| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457133
Identifier: 77457133
GI number: 77457133
Start: 1051676
End: 1053043
Strand: Direct
Name: 77457133
Synonym: Pfl01_0906
Alternate gene names: NA
Gene position: 1051676-1053043 (Clockwise)
Preceding gene: 77457132
Following gene: 77457134
Centisome position: 16.33
GC content: 62.21
Gene sequence:
>1368_bases ATGCGCAAGATGATTCTGCAATGCGGTGTCCTGGCCCTGAGCCTGCTGGCCGCCAACGTGATCGCGGCGGTGTCGCCGGA CGAAGCCAACAAGCTCGGCACCAGCCTGACACCGCTGGGGGCCGAGAAGGCCGGCAATGCCGACGGGTCGATTCCGGCCT GGACCGGCGGTATCCCGAAAAACGCCGGGGCGGTCGACAGCAAGGGCTTCCTGGCTGACCCGTTCGCCAGCGAAAAACCG CTGTTCACCATCACCGCCGCCAACGTCGACAAGTACAAGGACAAGCTGTCCGACGGGCAGGTGGCGATGTTCAAGCGCTA TCCCGAAACCTACAAGATTCCGGTCTACCCGACCCACCGCACCGTGGCCGTGCCACCGGAAATCTACGAGTCGGCCAAGC GCAGTGCGCTCAACGTCACCACGATCAACGACGGCAACGGTCTGGCCAACTTCACCGGCAATCGCTACTACGCCTTCCCG ATTCCGAAGAATGGCGTTGAGGTTCTGTGGAATCACATCACCCGCTATCACGGCGGCAATCTGCGACGGATCATCACTCA GGTGACCCCGCAGACCAACGGCAGCTACACGCCGATCCGCTTCGAAGAAGAGATCGCGGTGCCGCAACTGATGAAGGATC TCGATCCGGAAAAAGCCGCCAACGTCCTGACCTTTTTCAAACAGTCGGTGACCGCCCCGGCGCGTCTGGCCGGTAACGTG CTGCTGGTGCACGAGACCCTCGATCAGGTGAAAGAGCCGCGCCTGGCGTGGATCTACAACGCCGGCCAGCGCCGGGTACG GCGTGCGCCGCAGGTTGCCTATGACGGGCCGGGCACCGCCGCCGACGGCCTGCGCACCTCGGACAACTTCGACATGTTCT CCGGCGCGCCGGATCGCTACGACTGGAAACTGATCGGCAAGAAGGAAATGTACATTCCGTACAACAGCTACAAGCTCGAC TCGCCGAGCCTCAAGTACGACGACATCGTCAAGGCCGGGCACATCAACCAGGACCTGACCCGCTATGAACTGCACCGGGT CTGGGAAGTGGTCGGTACGGTCAAACCGAACGAGCGGCACATCTACGCCAAACGCCACATGTACATCGACGAGGACAGCT GGCAAGTGGCACTGGCCGACCACTACGACGGTCGCGGGCAACTGTGGCGAGTGGCCGAAGGACACGCTCAGTACTACTAC GATCACCAGGCGCAGGCCTACACCCTTGAGGCGCTCTACGACATCATCGCCGGCCGCTACATTGCTCTGGGGATGAAGAA CGAAGAGAAGCACAGCTTCGAGTTCGGCTTCGAAGCCAAGGCCGCCGACTACACCCCGTCGGCCCTGCGTGCCGAGGGCG TACGGTAA
Upstream 100 bases:
>100_bases CCGACTTTTTCGGCGGTGACTACAACACCCTCGAAGACCGTGACTTCGTGGCCCTGAGCTTCGGTGTGAACTTCTGATCT GCCCGAGAAGGATGAGTGCA
Downstream 100 bases:
>100_bases GGGTTTCGATACATTGGCAAGGCAAAGGGCGACCATACGGTCGCCTTTTTTATGGGCGCCAATCAGCGTACTGAATACTC GTCAACAAGCGCCGGGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MRKMILQCGVLALSLLAANVIAAVSPDEANKLGTSLTPLGAEKAGNADGSIPAWTGGIPKNAGAVDSKGFLADPFASEKP LFTITAANVDKYKDKLSDGQVAMFKRYPETYKIPVYPTHRTVAVPPEIYESAKRSALNVTTINDGNGLANFTGNRYYAFP IPKNGVEVLWNHITRYHGGNLRRIITQVTPQTNGSYTPIRFEEEIAVPQLMKDLDPEKAANVLTFFKQSVTAPARLAGNV LLVHETLDQVKEPRLAWIYNAGQRRVRRAPQVAYDGPGTAADGLRTSDNFDMFSGAPDRYDWKLIGKKEMYIPYNSYKLD SPSLKYDDIVKAGHINQDLTRYELHRVWEVVGTVKPNERHIYAKRHMYIDEDSWQVALADHYDGRGQLWRVAEGHAQYYY DHQAQAYTLEALYDIIAGRYIALGMKNEEKHSFEFGFEAKAADYTPSALRAEGVR
Sequences:
>Translated_455_residues MRKMILQCGVLALSLLAANVIAAVSPDEANKLGTSLTPLGAEKAGNADGSIPAWTGGIPKNAGAVDSKGFLADPFASEKP LFTITAANVDKYKDKLSDGQVAMFKRYPETYKIPVYPTHRTVAVPPEIYESAKRSALNVTTINDGNGLANFTGNRYYAFP IPKNGVEVLWNHITRYHGGNLRRIITQVTPQTNGSYTPIRFEEEIAVPQLMKDLDPEKAANVLTFFKQSVTAPARLAGNV LLVHETLDQVKEPRLAWIYNAGQRRVRRAPQVAYDGPGTAADGLRTSDNFDMFSGAPDRYDWKLIGKKEMYIPYNSYKLD SPSLKYDDIVKAGHINQDLTRYELHRVWEVVGTVKPNERHIYAKRHMYIDEDSWQVALADHYDGRGQLWRVAEGHAQYYY DHQAQAYTLEALYDIIAGRYIALGMKNEEKHSFEFGFEAKAADYTPSALRAEGVR >Mature_455_residues MRKMILQCGVLALSLLAANVIAAVSPDEANKLGTSLTPLGAEKAGNADGSIPAWTGGIPKNAGAVDSKGFLADPFASEKP LFTITAANVDKYKDKLSDGQVAMFKRYPETYKIPVYPTHRTVAVPPEIYESAKRSALNVTTINDGNGLANFTGNRYYAFP IPKNGVEVLWNHITRYHGGNLRRIITQVTPQTNGSYTPIRFEEEIAVPQLMKDLDPEKAANVLTFFKQSVTAPARLAGNV LLVHETLDQVKEPRLAWIYNAGQRRVRRAPQVAYDGPGTAADGLRTSDNFDMFSGAPDRYDWKLIGKKEMYIPYNSYKLD SPSLKYDDIVKAGHINQDLTRYELHRVWEVVGTVKPNERHIYAKRHMYIDEDSWQVALADHYDGRGQLWRVAEGHAQYYY DHQAQAYTLEALYDIIAGRYIALGMKNEEKHSFEFGFEAKAADYTPSALRAEGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010752 [H]
Pfam domain/function: PF07044 DUF1329 [H]
EC number: NA
Molecular weight: Translated: 50885; Mature: 50885
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKMILQCGVLALSLLAANVIAAVSPDEANKLGTSLTPLGAEKAGNADGSIPAWTGGIPK CCHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NAGAVDSKGFLADPFASEKPLFTITAANVDKYKDKLSDGQVAMFKRYPETYKIPVYPTHR CCCCCCCCCCEECCCCCCCCEEEEEECCHHHHHHHCCCCCEEEEECCCCCEEEEEECCCC TVAVPPEIYESAKRSALNVTTINDGNGLANFTGNRYYAFPIPKNGVEVLWNHITRYHGGN EEECCHHHHHHHHHCEEEEEEEECCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC LRRIITQVTPQTNGSYTPIRFEEEIAVPQLMKDLDPEKAANVLTFFKQSVTAPARLAGNV HHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCE LLVHETLDQVKEPRLAWIYNAGQRRVRRAPQVAYDGPGTAADGLRTSDNFDMFSGAPDRY EEEEHHHHHHCCCCEEEEECCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC DWKLIGKKEMYIPYNSYKLDSPSLKYDDIVKAGHINQDLTRYELHRVWEVVGTVKPNERH CEEEECCEEEEECCCCEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCE IYAKRHMYIDEDSWQVALADHYDGRGQLWRVAEGHAQYYYDHQAQAYTLEALYDIIAGRY EEEEEEEEEECCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCEEHHHHHHHHHCCCE IALGMKNEEKHSFEFGFEAKAADYTPSALRAEGVR EEEECCCCCCCCEECCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MRKMILQCGVLALSLLAANVIAAVSPDEANKLGTSLTPLGAEKAGNADGSIPAWTGGIPK CCHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NAGAVDSKGFLADPFASEKPLFTITAANVDKYKDKLSDGQVAMFKRYPETYKIPVYPTHR CCCCCCCCCCEECCCCCCCCEEEEEECCHHHHHHHCCCCCEEEEECCCCCEEEEEECCCC TVAVPPEIYESAKRSALNVTTINDGNGLANFTGNRYYAFPIPKNGVEVLWNHITRYHGGN EEECCHHHHHHHHHCEEEEEEEECCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC LRRIITQVTPQTNGSYTPIRFEEEIAVPQLMKDLDPEKAANVLTFFKQSVTAPARLAGNV HHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCE LLVHETLDQVKEPRLAWIYNAGQRRVRRAPQVAYDGPGTAADGLRTSDNFDMFSGAPDRY EEEEHHHHHHCCCCEEEEECCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC DWKLIGKKEMYIPYNSYKLDSPSLKYDDIVKAGHINQDLTRYELHRVWEVVGTVKPNERH CEEEECCEEEEECCCCEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCE IYAKRHMYIDEDSWQVALADHYDGRGQLWRVAEGHAQYYYDHQAQAYTLEALYDIIAGRY EEEEEEEEEECCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCEEHHHHHHHHHCCCE IALGMKNEEKHSFEFGFEAKAADYTPSALRAEGVR EEEECCCCCCCCEECCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]