| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456967
Identifier: 77456967
GI number: 77456967
Start: 867938
End: 869920
Strand: Direct
Name: 77456967
Synonym: Pfl01_0740
Alternate gene names: NA
Gene position: 867938-869920 (Clockwise)
Preceding gene: 77456966
Following gene: 77456968
Centisome position: 13.48
GC content: 49.92
Gene sequence:
>1983_bases ATGGCAAAGTTATCCATCAATCAGATATCGATTGAGAACCTAGGTCCGTTTCGTGAGCGGCAAAACTTTGACCTAAGTGT CATGCCTGGCCGACCTGTCATTTTGCTTAAAGCATTAAATGGCAGTGGAAAAACTACGTTGCTTACAGCGCTCCAAATAG GACTGTATGGCTATAAAGCGATCAACATAGCGCGCCGTACCGAGTACGAGCAGCTAATAGCTGGATTGCAGCGGACAGAT GCTACTGGGCCAGCTCGAATCGAGATGCATCTGAGTGTTGAAGTGGGGCACTATATTCAAGAGCTGACCTTACGTCGAGA GTGGCATCCAAAGGAAAAGGGATTCGGAGAGCAGTTCCGCGTGTTTGCAGGGCACATGGAAGATTTGGCTCTTGCGGAAG ACTGGGATGAATTCATTAATGGAATTCTGCCGGTAGAGTTAGTGCATCTATTCTTTTTCGATGGTGAAAAGATTGAAGCG TTGGCTAATCCGGAGCGTTTGCCTGCGCTTCTGCGCCGGGCTACTGAGGTCTTCCTTGGCTTAGGTGGTATTGACGCCTT GGCAGGAGATCTCAAAGCGGTCGAGCGGCGTGCCAATAAGAAAGTGTTGCCCACCGATTGCGCCGGCAACCATAGCCAGA CATCTGAATATGAGTTAGAGCTCAAACAGCTTGAACAACGTATTGAAATGCTCTCACAGCGACAAGCACACGCTAGGACA AACCTCGACGAAGCACAGCGTAAGCTCGAAAGCTTTTCAATCGAAGCGCAGAGAAGCGGTTTGGATGCCTACCAACAGGC AGCACAGCTACGCGTCCGCCTAGCGCTGTGTGAGCAGGAATACGGACGAGCACGCGCTTTGTTAGTAACTGCACTTGAAG ACCCGATTTTACCTTTGACCTGGCTCGGGCCGCTTTGGGAATCCTATAAAGCATATTGGCAGAAGGATCACCAGTCGAAG CACAACGATCTGATCGTCGAAGAGTTCGCAAAGCGGGACCAGCGTATTCTTGAGCGGCTTGCGCTCGATGCGCCGCATGT TATATCGATAGCTGCTGAGCTATTCGCCGCTGACCTAAAAGGCTTGCGAGTCGACAAGTCTCATATTCCGATACTGCTTT CGGGAGGGGATCCTACTGAAATTGAGGCGCAGTTCCAGCAAGCTAAGCGGCGTCTAAGAGACGCAAAGGAAATCGTTGCC ACAGCTCAACGAACAATGGAAAAAGCTCAAGATGCGGTGCATCAGATTCCTGCACATGAGCAGCTTAGTACCGTATTCGA GGCAATGCAGCAGCACACGCGAGGTGTGTCGGCAGCAGAATTGCAGCTGCATGAGTTGAGCCGTGAGCTGGAAGAGGCGC GCAATAAACAGGCTCATTTCGAGCTTCGGTACCAAGCAGCATCGGCGCGGGCAAGGGCGGAGCTAAAAGAGAATGCGTTC CATCTTAAAGCTTTGGAGGCCGCTGACCGGGCAAAAGTTGTCTTAGGCCTGTTCCGCGAGAGGTTGCTGGCATCTAAGGC TCAGTGGTTATCTGAGATGATTACCACAGAATTTAAACAGCTATTGCGAAAGCGAAATCTTATTTCTCGAGTATTGGTAG AGGCAGAGACCTATGCCGTTTCCATCGAAGATGTTAATGGATATACATTACCCATGGAGCGCCTATCGGCAGGGGAAAGG CAAATTTTGGCTATTGCTGTGCTTAGCGCGTTGATTCGGGAGCGCAAGGGGCGGTTCCCTGTGATAGTCGATACGCCTTT AGCTCGGCTGGATCGCAGTCATCGCGAAGCATTGGTTCACAATTTTTTTGCCAAGATATCGCATCAGGTAATGGTTCTCT CTACAGACGAAGAGGTCGAGGGTACTGTACATATGGCACTTGAACAACATATGAGTCGTGAGTATTCATTGATGTTCGAT GATGAAAGTCGCCGTAGCGTCGTTAGTATAAATACTCAACAGTTCCAGTTAGATACCCTATGA
Upstream 100 bases:
>100_bases TTGCGAGAAGCAATCTTGAGGATGGTCAGGAAGAAATAAATGGCGGAGAAGAGCTAGAGCTTATCCCGCTCACAGCGGTA GAGGCAGAAGAAGACTAAGT
Downstream 100 bases:
>100_bases TTATTGATCGAATTCGCTTAACTGCCGCCGCGAAGGTACAGCTATCAACGCTGAAACGGCGCTATGGTCTAGAGCATAAT AATACTATTTGTAGATATGC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase Involved In DNA Repair; SMC Protein-Like; ATPase; SMC Protein-Like Protein; SMC Domain-Containing Protein; DNA Repair ATPase; ATPase Involved In DNA Thiolation
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MAKLSINQISIENLGPFRERQNFDLSVMPGRPVILLKALNGSGKTTLLTALQIGLYGYKAINIARRTEYEQLIAGLQRTD ATGPARIEMHLSVEVGHYIQELTLRREWHPKEKGFGEQFRVFAGHMEDLALAEDWDEFINGILPVELVHLFFFDGEKIEA LANPERLPALLRRATEVFLGLGGIDALAGDLKAVERRANKKVLPTDCAGNHSQTSEYELELKQLEQRIEMLSQRQAHART NLDEAQRKLESFSIEAQRSGLDAYQQAAQLRVRLALCEQEYGRARALLVTALEDPILPLTWLGPLWESYKAYWQKDHQSK HNDLIVEEFAKRDQRILERLALDAPHVISIAAELFAADLKGLRVDKSHIPILLSGGDPTEIEAQFQQAKRRLRDAKEIVA TAQRTMEKAQDAVHQIPAHEQLSTVFEAMQQHTRGVSAAELQLHELSRELEEARNKQAHFELRYQAASARARAELKENAF HLKALEAADRAKVVLGLFRERLLASKAQWLSEMITTEFKQLLRKRNLISRVLVEAETYAVSIEDVNGYTLPMERLSAGER QILAIAVLSALIRERKGRFPVIVDTPLARLDRSHREALVHNFFAKISHQVMVLSTDEEVEGTVHMALEQHMSREYSLMFD DESRRSVVSINTQQFQLDTL
Sequences:
>Translated_660_residues MAKLSINQISIENLGPFRERQNFDLSVMPGRPVILLKALNGSGKTTLLTALQIGLYGYKAINIARRTEYEQLIAGLQRTD ATGPARIEMHLSVEVGHYIQELTLRREWHPKEKGFGEQFRVFAGHMEDLALAEDWDEFINGILPVELVHLFFFDGEKIEA LANPERLPALLRRATEVFLGLGGIDALAGDLKAVERRANKKVLPTDCAGNHSQTSEYELELKQLEQRIEMLSQRQAHART NLDEAQRKLESFSIEAQRSGLDAYQQAAQLRVRLALCEQEYGRARALLVTALEDPILPLTWLGPLWESYKAYWQKDHQSK HNDLIVEEFAKRDQRILERLALDAPHVISIAAELFAADLKGLRVDKSHIPILLSGGDPTEIEAQFQQAKRRLRDAKEIVA TAQRTMEKAQDAVHQIPAHEQLSTVFEAMQQHTRGVSAAELQLHELSRELEEARNKQAHFELRYQAASARARAELKENAF HLKALEAADRAKVVLGLFRERLLASKAQWLSEMITTEFKQLLRKRNLISRVLVEAETYAVSIEDVNGYTLPMERLSAGER QILAIAVLSALIRERKGRFPVIVDTPLARLDRSHREALVHNFFAKISHQVMVLSTDEEVEGTVHMALEQHMSREYSLMFD DESRRSVVSINTQQFQLDTL >Mature_659_residues AKLSINQISIENLGPFRERQNFDLSVMPGRPVILLKALNGSGKTTLLTALQIGLYGYKAINIARRTEYEQLIAGLQRTDA TGPARIEMHLSVEVGHYIQELTLRREWHPKEKGFGEQFRVFAGHMEDLALAEDWDEFINGILPVELVHLFFFDGEKIEAL ANPERLPALLRRATEVFLGLGGIDALAGDLKAVERRANKKVLPTDCAGNHSQTSEYELELKQLEQRIEMLSQRQAHARTN LDEAQRKLESFSIEAQRSGLDAYQQAAQLRVRLALCEQEYGRARALLVTALEDPILPLTWLGPLWESYKAYWQKDHQSKH NDLIVEEFAKRDQRILERLALDAPHVISIAAELFAADLKGLRVDKSHIPILLSGGDPTEIEAQFQQAKRRLRDAKEIVAT AQRTMEKAQDAVHQIPAHEQLSTVFEAMQQHTRGVSAAELQLHELSRELEEARNKQAHFELRYQAASARARAELKENAFH LKALEAADRAKVVLGLFRERLLASKAQWLSEMITTEFKQLLRKRNLISRVLVEAETYAVSIEDVNGYTLPMERLSAGERQ ILAIAVLSALIRERKGRFPVIVDTPLARLDRSHREALVHNFFAKISHQVMVLSTDEEVEGTVHMALEQHMSREYSLMFDD ESRRSVVSINTQQFQLDTL
Specific function: Unknown
COG id: COG0419
COG function: function code L; ATPase involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75046; Mature: 74915
