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The map label for this gene is yfcD [C]

Identifier: 77456853

GI number: 77456853

Start: 736064

End: 736621

Strand: Direct

Name: yfcD [C]

Synonym: Pfl01_0625

Alternate gene names: 77456853

Gene position: 736064-736621 (Clockwise)

Preceding gene: 77456852

Following gene: 77456854

Centisome position: 11.43

GC content: 62.01

Gene sequence:

>558_bases
ATGGACGAGAGCGCCAGAGAGGCGGCCCACCGCGCTGCCTCGGATGCTGAACAGATCGCCTGGGTCGACGAGCAGGACAA
CCTGCTCGGTTCCCTGGTGCGCGCCGATCTGCGCGAGCGCGGGCTGATCGGCCGTGGCACCTACATCATGCTGTTCAACT
CCGCCGGTGAACTCTGCGTGCATCGGCGCACGTTGAGCAAAGCCATTTATCCCGGTTACTGGGACGTGGCGGCGGGCGGC
ATGGTGCAGGCGAACGAGACCTACGCCGAGTCGGCGGCCCGTGAACTGGAGGAAGAGTTGGGAGTGAGCGGCGTCAAGCT
GACGGCTCACGACCATTTCTACTTCGAGGACACCGGCAATCGCCTCTGGTGTTCGGCGTTTTCGGCAGTGTGGGACGGGC
CGTTGATCCTGCAGCCGGAGGAAGTGCTCGAAGCGCGCTTCATTCCGGTCGAACAGGTCATGCTGGAAATCCAGCAAAAG
CCTTATTGCCCGGACTCTCTGGCCGCGTTGAGACGCTATCTGAAGGCTCAGCAAAGCGACGTCGCAAAGAACACATAA

Upstream 100 bases:

>100_bases
CGGTGTGTTGGCCAACCACTCGCTGGTCATGGCCAACTACATTTCCCGGGCCAACGCCGCCGTGATCGATTTGCGTCAAC
TGCTCAATCAGGGCTGAGTC

Downstream 100 bases:

>100_bases
ATTGGCGCCGATTGGCACTTAGCAATCGGCGTTTTTGCCGTTACACTGCGCGACCTTTTCAAGCTGTGCCGGCCCGCTTT
CAGGAGCTCATGGCACAGTA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MDESAREAAHRAASDAEQIAWVDEQDNLLGSLVRADLRERGLIGRGTYIMLFNSAGELCVHRRTLSKAIYPGYWDVAAGG
MVQANETYAESAARELEEELGVSGVKLTAHDHFYFEDTGNRLWCSAFSAVWDGPLILQPEEVLEARFIPVEQVMLEIQQK
PYCPDSLAALRRYLKAQQSDVAKNT

Sequences:

>Translated_185_residues
MDESAREAAHRAASDAEQIAWVDEQDNLLGSLVRADLRERGLIGRGTYIMLFNSAGELCVHRRTLSKAIYPGYWDVAAGG
MVQANETYAESAARELEEELGVSGVKLTAHDHFYFEDTGNRLWCSAFSAVWDGPLILQPEEVLEARFIPVEQVMLEIQQK
PYCPDSLAALRRYLKAQQSDVAKNT
>Mature_185_residues
MDESAREAAHRAASDAEQIAWVDEQDNLLGSLVRADLRERGLIGRGTYIMLFNSAGELCVHRRTLSKAIYPGYWDVAAGG
MVQANETYAESAARELEEELGVSGVKLTAHDHFYFEDTGNRLWCSAFSAVWDGPLILQPEEVLEARFIPVEQVMLEIQQK
PYCPDSLAALRRYLKAQQSDVAKNT

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788637, Length=176, Percent_Identity=38.0681818181818, Blast_Score=106, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 20678; Mature: 20678

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDESAREAAHRAASDAEQIAWVDEQDNLLGSLVRADLRERGLIGRGTYIMLFNSAGELCV
CCCHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
HRRTLSKAIYPGYWDVAAGGMVQANETYAESAARELEEELGVSGVKLTAHDHFYFEDTGN
HHHHHHHHHCCCCHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCC
RLWCSAFSAVWDGPLILQPEEVLEARFIPVEQVMLEIQQKPYCPDSLAALRRYLKAQQSD
EEHHHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VAKNT
HCCCC
>Mature Secondary Structure
MDESAREAAHRAASDAEQIAWVDEQDNLLGSLVRADLRERGLIGRGTYIMLFNSAGELCV
CCCHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
HRRTLSKAIYPGYWDVAAGGMVQANETYAESAARELEEELGVSGVKLTAHDHFYFEDTGN
HHHHHHHHHCCCCHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCC
RLWCSAFSAVWDGPLILQPEEVLEARFIPVEQVMLEIQQKPYCPDSLAALRRYLKAQQSD
EEHHHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VAKNT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]