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The map label for this gene is yafK [C]

Identifier: 77457235

GI number: 77457235

Start: 1174431

End: 1174946

Strand: Reverse

Name: yafK [C]

Synonym: Pfl01_1008

Alternate gene names: 77457235

Gene position: 1174946-1174431 (Counterclockwise)

Preceding gene: 77457236

Following gene: 77457234

Centisome position: 18.25

GC content: 59.5

Gene sequence:

>516_bases
ATGCGCTGGTTGCTTGCCCTGTTCTGCCTGTCGTTCGTCACCGTCTCCCAAGCGTCATTCGTGACCACCGTGACGCCTTC
GAACACCCCGCTCATCGAAAAAGTACTGGTGCTCAAATCGGCCCATCAACTGCAGTTGATCGCCGACGGCAAGCCCCTCA
AGAGCTATCGCATTTCCCTGGGCAAAGGCGCGAAAAAAGGCCCGAAGCTGATTGAAGGCGACAAACGCACACCGGAAGGT
TTCTATTGGATCGACTGGCGCAAGACCAGCGAAAAATTCAACCTGTCGATGCACATCTCCTACCCGAACATCAGCGACTC
CGCCCGCGCCCGCCGCGAAGGCGTCGAGCCTGGCGGCATGATCATGATCCACGGCACGCCGGACTCCGAGGACAACCCCG
AACAACTGTTCCACACCCTGGACTGGACCGACGGCTGCATCGCCATGCGCAACGTCGACATGCGCGAAGTCTGGAACCTG
GTGCCGGACGGCACGATGATCGAAATCCGCCCCTGA

Upstream 100 bases:

>100_bases
TCGACGGCGGCCGGCCGATAACCGGCTGACGCAGACCGCGACAGCGCCTGCACACTATCTATAAATAAAGTATCTGCTTC
ATTTCTGGGGAATCGTTTCA

Downstream 100 bases:

>100_bases
TTCTGTCATCCAGGGAGCACGCTCCCGAGGGGCCTTAAAACGGCCCTTTCTCCTGACCATTGGTCGCCCGCAAAAAATAA
ATCAAAAAGATCGCAGCCTG

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRWLLALFCLSFVTVSQASFVTTVTPSNTPLIEKVLVLKSAHQLQLIADGKPLKSYRISLGKGAKKGPKLIEGDKRTPEG
FYWIDWRKTSEKFNLSMHISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMREVWNL
VPDGTMIEIRP

Sequences:

>Translated_171_residues
MRWLLALFCLSFVTVSQASFVTTVTPSNTPLIEKVLVLKSAHQLQLIADGKPLKSYRISLGKGAKKGPKLIEGDKRTPEG
FYWIDWRKTSEKFNLSMHISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMREVWNL
VPDGTMIEIRP
>Mature_171_residues
MRWLLALFCLSFVTVSQASFVTTVTPSNTPLIEKVLVLKSAHQLQLIADGKPLKSYRISLGKGAKKGPKLIEGDKRTPEG
FYWIDWRKTSEKFNLSMHISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMREVWNL
VPDGTMIEIRP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19332; Mature: 19332

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLLALFCLSFVTVSQASFVTTVTPSNTPLIEKVLVLKSAHQLQLIADGKPLKSYRISL
CHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEC
GKGAKKGPKLIEGDKRTPEGFYWIDWRKTSEKFNLSMHISYPNISDSARARREGVEPGGM
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCHHHHHHCCCCCCCE
IMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMREVWNLVPDGTMIEIRP
EEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MRWLLALFCLSFVTVSQASFVTTVTPSNTPLIEKVLVLKSAHQLQLIADGKPLKSYRISL
CHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEC
GKGAKKGPKLIEGDKRTPEGFYWIDWRKTSEKFNLSMHISYPNISDSARARREGVEPGGM
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCHHHHHHCCCCCCCE
IMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMREVWNLVPDGTMIEIRP
EEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA