| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cobJ [H]
Identifier: 77456835
GI number: 77456835
Start: 699328
End: 701031
Strand: Direct
Name: cobJ [H]
Synonym: Pfl01_0607
Alternate gene names: 77456835
Gene position: 699328-701031 (Clockwise)
Preceding gene: 77456834
Following gene: 77456836
Centisome position: 10.86
GC content: 65.32
Gene sequence:
>1704_bases ATGACCCATTCCACACCGGCCATCGTCATTCTCGGCCAGGGCGCGCTGGCCACGGCCCGTCGCCTTCAGCAGGTCTATCC GGCTGCAAAGATTCACGGCCTCAATGGACGCGTCGAAGGCGCCGACCTGACTTACAGCGACTTCGGCGCGACCCTGCGCG AGTTGTATCAACAGGACACGCCGATCATTGCCCTGTGCGCGGCCGGCATTGTCATTCGCACCCTGGCGCCGCTGTTGCTG GAGAAAGGTGTCGAGCCACCGGTGCTCGCCGTGGCTGAAGACGGCAGCGCCGTGGTGCCGCTGCTCGGCGGCTTGGGCGG GGTGAATGTCATGGCCCGCGAGATCGCAGCTGGGCTTGAAGTGGCAGCGGCGATTACCACCAGCGGTGAGTTGCGTTTCG GCACCTGCCTGCTCAACCCGCCCGGCGGTTATGCCCTTGGCGATCTGGAGCAGGGCAAGCGTTTTGTCTCCGATCTGCTC GCCGGCCACAGCGTGCGCATCGACGGCGCTGCGCCGTGGCTTGAGCAGGCGCAACTGCCGGAAGATCCACAGGCACAGCG CTCGATTCATGTGGGTAGCGCCGCTCGCGCGGCGAATACCAGTGAGTTACTGATTTATCCGCGCAGCGTGGCGGTGGCGG TGGGTTCGTCAGTGACTGACGTGCCGGGCACCCTTCGCGATGCATTGCAGCAGGCCGGTGTGGCGATTCAATCGCTGGCC TGTCTGGTGGCGGCCGATGCTCAGATGGCCAGTCCGGCATTGCGTGAAGCCGCACTTGAACTGGCAGTGCCGCTGCGCTT TGTCGCGCCGGCGAATGACATCGGTGAGTTGGTTCGCGATGCAGTCCCCGGCGCTCGAATCATCACAACATCCCGAGACA TTGCCATCGCCGTGGCCGAACAGCCGCTGGATGTTTCGCAGATCGGTCGTCCGCGCGGCCGTCTGGCCGTCATCGGCCTC GGCCCGGGCGCGGCAGAGCTGATGGTGCCTGCGGTGAAAGCCGAACTGGCCCGCGCCACCGACGTTCTCGGTTACGAAAC CTACGTGCGCATGGCCGGCCCCTTCCGCGACGATCAGGTGCAGCATTGCACCGACAACCGCGAAGAAATGCAGCGTGCCC GTCACGCCTTCAGACTGGCCGCTCAGGGACGTTCGGTGATTGTGGTTTCGTCGGGCGATCCGGGCGTGTTCGCCATGGCG GCAGCGGTGCTCGAAGCGTTGCACGAGTCGACGGACCCGGCGTGGCACAGCGTCGATCTGGAAATCCTGCCGGGTGTTTC GGCGTCGCTCGCCACCGCCGCTCAGGCCGGTGCACCGCTGGGCCATGACTTCTGCGTGATGTCGCTGTCGGACAACCTCA AGCCGTGGTCGATCATCGAAAAGCGTCTGGATCTGGCCGCCGAGGCGGATCTGGCGCTGGCCTTCTACAACCCGATCTCT CGTTCGCGACCGTGGCAGTTGGGCCGAGCCCTGGAAATCGTTGCGCAACACCGTACATCGCAGACACCGGTGGTGCTCGG GCGTGACATCGGCCGGCCGGGGCAGACGTTGCGGGTGACGACGCTCGGCGCGTTGACCCCGGATCAAGTGGACATGCGCA CTATGGTGTTGATCGGTTCGTCCACCACCTGCACGTTCCCCCGCGCCGAAGGCGGGAAGTGGGTCTACACGCCACGTTGG TACGGTAGCAAGCCAGCGGGCTGA
Upstream 100 bases:
>100_bases CCATGGCCAACCAGAAGATCGTGTCGCTGGATGAGGTCGAGCCGATGTCATCGCCGTACTTCTCGCTGATCATTGTTCCC GGCGAACGGTGGCAAGGCTG
Downstream 100 bases:
>100_bases GCCTCTCGCTCCGACGTATCAGGAAGCTGGAGCAGTACTAAATAAAACAGGGCGCGAACAGGAGTTCGCGACCCTGTTTT TTTTGGGGACAAGGAAAGTT
Product: precorrin-3 methyltransferase
Products: NA
Alternate protein names: Precorrin-3 methylase; Precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MTHSTPAIVILGQGALATARRLQQVYPAAKIHGLNGRVEGADLTYSDFGATLRELYQQDTPIIALCAAGIVIRTLAPLLL EKGVEPPVLAVAEDGSAVVPLLGGLGGVNVMAREIAAGLEVAAAITTSGELRFGTCLLNPPGGYALGDLEQGKRFVSDLL AGHSVRIDGAAPWLEQAQLPEDPQAQRSIHVGSAARAANTSELLIYPRSVAVAVGSSVTDVPGTLRDALQQAGVAIQSLA CLVAADAQMASPALREAALELAVPLRFVAPANDIGELVRDAVPGARIITTSRDIAIAVAEQPLDVSQIGRPRGRLAVIGL GPGAAELMVPAVKAELARATDVLGYETYVRMAGPFRDDQVQHCTDNREEMQRARHAFRLAAQGRSVIVVSSGDPGVFAMA AAVLEALHESTDPAWHSVDLEILPGVSASLATAAQAGAPLGHDFCVMSLSDNLKPWSIIEKRLDLAAEADLALAFYNPIS RSRPWQLGRALEIVAQHRTSQTPVVLGRDIGRPGQTLRVTTLGALTPDQVDMRTMVLIGSSTTCTFPRAEGGKWVYTPRW YGSKPAG
Sequences:
>Translated_567_residues MTHSTPAIVILGQGALATARRLQQVYPAAKIHGLNGRVEGADLTYSDFGATLRELYQQDTPIIALCAAGIVIRTLAPLLL EKGVEPPVLAVAEDGSAVVPLLGGLGGVNVMAREIAAGLEVAAAITTSGELRFGTCLLNPPGGYALGDLEQGKRFVSDLL AGHSVRIDGAAPWLEQAQLPEDPQAQRSIHVGSAARAANTSELLIYPRSVAVAVGSSVTDVPGTLRDALQQAGVAIQSLA CLVAADAQMASPALREAALELAVPLRFVAPANDIGELVRDAVPGARIITTSRDIAIAVAEQPLDVSQIGRPRGRLAVIGL GPGAAELMVPAVKAELARATDVLGYETYVRMAGPFRDDQVQHCTDNREEMQRARHAFRLAAQGRSVIVVSSGDPGVFAMA AAVLEALHESTDPAWHSVDLEILPGVSASLATAAQAGAPLGHDFCVMSLSDNLKPWSIIEKRLDLAAEADLALAFYNPIS RSRPWQLGRALEIVAQHRTSQTPVVLGRDIGRPGQTLRVTTLGALTPDQVDMRTMVLIGSSTTCTFPRAEGGKWVYTPRW YGSKPAG >Mature_566_residues THSTPAIVILGQGALATARRLQQVYPAAKIHGLNGRVEGADLTYSDFGATLRELYQQDTPIIALCAAGIVIRTLAPLLLE KGVEPPVLAVAEDGSAVVPLLGGLGGVNVMAREIAAGLEVAAAITTSGELRFGTCLLNPPGGYALGDLEQGKRFVSDLLA GHSVRIDGAAPWLEQAQLPEDPQAQRSIHVGSAARAANTSELLIYPRSVAVAVGSSVTDVPGTLRDALQQAGVAIQSLAC LVAADAQMASPALREAALELAVPLRFVAPANDIGELVRDAVPGARIITTSRDIAIAVAEQPLDVSQIGRPRGRLAVIGLG PGAAELMVPAVKAELARATDVLGYETYVRMAGPFRDDQVQHCTDNREEMQRARHAFRLAAQGRSVIVVSSGDPGVFAMAA AVLEALHESTDPAWHSVDLEILPGVSASLATAAQAGAPLGHDFCVMSLSDNLKPWSIIEKRLDLAAEADLALAFYNPISR SRPWQLGRALEIVAQHRTSQTPVVLGRDIGRPGQTLRVTTLGALTPDQVDMRTMVLIGSSTTCTFPRAEGGKWVYTPRWY GSKPAG
Specific function: Methyltransferase that catalyzes the methylation of C-17 in precorrin-3B to form precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.131 [H]
Molecular weight: Translated: 59606; Mature: 59475
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSTPAIVILGQGALATARRLQQVYPAAKIHGLNGRVEGADLTYSDFGATLRELYQQDT CCCCCCEEEEECCCHHHHHHHHHHHCCHHEEECCCCEECCCCCCHHHHHHHHHHHHHCCC PIIALCAAGIVIRTLAPLLLEKGVEPPVLAVAEDGSAVVPLLGGLGGVNVMAREIAAGLE CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHCCCCCHHHHHHHHHHHHH VAAAITTSGELRFGTCLLNPPGGYALGDLEQGKRFVSDLLAGHSVRIDGAAPWLEQAQLP EEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCC EDPQAQRSIHVGSAARAANTSELLIYPRSVAVAVGSSVTDVPGTLRDALQQAGVAIQSLA CCCCHHHEEECCCHHCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHCHHHHHHH CLVAADAQMASPALREAALELAVPLRFVAPANDIGELVRDAVPGARIITTSRDIAIAVAE HHHHCCHHHCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCEEEEECCCEEEEEEC QPLDVSQIGRPRGRLAVIGLGPGAAELMVPAVKAELARATDVLGYETYVRMAGPFRDDQV CCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCH QHCTDNREEMQRARHAFRLAAQGRSVIVVSSGDPGVFAMAAAVLEALHESTDPAWHSVDL HHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECE EILPGVSASLATAAQAGAPLGHDFCVMSLSDNLKPWSIIEKRLDLAAEADLALAFYNPIS EEECCCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCC RSRPWQLGRALEIVAQHRTSQTPVVLGRDIGRPGQTLRVTTLGALTPDQVDMRTMVLIGS CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEC STTCTFPRAEGGKWVYTPRWYGSKPAG CCEEECCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure THSTPAIVILGQGALATARRLQQVYPAAKIHGLNGRVEGADLTYSDFGATLRELYQQDT CCCCCEEEEECCCHHHHHHHHHHHCCHHEEECCCCEECCCCCCHHHHHHHHHHHHHCCC PIIALCAAGIVIRTLAPLLLEKGVEPPVLAVAEDGSAVVPLLGGLGGVNVMAREIAAGLE CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHCCCCCHHHHHHHHHHHHH VAAAITTSGELRFGTCLLNPPGGYALGDLEQGKRFVSDLLAGHSVRIDGAAPWLEQAQLP EEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCC EDPQAQRSIHVGSAARAANTSELLIYPRSVAVAVGSSVTDVPGTLRDALQQAGVAIQSLA CCCCHHHEEECCCHHCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHCHHHHHHH CLVAADAQMASPALREAALELAVPLRFVAPANDIGELVRDAVPGARIITTSRDIAIAVAE HHHHCCHHHCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCEEEEECCCEEEEEEC QPLDVSQIGRPRGRLAVIGLGPGAAELMVPAVKAELARATDVLGYETYVRMAGPFRDDQV CCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCH QHCTDNREEMQRARHAFRLAAQGRSVIVVSSGDPGVFAMAAAVLEALHESTDPAWHSVDL HHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECE EILPGVSASLATAAQAGAPLGHDFCVMSLSDNLKPWSIIEKRLDLAAEADLALAFYNPIS EEECCCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCC RSRPWQLGRALEIVAQHRTSQTPVVLGRDIGRPGQTLRVTTLGALTPDQVDMRTMVLIGS CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEC STTCTFPRAEGGKWVYTPRWYGSKPAG CCEEECCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2211521; 8226690 [H]