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLSINQISIENLGPFRERQNFDLSVMPGRPVILLKALNGSGKTTLLTALQIGLYGYKA CCCEEECEEECCCCCCHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH INIARRTEYEQLIAGLQRTDATGPARIEMHLSVEVGHYIQELTLRREWHPKEKGFGEQFR HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHH VFAGHMEDLALAEDWDEFINGILPVELVHLFFFDGEKIEALANPERLPALLRRATEVFLG HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHC LGGIDALAGDLKAVERRANKKVLPTDCAGNHSQTSEYELELKQLEQRIEMLSQRQAHART CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC NLDEAQRKLESFSIEAQRSGLDAYQQAAQLRVRLALCEQEYGRARALLVTALEDPILPLT CHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEHHCCCCCCHH WLGPLWESYKAYWQKDHQSKHNDLIVEEFAKRDQRILERLALDAPHVISIAAELFAADLK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GLRVDKSHIPILLSGGDPTEIEAQFQQAKRRLRDAKEIVATAQRTMEKAQDAVHQIPAHE CCEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QLSTVFEAMQQHTRGVSAAELQLHELSRELEEARNKQAHFELRYQAASARARAELKENAF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH HLKALEAADRAKVVLGLFRERLLASKAQWLSEMITTEFKQLLRKRNLISRVLVEAETYAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE SIEDVNGYTLPMERLSAGERQILAIAVLSALIRERKGRFPVIVDTPLARLDRSHREALVH EEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCHHHHHHHHH NFFAKISHQVMVLSTDEEVEGTVHMALEQHMSREYSLMFDDESRRSVVSINTQQFQLDTL HHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCEEEECCC >Mature Secondary Structure AKLSINQISIENLGPFRERQNFDLSVMPGRPVILLKALNGSGKTTLLTALQIGLYGYKA CCEEECEEECCCCCCHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH INIARRTEYEQLIAGLQRTDATGPARIEMHLSVEVGHYIQELTLRREWHPKEKGFGEQFR HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHH VFAGHMEDLALAEDWDEFINGILPVELVHLFFFDGEKIEALANPERLPALLRRATEVFLG HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHC LGGIDALAGDLKAVERRANKKVLPTDCAGNHSQTSEYELELKQLEQRIEMLSQRQAHART CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC NLDEAQRKLESFSIEAQRSGLDAYQQAAQLRVRLALCEQEYGRARALLVTALEDPILPLT CHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEHHCCCCCCHH WLGPLWESYKAYWQKDHQSKHNDLIVEEFAKRDQRILERLALDAPHVISIAAELFAADLK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GLRVDKSHIPILLSGGDPTEIEAQFQQAKRRLRDAKEIVATAQRTMEKAQDAVHQIPAHE CCEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QLSTVFEAMQQHTRGVSAAELQLHELSRELEEARNKQAHFELRYQAASARARAELKENAF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH HLKALEAADRAKVVLGLFRERLLASKAQWLSEMITTEFKQLLRKRNLISRVLVEAETYAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE SIEDVNGYTLPMERLSAGERQILAIAVLSALIRERKGRFPVIVDTPLARLDRSHREALVH EEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCHHHHHHHHH NFFAKISHQVMVLSTDEEVEGTVHMALEQHMSREYSLMFDDESRRSVVSINTQQFQLDTL HHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA