| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is pmi [H]
Identifier: 77456787
GI number: 77456787
Start: 653487
End: 654620
Strand: Reverse
Name: pmi [H]
Synonym: Pfl01_0559
Alternate gene names: 77456787
Gene position: 654620-653487 (Counterclockwise)
Preceding gene: 77456788
Following gene: 77456777
Centisome position: 10.17
GC content: 63.76
Gene sequence:
>1134_bases ATGCCCCACGCCTCCCGCTCCACCTCCCTGCCTGAACTGACCGCCCTGTTCGGTGAAGTGCAACAGCACTTTCTCGACGT GATCGTGCCCCTCTGGCAAGGGCCGGGCTGGAACGCCGACATGGCGTTGCCTTATGAGGCGCTGGACGCTGCACATCAGC CGCTGCCACCACAGCGCTACCGGGCGATGGCCTGCGCACGGCAGCTGTACTTGTTCTCAAGCCTGATCGGGGTTGTGGAT AACGCCGAAGTCCGCGCGGCTGCGTTGTTCCGTTCCCTGCAACGGCACTTCCACGATGCCGAGCACGGCGGCTGGTTCTA CAGCATCGATCCGCAGGGCAAACCGCTGGATAAGCGCAAGGATCTCTACACCCACGCCTTCATCCTGTTTGCCTGCGCGC ATTACTGGGAAAAGTCCCGCGAGCCCTTGGTCGAATCGACCCTGAATGCCGCGCTGGAAGTCATCGGCCGACGTTTCGCC ACCGGTGACGGCCTCTACGAAGCCTGCCTCGACCGCGACTGGATCACGCTGGAAACCGGCCCGCTGCAAAACCCATTGAT GCACCTGGCCGAAGCGTTCCTGGCCACTCTGGCCGTGCGCGAAGATGCACAGGTCAAGCAAGCGCTGAGCGAGTTATGCA CAGCCATGCACAAGCGTTTCGTCGATCCTCAGGCCGGTGTGCTGATGGAAAAACCGCTGGGTGCTGTGGATAACTGGTAT GAGCCGGGCCACCAGTTCGAGTGGTATTTCCTGCTGGAATCCTCGCCCCTGCTGCGCGGCTCGAAACTGCATGCCGCGCT GGACCGGGCCTTTGCGTTCACCGAGCAGTACGGCGTGGTGCAGCCGTCCGGCGCGGTGCGGGCCATGCTCGATCTGAATA TGGGCGGGCGTCCGAAGGATTCGACCCAACGCATCTGGGCCCAGGCCGAATACCTGCGCGCGCTGACGCTGCGTCCGGAC AGCGAAGCCGCCGTGCTGCGCCAGTTGCAGGCGTTGCAGCAGCGCTTCCTGCATGCCGGTGGCTGGCATGAATGCCGCGA CGAACAGGGCGAGGTCAGCCGCAAGGACATGCCGTCGACCACGCCGTATCACTTGGCGACCTGCTACCGCGGCCTCGCCG ACTATCTGAGCTGA
Upstream 100 bases:
>100_bases ATTGCACCTCTGATCGTTCCCGCGTATGGCGCGGGAACGATCGATCGCCACTCTCTGCTACCATGTCGCGCAATCGCCCC TGCCGTGACGACGTCCGCCC
Downstream 100 bases:
>100_bases CAGCCGTGGCGAGGGAGGCGACTCCCTCGCCACGCAACATCAGGCAATCCACTTCCTGTCGCCGGTGAAGCTGATGGTCA GCCAGCGCGCCGCATCCGGT
Product: N-acylglucosamine 2-epimerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPHASRSTSLPELTALFGEVQQHFLDVIVPLWQGPGWNADMALPYEALDAAHQPLPPQRYRAMACARQLYLFSSLIGVVD NAEVRAAALFRSLQRHFHDAEHGGWFYSIDPQGKPLDKRKDLYTHAFILFACAHYWEKSREPLVESTLNAALEVIGRRFA TGDGLYEACLDRDWITLETGPLQNPLMHLAEAFLATLAVREDAQVKQALSELCTAMHKRFVDPQAGVLMEKPLGAVDNWY EPGHQFEWYFLLESSPLLRGSKLHAALDRAFAFTEQYGVVQPSGAVRAMLDLNMGGRPKDSTQRIWAQAEYLRALTLRPD SEAAVLRQLQALQQRFLHAGGWHECRDEQGEVSRKDMPSTTPYHLATCYRGLADYLS
Sequences:
>Translated_377_residues MPHASRSTSLPELTALFGEVQQHFLDVIVPLWQGPGWNADMALPYEALDAAHQPLPPQRYRAMACARQLYLFSSLIGVVD NAEVRAAALFRSLQRHFHDAEHGGWFYSIDPQGKPLDKRKDLYTHAFILFACAHYWEKSREPLVESTLNAALEVIGRRFA TGDGLYEACLDRDWITLETGPLQNPLMHLAEAFLATLAVREDAQVKQALSELCTAMHKRFVDPQAGVLMEKPLGAVDNWY EPGHQFEWYFLLESSPLLRGSKLHAALDRAFAFTEQYGVVQPSGAVRAMLDLNMGGRPKDSTQRIWAQAEYLRALTLRPD SEAAVLRQLQALQQRFLHAGGWHECRDEQGEVSRKDMPSTTPYHLATCYRGLADYLS >Mature_376_residues PHASRSTSLPELTALFGEVQQHFLDVIVPLWQGPGWNADMALPYEALDAAHQPLPPQRYRAMACARQLYLFSSLIGVVDN AEVRAAALFRSLQRHFHDAEHGGWFYSIDPQGKPLDKRKDLYTHAFILFACAHYWEKSREPLVESTLNAALEVIGRRFAT GDGLYEACLDRDWITLETGPLQNPLMHLAEAFLATLAVREDAQVKQALSELCTAMHKRFVDPQAGVLMEKPLGAVDNWYE PGHQFEWYFLLESSPLLRGSKLHAALDRAFAFTEQYGVVQPSGAVRAMLDLNMGGRPKDSTQRIWAQAEYLRALTLRPDS EAAVLRQLQALQQRFLHAGGWHECRDEQGEVSRKDMPSTTPYHLATCYRGLADYLS
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 42563; Mature: 42432
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHASRSTSLPELTALFGEVQQHFLDVIVPLWQGPGWNADMALPYEALDAAHQPLPPQRY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHH RAMACARQLYLFSSLIGVVDNAEVRAAALFRSLQRHFHDAEHGGWFYSIDPQGKPLDKRK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHH DLYTHAFILFACAHYWEKSREPLVESTLNAALEVIGRRFATGDGLYEACLDRDWITLETG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECC PLQNPLMHLAEAFLATLAVREDAQVKQALSELCTAMHKRFVDPQAGVLMEKPLGAVDNWY CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHCCCCHHHHCC EPGHQFEWYFLLESSPLLRGSKLHAALDRAFAFTEQYGVVQPSGAVRAMLDLNMGGRPKD CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCCH STQRIWAQAEYLRALTLRPDSEAAVLRQLQALQQRFLHAGGWHECRDEQGEVSRKDMPST HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC TPYHLATCYRGLADYLS CHHHHHHHHHHHHHHCC >Mature Secondary Structure PHASRSTSLPELTALFGEVQQHFLDVIVPLWQGPGWNADMALPYEALDAAHQPLPPQRY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHH RAMACARQLYLFSSLIGVVDNAEVRAAALFRSLQRHFHDAEHGGWFYSIDPQGKPLDKRK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHH DLYTHAFILFACAHYWEKSREPLVESTLNAALEVIGRRFATGDGLYEACLDRDWITLETG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECC PLQNPLMHLAEAFLATLAVREDAQVKQALSELCTAMHKRFVDPQAGVLMEKPLGAVDNWY CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHCCCCHHHHCC EPGHQFEWYFLLESSPLLRGSKLHAALDRAFAFTEQYGVVQPSGAVRAMLDLNMGGRPKD CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCCH STQRIWAQAEYLRALTLRPDSEAAVLRQLQALQQRFLHAGGWHECRDEQGEVSRKDMPST HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC TPYHLATCYRGLADYLS CHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]