| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457132
Identifier: 77457132
GI number: 77457132
Start: 1049859
End: 1051652
Strand: Direct
Name: 77457132
Synonym: Pfl01_0905
Alternate gene names: NA
Gene position: 1049859-1051652 (Clockwise)
Preceding gene: 77457130
Following gene: 77457133
Centisome position: 16.31
GC content: 62.88
Gene sequence:
>1794_bases ATGACAAAAACAACAATGCGCGCCATCTTCACTCCGCAGGCGCTTGCCGCTGCGGTGGCTTTGGGTTGCTGTGCCCAGGC GCACGCGGTCGCTTTCAATATCGGGGAAATCGAAGGCACGTTCGACTCGTCGCTGTCGGTCGGTGCGAGCTGGGGCATGC GCGATGCCGACAAGTCGCTGGTGGGTACGGTCAACGGCGGGACGGGCCAGTCGTCCACCGGTGATGACGGGCGTTTGAAC TTCAAGAAGGGCGAGACCTTTTCCAAGATCTTCAAAGGCATCCACGACCTCGAACTGAAGTACGGCGACACCGGTGTGTT CGTGCGCGGCAAGTACTGGTACGACTTCGAACTCAAGGACGAAGACCGCGAGTTCAAACCGATCAGCGACAAGGGCCGCA AGGAGGGCGCGAAGTCTTCGGGCGCGCAGATTCTCGATGCGTTCGTCTATCACAACTATTCCATCGCCGATCTGCCGGGC ACGGTTCGCGCCGGTAAACAGGTGGTGAGCTGGGGCGAAAGCACCTTCATCGGCAACTCGATCAACAGCATCAACCCGAT CGACGTTTCGGCGTTCCGTCGGCCGGGTGCGGAGATCAAGGAGGGGCTGATTCCGGTGAACATGTTGTTCGCCTCTCAGG GGCTCACCGATCAACTGACGGTCGAGGGCTTCTATCAACTGGAATGGGATCAGACCGTCCTCGACAACTGCGGCACCTTC TTCGGTGTCGACGTGGCGGCGGACGGTTGCAACAACGGCTACACCGTCGGCAGCCCGGCGATCGCTCCGTTGGCGCCGCT GACGGCAGCCTTCGGTCAGCCGATCCAGGTCACCCGCGAAGGTGTGATCGTGCCCCGTGGCGGCGACCGCGATGCGCGGG ATTCCGGACAATGGGGTACGGCACTGCGCTGGCTCGGCGATGACACCGAGTACGGCCTCTACTTCATGAACTACCACAGC CGCACGCCGACCGTTGGCACCAGCACCGCCGGCCTGTCGACCCTGGCGTCATTGCCGGGCATGGTCGGGATCGCCAACCG GCTGGCACCCGGCAGTGGTTCGGGACTGGCGCAAAGCGTGATGCTCGGGCGTGGTCAGTACTACCTCGAATACCCGGAAG ACATTCGCCTGTACGGCGCGAGTTTCTCCACCACGTTGCCGACCGGCACCGCCTGGACCGGCGAGATCAGCTATCGGCCC AATGCGCCGGTGCAGGTCAACACCAACGACCTGACCCTGGCGCTGCTCAATCCGATTGCCGGCGGTGCTGCGTCGCCGCT GGTCACCTCGCCAGGGGCCGACAACAAGGGCTACCGGCGCAAGGAAGTGACGCAGATCCAGAGCACGCTGACGCACTTTT TCGATCAGGTCTGGGGCGCTCAACGTTTGACCCTGGTCGGTGAAGCGGCGGTGGTCCGGGTCGGTGGGCTGGAGTCGCGC AGCAAGCTGCGTTACGGCCGCGATTCGGTCTACGGCCAGTACGGTTTCGGCGGTGACACCGACGGCTTCGTCACCTCCAC CTCCTGGGGCTATCGCGCACGGGCGATCCTCGATTACGCCAACGTGATCGGCGGGATCAACCTCAAGCCCAACCTGTCCT GGTCCCACGACGTCGCCGGTTATGGCCCCAACGGTCTGTTCAACGAAGGCGCCAAGGCCGTCAGCGTCGGGGTCGATGCC GACTACCGCAACACCTATACCGCGAGCCTGAGTTACACCGACTTTTTCGGCGGTGACTACAACACCCTCGAAGACCGTGA CTTCGTGGCCCTGAGCTTCGGTGTGAACTTCTGA
Upstream 100 bases:
>100_bases CATCCTTTCGAGCGACAGCGTGAATACCTCCTTGGTGCGCTTATCGTCCCCGTGTGGCGGCAGTAGGGTGAGGCCTTCTG TCACTCACCGGGGAAGACGC
Downstream 100 bases:
>100_bases TCTGCCCGAGAAGGATGAGTGCAATGCGCAAGATGATTCTGCAATGCGGTGTCCTGGCCCTGAGCCTGCTGGCCGCCAAC GTGATCGCGGCGGTGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MTKTTMRAIFTPQALAAAVALGCCAQAHAVAFNIGEIEGTFDSSLSVGASWGMRDADKSLVGTVNGGTGQSSTGDDGRLN FKKGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKDEDREFKPISDKGRKEGAKSSGAQILDAFVYHNYSIADLPG TVRAGKQVVSWGESTFIGNSINSINPIDVSAFRRPGAEIKEGLIPVNMLFASQGLTDQLTVEGFYQLEWDQTVLDNCGTF FGVDVAADGCNNGYTVGSPAIAPLAPLTAAFGQPIQVTREGVIVPRGGDRDARDSGQWGTALRWLGDDTEYGLYFMNYHS RTPTVGTSTAGLSTLASLPGMVGIANRLAPGSGSGLAQSVMLGRGQYYLEYPEDIRLYGASFSTTLPTGTAWTGEISYRP NAPVQVNTNDLTLALLNPIAGGAASPLVTSPGADNKGYRRKEVTQIQSTLTHFFDQVWGAQRLTLVGEAAVVRVGGLESR SKLRYGRDSVYGQYGFGGDTDGFVTSTSWGYRARAILDYANVIGGINLKPNLSWSHDVAGYGPNGLFNEGAKAVSVGVDA DYRNTYTASLSYTDFFGGDYNTLEDRDFVALSFGVNF
Sequences:
>Translated_597_residues MTKTTMRAIFTPQALAAAVALGCCAQAHAVAFNIGEIEGTFDSSLSVGASWGMRDADKSLVGTVNGGTGQSSTGDDGRLN FKKGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKDEDREFKPISDKGRKEGAKSSGAQILDAFVYHNYSIADLPG TVRAGKQVVSWGESTFIGNSINSINPIDVSAFRRPGAEIKEGLIPVNMLFASQGLTDQLTVEGFYQLEWDQTVLDNCGTF FGVDVAADGCNNGYTVGSPAIAPLAPLTAAFGQPIQVTREGVIVPRGGDRDARDSGQWGTALRWLGDDTEYGLYFMNYHS RTPTVGTSTAGLSTLASLPGMVGIANRLAPGSGSGLAQSVMLGRGQYYLEYPEDIRLYGASFSTTLPTGTAWTGEISYRP NAPVQVNTNDLTLALLNPIAGGAASPLVTSPGADNKGYRRKEVTQIQSTLTHFFDQVWGAQRLTLVGEAAVVRVGGLESR SKLRYGRDSVYGQYGFGGDTDGFVTSTSWGYRARAILDYANVIGGINLKPNLSWSHDVAGYGPNGLFNEGAKAVSVGVDA DYRNTYTASLSYTDFFGGDYNTLEDRDFVALSFGVNF >Mature_596_residues TKTTMRAIFTPQALAAAVALGCCAQAHAVAFNIGEIEGTFDSSLSVGASWGMRDADKSLVGTVNGGTGQSSTGDDGRLNF KKGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKDEDREFKPISDKGRKEGAKSSGAQILDAFVYHNYSIADLPGT VRAGKQVVSWGESTFIGNSINSINPIDVSAFRRPGAEIKEGLIPVNMLFASQGLTDQLTVEGFYQLEWDQTVLDNCGTFF GVDVAADGCNNGYTVGSPAIAPLAPLTAAFGQPIQVTREGVIVPRGGDRDARDSGQWGTALRWLGDDTEYGLYFMNYHSR TPTVGTSTAGLSTLASLPGMVGIANRLAPGSGSGLAQSVMLGRGQYYLEYPEDIRLYGASFSTTLPTGTAWTGEISYRPN APVQVNTNDLTLALLNPIAGGAASPLVTSPGADNKGYRRKEVTQIQSTLTHFFDQVWGAQRLTLVGEAAVVRVGGLESRS KLRYGRDSVYGQYGFGGDTDGFVTSTSWGYRARAILDYANVIGGINLKPNLSWSHDVAGYGPNGLFNEGAKAVSVGVDAD YRNTYTASLSYTDFFGGDYNTLEDRDFVALSFGVNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63939; Mature: 63808
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTTMRAIFTPQALAAAVALGCCAQAHAVAFNIGEIEGTFDSSLSVGASWGMRDADKSL CCCCHHHEEECHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE VGTVNGGTGQSSTGDDGRLNFKKGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKD EEEECCCCCCCCCCCCCEEEECCCCHHHHHHCCCEEEEEEECCCEEEEEEEEEEEEEECC EDREFKPISDKGRKEGAKSSGAQILDAFVYHNYSIADLPGTVRAGKQVVSWGESTFIGNS CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEEECCCCHHHHCHHHHHCCCCEEECCC INSINPIDVSAFRRPGAEIKEGLIPVNMLFASQGLTDQLTVEGFYQLEWDQTVLDNCGTF CCCCCCCCHHHHCCCCHHHHHCCCEEEEEECCCCCCCEEEECEEEEEECCHHHHHCCCCE FGVDVAADGCNNGYTVGSPAIAPLAPLTAAFGQPIQVTREGVIVPRGGDRDARDSGQWGT EEEEEEECCCCCCEECCCCCCCHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCCCCC ALRWLGDDTEYGLYFMNYHSRTPTVGTSTAGLSTLASLPGMVGIANRLAPGSGSGLAQSV EEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHH MLGRGQYYLEYPEDIRLYGASFSTTLPTGTAWTGEISYRPNAPVQVNTNDLTLALLNPIA HHCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEECCCC GGAASPLVTSPGADNKGYRRKEVTQIQSTLTHFFDQVWGAQRLTLVGEAAVVRVGGLESR CCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCH SKLRYGRDSVYGQYGFGGDTDGFVTSTSWGYRARAILDYANVIGGINLKPNLSWSHDVAG HHHHCCCHHCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YGPNGLFNEGAKAVSVGVDADYRNTYTASLSYTDFFGGDYNTLEDRDFVALSFGVNF CCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure TKTTMRAIFTPQALAAAVALGCCAQAHAVAFNIGEIEGTFDSSLSVGASWGMRDADKSL CCCHHHEEECHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE VGTVNGGTGQSSTGDDGRLNFKKGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKD EEEECCCCCCCCCCCCCEEEECCCCHHHHHHCCCEEEEEEECCCEEEEEEEEEEEEEECC EDREFKPISDKGRKEGAKSSGAQILDAFVYHNYSIADLPGTVRAGKQVVSWGESTFIGNS CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEEECCCCHHHHCHHHHHCCCCEEECCC INSINPIDVSAFRRPGAEIKEGLIPVNMLFASQGLTDQLTVEGFYQLEWDQTVLDNCGTF CCCCCCCCHHHHCCCCHHHHHCCCEEEEEECCCCCCCEEEECEEEEEECCHHHHHCCCCE FGVDVAADGCNNGYTVGSPAIAPLAPLTAAFGQPIQVTREGVIVPRGGDRDARDSGQWGT EEEEEEECCCCCCEECCCCCCCHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCCCCC ALRWLGDDTEYGLYFMNYHSRTPTVGTSTAGLSTLASLPGMVGIANRLAPGSGSGLAQSV EEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHH MLGRGQYYLEYPEDIRLYGASFSTTLPTGTAWTGEISYRPNAPVQVNTNDLTLALLNPIA HHCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEECCCC GGAASPLVTSPGADNKGYRRKEVTQIQSTLTHFFDQVWGAQRLTLVGEAAVVRVGGLESR CCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCH SKLRYGRDSVYGQYGFGGDTDGFVTSTSWGYRARAILDYANVIGGINLKPNLSWSHDVAG HHHHCCCHHCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YGPNGLFNEGAKAVSVGVDADYRNTYTASLSYTDFFGGDYNTLEDRDFVALSFGVNF CCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA