGTGCACCAAGGCCGGTCTGCCGCGCCCGGTGCTGCCGGTGTCCGTGGGTTCGCTGATCGAA CCCGCGGCGTTCTTCTACCTGACGCCGGACCCGGACTGGCTCGGCCGCCAGGACAAGCGCGGCGCGCCGCCGACCCTGAC CCGCCTGGTCAGCGCCCTGAGCCAGAACGCTGCCGAAGATGCACAGATCATTCCGGTCAGCGTGTTCTGGGGCCAGTCGC CGGACAGCGAGAACAGCCCATGGAAACTGCTGTTCGCCGACAGCTGGGCCGTCACCGGACGCCTGCGCCGGCTGCTGAGC ATCATGATTCTGGGGCGCAAGACCCGCGTGCAGTTCTCCGCACCGATCCACCTGCGCGAACTGATCGAACACAACAAGGG CCACGAACGCACCGTGCGCATGGCCCAGCGGATCCTGCGGGTGCACTTCCGCAACCTGAAAGCTGCGGTGATCGGCCCGG ACATTTCCCACCGCCGCAACCTGGTCAAAGGCCTGCTCAACCAGCCGCTGGTCAAGCAAGCGATCCTCGACGAAGCCGAG CGCGAAAACATCTCCCCGGAAAAAGCCAAGGCCCAGGCCCTGCGCTATGGCAACGAGATCGCCTCGGACTACACCTACAC CGCGATCCGTTTTCTGGAAGTCGTACTGAGCTGGTTCTGGAACAAGATCTACGACGGGATCAAGGTCAACCACATCGAAG GCGTGCAGAAGGTCGCCCAGGGTCACGAAGTGATCTACGTGCCGTGCCACCGCAGCCATATCGACTATCTGCTGCTGTCG TACCTACTGTTCCGCAACGGCCTGACCCCGCCGCACATCGCCGCCGGAATCAACCTGAACATGCCGGTGATCGGCAGTCT GCTGCGCCGTGGCGGGGCGTTTTTCATGCGCCGCACGTTCAAGGGCAATCCGCTGTACACCTCGGTGTTCAACGAATACC TGCACACCCTGTTCACCAAAGGTTTCCCGGTCGAGTACTTCGTCGAAGGCGGGCGCTCGCGTACCGGGCGCATGCTGCAA CCGAAAACCGGGATGCTGGCGATCACCCTGCGCAGTTTCCTGCGTTCGTCGCGGATGCCGATCGTGTTCGTGCCGGTGTA CATCGGTTATGAGCGCGTGCTCGAAGGCCGCACCTACCTCGGCGAACTGCGCGGCGCGAGCAAGAAGAAAGAATCGATCT TCGACATCTTCAAAGTCATCGGCGCGCTCAAGCAGCGCTTCGGCCAGGTGGCGGTGAACTTCGGCGAGCCGATCAAACTG GCGGAATTCCTCGACAGTGAACAACCAGGCTGGCGCCAGCAGGAACTGGGCCCGCAGTTCAAACCGGCGTGGCTCAACGA AACTACCAACCGCCTCGGCGAAAAAGTCGCGCAGCACCTGAACGAAGCGGCGGCGATCAACCCGGTCAACCTGGTGGCGC TGGCGCTGCTGTCGACCACCCGCCTGGCACTGGATGATCGGGCCATGGCGCGGGTGCTGGATCTGTATCTGGCGCTGCTG CGCAAGGTTCCGTATTCGCCGCACACCACCTTGCCGGAAGGCGATGGCCGCGCGTTGATCGAGCATGTGAAGGACATGGA TCTGCTGTCCGAGCAGAACGATGCGCTGGGCAAGATTCTGTACCTGGACGAGCAGAACGCCGTCCTGATGACCTATTACC GCAACAACGTGCTGCACATCTTCGCCCTGCCGGCGCTGCTGGCGAGCTTCTTCCAGAGCACCTCGCGCATGAGCCGCGAA CAGATCCTGCGCTACACCCGCGCGCTGTATCCGTATCTGCAATCGGAACTGTTCATCCGCTGGACCCTGGACGAACTGGA TGCAGTCATCGATCAGTGGCTGGAAGCGTTCGTCGAACAAGGCCTGCTGCGTTTCGAGAAAGACGTGTACCTGCGCCCGG CACCAAGCTCGCGGCATTTCGTGCTGCTGACCCTGCTGTCGAAGAGCATTGCCCAGACCCTGCAACGCTTCTACATGACG GTTTCACTGCTGCTCAACAGCGGCCAGAACAGCATCAGCGCCGAAGAACTGGAAGACTTGTGCACGGTCATGGCCCAGCG CCTGTCGATCCTGCATGGCCTGAACGCGCCGGAATTCTTCGACAAGAGCCTGTTCCGCCACTTCATCCAGACCCTGCTCG ACCTCGACGTGCTGCGTCGCGACGAAGCCGGCAAGTTGAGCTACCACGAACTGCTCGGCGAACTGGCCGAGGGTGCGGCC AAACGGGTGTTGCCGGCGGAGATTCGCCTGTCGATCCGTCAGGTAGCCCTGCATCGCAGCGAAGATGCGGCCGATCAGGT CGCCCCCCCTGTGCAAAACGACTAA
Upstream 100 bases:
>100_bases AGGAGATTACTTCGCCGCTTTTTTGCCGATTTTCGAGTAATCCGGCAAACTGTCGCCCTCCCGAGCAAACGCTCGGTTTA TCCACTCACGCAGAAGCCGT
Downstream 100 bases:
>100_bases ATTCCTAAAGGCGCCAGGCTTCTTCTGGCGCCGTCGATACGGAGATCTGCGATGAAAAAACTTTCTCTGCTGGCCGCCGC CACCCTGCTCAGCGCCTGCC
Product: glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: GPAT [H]
Number of amino acids: Translated: 834; Mature: 833
Protein sequence:
>834_residues MTRSPFRRLVFGTLRRLLYLWVRSETINQSSFTLNLDRSRPVFYVLQNPSLTDLAVVDTECTKAGLPRPVLPVSVGSLIE PAAFFYLTPDPDWLGRQDKRGAPPTLTRLVSALSQNAAEDAQIIPVSVFWGQSPDSENSPWKLLFADSWAVTGRLRRLLS IMILGRKTRVQFSAPIHLRELIEHNKGHERTVRMAQRILRVHFRNLKAAVIGPDISHRRNLVKGLLNQPLVKQAILDEAE RENISPEKAKAQALRYGNEIASDYTYTAIRFLEVVLSWFWNKIYDGIKVNHIEGVQKVAQGHEVIYVPCHRSHIDYLLLS YLLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRTFKGNPLYTSVFNEYLHTLFTKGFPVEYFVEGGRSRTGRMLQ PKTGMLAITLRSFLRSSRMPIVFVPVYIGYERVLEGRTYLGELRGASKKKESIFDIFKVIGALKQRFGQVAVNFGEPIKL AEFLDSEQPGWRQQELGPQFKPAWLNETTNRLGEKVAQHLNEAAAINPVNLVALALLSTTRLALDDRAMARVLDLYLALL RKVPYSPHTTLPEGDGRALIEHVKDMDLLSEQNDALGKILYLDEQNAVLMTYYRNNVLHIFALPALLASFFQSTSRMSRE QILRYTRALYPYLQSELFIRWTLDELDAVIDQWLEAFVEQGLLRFEKDVYLRPAPSSRHFVLLTLLSKSIAQTLQRFYMT VSLLLNSGQNSISAEELEDLCTVMAQRLSILHGLNAPEFFDKSLFRHFIQTLLDLDVLRRDEAGKLSYHELLGELAEGAA KRVLPAEIRLSIRQVALHRSEDAADQVAPPVQND
Sequences:
>Translated_834_residues MTRSPFRRLVFGTLRRLLYLWVRSETINQSSFTLNLDRSRPVFYVLQNPSLTDLAVVDTECTKAGLPRPVLPVSVGSLIE PAAFFYLTPDPDWLGRQDKRGAPPTLTRLVSALSQNAAEDAQIIPVSVFWGQSPDSENSPWKLLFADSWAVTGRLRRLLS IMILGRKTRVQFSAPIHLRELIEHNKGHERTVRMAQRILRVHFRNLKAAVIGPDISHRRNLVKGLLNQPLVKQAILDEAE RENISPEKAKAQALRYGNEIASDYTYTAIRFLEVVLSWFWNKIYDGIKVNHIEGVQKVAQGHEVIYVPCHRSHIDYLLLS YLLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRTFKGNPLYTSVFNEYLHTLFTKGFPVEYFVEGGRSRTGRMLQ PKTGMLAITLRSFLRSSRMPIVFVPVYIGYERVLEGRTYLGELRGASKKKESIFDIFKVIGALKQRFGQVAVNFGEPIKL AEFLDSEQPGWRQQELGPQFKPAWLNETTNRLGEKVAQHLNEAAAINPVNLVALALLSTTRLALDDRAMARVLDLYLALL RKVPYSPHTTLPEGDGRALIEHVKDMDLLSEQNDALGKILYLDEQNAVLMTYYRNNVLHIFALPALLASFFQSTSRMSRE QILRYTRALYPYLQSELFIRWTLDELDAVIDQWLEAFVEQGLLRFEKDVYLRPAPSSRHFVLLTLLSKSIAQTLQRFYMT VSLLLNSGQNSISAEELEDLCTVMAQRLSILHGLNAPEFFDKSLFRHFIQTLLDLDVLRRDEAGKLSYHELLGELAEGAA KRVLPAEIRLSIRQVALHRSEDAADQVAPPVQND >Mature_833_residues TRSPFRRLVFGTLRRLLYLWVRSETINQSSFTLNLDRSRPVFYVLQNPSLTDLAVVDTECTKAGLPRPVLPVSVGSLIEP AAFFYLTPDPDWLGRQDKRGAPPTLTRLVSALSQNAAEDAQIIPVSVFWGQSPDSENSPWKLLFADSWAVTGRLRRLLSI MILGRKTRVQFSAPIHLRELIEHNKGHERTVRMAQRILRVHFRNLKAAVIGPDISHRRNLVKGLLNQPLVKQAILDEAER ENISPEKAKAQALRYGNEIASDYTYTAIRFLEVVLSWFWNKIYDGIKVNHIEGVQKVAQGHEVIYVPCHRSHIDYLLLSY LLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRTFKGNPLYTSVFNEYLHTLFTKGFPVEYFVEGGRSRTGRMLQP KTGMLAITLRSFLRSSRMPIVFVPVYIGYERVLEGRTYLGELRGASKKKESIFDIFKVIGALKQRFGQVAVNFGEPIKLA EFLDSEQPGWRQQELGPQFKPAWLNETTNRLGEKVAQHLNEAAAINPVNLVALALLSTTRLALDDRAMARVLDLYLALLR KVPYSPHTTLPEGDGRALIEHVKDMDLLSEQNDALGKILYLDEQNAVLMTYYRNNVLHIFALPALLASFFQSTSRMSREQ ILRYTRALYPYLQSELFIRWTLDELDAVIDQWLEAFVEQGLLRFEKDVYLRPAPSSRHFVLLTLLSKSIAQTLQRFYMTV SLLLNSGQNSISAEELEDLCTVMAQRLSILHGLNAPEFFDKSLFRHFIQTLLDLDVLRRDEAGKLSYHELLGELAEGAAK RVLPAEIRLSIRQVALHRSEDAADQVAPPVQND
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family [H]
Homologues:
Organism=Homo sapiens, GI7657134, Length=415, Percent_Identity=32.5301204819277, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI190358539, Length=585, Percent_Identity=24.957264957265, Blast_Score=158, Evalue=2e-38, Organism=Escherichia coli, GI87082362, Length=831, Percent_Identity=38.8688327316486, Blast_Score=552, Evalue=1e-158, Organism=Caenorhabditis elegans, GI25147672, Length=340, Percent_Identity=34.1176470588235, Blast_Score=173, Evalue=4e-43, Organism=Caenorhabditis elegans, GI71988723, Length=506, Percent_Identity=26.4822134387352, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI71988728, Length=408, Percent_Identity=27.6960784313726, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI17864692, Length=313, Percent_Identity=34.185303514377, Blast_Score=172, Evalue=9e-43, Organism=Drosophila melanogaster, GI21357731, Length=542, Percent_Identity=26.7527675276753, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI24650752, Length=542, Percent_Identity=26.7527675276753, Blast_Score=152, Evalue=1e-36, Organism=Drosophila melanogaster, GI24650754, Length=542, Percent_Identity=26.7527675276753, Blast_Score=152, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR022284 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.15 [H]
Molecular weight: Translated: 94909; Mature: 94778
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSPFRRLVFGTLRRLLYLWVRSETINQSSFTLNLDRSRPVFYVLQNPSLTDLAVVDTE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEECH CTKAGLPRPVLPVSVGSLIEPAAFFYLTPDPDWLGRQDKRGAPPTLTRLVSALSQNAAED HHHCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC AQIIPVSVFWGQSPDSENSPWKLLFADSWAVTGRLRRLLSIMILGRKTRVQFSAPIHLRE CEEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH LIEHNKGHERTVRMAQRILRVHFRNLKAAVIGPDISHRRNLVKGLLNQPLVKQAILDEAE HHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHH RENISPEKAKAQALRYGNEIASDYTYTAIRFLEVVLSWFWNKIYDGIKVNHIEGVQKVAQ HCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHC GHEVIYVPCHRSHIDYLLLSYLLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRTF CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHCCCHHHHHHHC KGNPLYTSVFNEYLHTLFTKGFPVEYFVEGGRSRTGRMLQPKTGMLAITLRSFLRSSRMP CCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC IVFVPVYIGYERVLEGRTYLGELRGASKKKESIFDIFKVIGALKQRFGQVAVNFGEPIKL EEEEEHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH AEFLDSEQPGWRQQELGPQFKPAWLNETTNRLGEKVAQHLNEAAAINPVNLVALALLSTT HHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RLALDDRAMARVLDLYLALLRKVPYSPHTTLPEGDGRALIEHVKDMDLLSEQNDALGKIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE YLDEQNAVLMTYYRNNVLHIFALPALLASFFQSTSRMSREQILRYTRALYPYLQSELFIR EEECCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE WTLDELDAVIDQWLEAFVEQGLLRFEKDVYLRPAPSSRHFVLLTLLSKSIAQTLQRFYMT EEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH VSLLLNSGQNSISAEELEDLCTVMAQRLSILHGLNAPEFFDKSLFRHFIQTLLDLDVLRR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC DEAGKLSYHELLGELAEGAAKRVLPAEIRLSIRQVALHRSEDAADQVAPPVQND CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure TRSPFRRLVFGTLRRLLYLWVRSETINQSSFTLNLDRSRPVFYVLQNPSLTDLAVVDTE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEECH CTKAGLPRPVLPVSVGSLIEPAAFFYLTPDPDWLGRQDKRGAPPTLTRLVSALSQNAAED HHHCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC AQIIPVSVFWGQSPDSENSPWKLLFADSWAVTGRLRRLLSIMILGRKTRVQFSAPIHLRE CEEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH LIEHNKGHERTVRMAQRILRVHFRNLKAAVIGPDISHRRNLVKGLLNQPLVKQAILDEAE HHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHH RENISPEKAKAQALRYGNEIASDYTYTAIRFLEVVLSWFWNKIYDGIKVNHIEGVQKVAQ HCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHC GHEVIYVPCHRSHIDYLLLSYLLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRTF CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHCCCHHHHHHHC KGNPLYTSVFNEYLHTLFTKGFPVEYFVEGGRSRTGRMLQPKTGMLAITLRSFLRSSRMP CCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC IVFVPVYIGYERVLEGRTYLGELRGASKKKESIFDIFKVIGALKQRFGQVAVNFGEPIKL EEEEEHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH AEFLDSEQPGWRQQELGPQFKPAWLNETTNRLGEKVAQHLNEAAAINPVNLVALALLSTT HHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RLALDDRAMARVLDLYLALLRKVPYSPHTTLPEGDGRALIEHVKDMDLLSEQNDALGKIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE YLDEQNAVLMTYYRNNVLHIFALPALLASFFQSTSRMSREQILRYTRALYPYLQSELFIR EEECCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE WTLDELDAVIDQWLEAFVEQGLLRFEKDVYLRPAPSSRHFVLLTLLSKSIAQTLQRFYMT EEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH VSLLLNSGQNSISAEELEDLCTVMAQRLSILHGLNAPEFFDKSLFRHFIQTLLDLDVLRR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC DEAGKLSYHELLGELAEGAAKRVLPAEIRLSIRQVALHRSEDAADQVAPPVQND CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA