| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fbpB2 [H]
Identifier: 77456758
GI number: 77456758
Start: 614720
End: 616285
Strand: Reverse
Name: fbpB2 [H]
Synonym: Pfl01_0530
Alternate gene names: 77456758
Gene position: 616285-614720 (Counterclockwise)
Preceding gene: 77456759
Following gene: 77456745
Centisome position: 9.57
GC content: 62.45
Gene sequence:
>1566_bases ATGACTGCATCGTTATCCGCCCCCGCTACACGCGGGGGTTATGTGCCACGACGCAAGCGGCCGTCGATCTGGCTGGTGCT GCCAGTGTTGCTGCTGGTGGTCATGAGCCTGTTGCCGCTGGCCTACGTCGGGCTCAAAGCCTGGCAAGCAGGCTGGTCCG AGGCGCTGCACTTGCTGTGGCGCCCGTATGTGTTCAGCCTGCTGCGCAACACGCTGGCGCTGATGGTTGGCGTGACCGTG ACTTGCGGTGTGATCGGCCTGTCGCTGGCCTGGCTGTTGGAGCGCAGCAATCTGCCGGGCCGACAGCTGTGGGGCGTGAT TCTTTGCCTGCCGTTCGCGGTGCCGGCATTTGTCAGCAGCTTCACCTGGGTTTCGCTCAGCGCGCAGTTCGAAGGACTCG GCGGGGCGATTCTTGTGATGAGCCTGTCGAAATACCCGCTGATCTTTCTGCCGGTGGCCGCCACACTGCGCAATCTTGAT CCCTCCCTTGAAGAATCGGCACGGACGCTGGGTCAGAATCGCTGGGGCGTGTTTTTCCGCGTCACCCTTCCACTGCTCTG GCCTTCGCTGCTGGCCGGTTCGCTGCTGATTGCGCTGCACATGCTGGTGGAATTCGGCGCACTGTCGATCATTGGCCTGC AAACCTTTACCACCGCGATCTATCAGCAATTCGAACTGGAATTCAGCAATGCCAACGCGGCGATGCTGTCGGCGGTATTG CTGGCGCTGTGCTTGATGCTGTTGTGGCTGGAGCTGCGCGTGCGCGGCAAGGGCCGGCACGTACGCACCGGCCAGGGTGC GGCGCGTCGAGCTGAACAAGTGCGACTGGGCCCTTGGGCGATCGCCGGTCAGTTGTATTGCCTGATGCTGGCGATTGTTG GCAGCGGGATCCCACTGGGCATGCTGGCCTACTGGCTTGCCGTGGGATCGTCAGCAGCCTTCCCGGTGGCGGCAATCACC GAAGCATTGCTGTCATCGCTGGCTCTATCGCTGGGCGGCGCAGGATTGTGCCTCGTGCTGGCGGTGCCGGTCGGATTGCT GGTAGTGCGCTACAAAGGCCAACTGGCGATCTGGGCCGAGCGCCTGCCCTATCTGCTGCACGCCCTGCCGGGATTGGTGA TCGCATTGACGCTGGTGTATTTCGCCCTGCATTACGTGCCGGCGCTGTACCAGACCTCCGCGCTGTTGCTGATCGCCTAT GCGCTGCTGTTTCTGCCTCTGGCTCAGGCACCGATCCGCACGGCGCTGAACAAGGCGGCACCGCAACTTGAAGAAGCCGC CCGCACCCTCGGCGCCTCTTCGTTCACGGCGTTCTGCCGGGTGACTCTACCGATCATCTTCCCGGCACTGGGCGCAGCGT TTGCGCTGGTATTTCTGGATGCCATGAAGGAACTGACGGCGACGTTGCTGCTGAGCCCCACAGGGCTCAACACATTGGCG ACGGAAGTCTGGGCACACACCGCGAATGTCGAGTTCGCAGCGGCGGCGCCTTATGCGGCGTTGTTGATTGTGGTGTCGGG ATTGCCGGTGTATCTGCTGACGACCCGGATGTATTTGAGCCGATAA
Upstream 100 bases:
>100_bases TCAAGCCGTTCAGTGAACTGGAAGCACCGGACGTCACGCCGGCCGACCTGGGCAACGCCGAAGAAGCGCTGGAGCTGGAA CGCGAAGTTGGCCTGAACTG
Downstream 100 bases:
>100_bases AAAAATCGCAGCCGAGGCTGCGATTTTTTTTGCCCGGACTATCAGGCCCGGAACTGCCCCAGACTGGCCTTGAGCTGCGC CGCCAGACCATCCAGCACCT
Product: binding-protein dependent transport system inner membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MTASLSAPATRGGYVPRRKRPSIWLVLPVLLLVVMSLLPLAYVGLKAWQAGWSEALHLLWRPYVFSLLRNTLALMVGVTV TCGVIGLSLAWLLERSNLPGRQLWGVILCLPFAVPAFVSSFTWVSLSAQFEGLGGAILVMSLSKYPLIFLPVAATLRNLD PSLEESARTLGQNRWGVFFRVTLPLLWPSLLAGSLLIALHMLVEFGALSIIGLQTFTTAIYQQFELEFSNANAAMLSAVL LALCLMLLWLELRVRGKGRHVRTGQGAARRAEQVRLGPWAIAGQLYCLMLAIVGSGIPLGMLAYWLAVGSSAAFPVAAIT EALLSSLALSLGGAGLCLVLAVPVGLLVVRYKGQLAIWAERLPYLLHALPGLVIALTLVYFALHYVPALYQTSALLLIAY ALLFLPLAQAPIRTALNKAAPQLEEAARTLGASSFTAFCRVTLPIIFPALGAAFALVFLDAMKELTATLLLSPTGLNTLA TEVWAHTANVEFAAAAPYAALLIVVSGLPVYLLTTRMYLSR
Sequences:
>Translated_521_residues MTASLSAPATRGGYVPRRKRPSIWLVLPVLLLVVMSLLPLAYVGLKAWQAGWSEALHLLWRPYVFSLLRNTLALMVGVTV TCGVIGLSLAWLLERSNLPGRQLWGVILCLPFAVPAFVSSFTWVSLSAQFEGLGGAILVMSLSKYPLIFLPVAATLRNLD PSLEESARTLGQNRWGVFFRVTLPLLWPSLLAGSLLIALHMLVEFGALSIIGLQTFTTAIYQQFELEFSNANAAMLSAVL LALCLMLLWLELRVRGKGRHVRTGQGAARRAEQVRLGPWAIAGQLYCLMLAIVGSGIPLGMLAYWLAVGSSAAFPVAAIT EALLSSLALSLGGAGLCLVLAVPVGLLVVRYKGQLAIWAERLPYLLHALPGLVIALTLVYFALHYVPALYQTSALLLIAY ALLFLPLAQAPIRTALNKAAPQLEEAARTLGASSFTAFCRVTLPIIFPALGAAFALVFLDAMKELTATLLLSPTGLNTLA TEVWAHTANVEFAAAAPYAALLIVVSGLPVYLLTTRMYLSR >Mature_520_residues TASLSAPATRGGYVPRRKRPSIWLVLPVLLLVVMSLLPLAYVGLKAWQAGWSEALHLLWRPYVFSLLRNTLALMVGVTVT CGVIGLSLAWLLERSNLPGRQLWGVILCLPFAVPAFVSSFTWVSLSAQFEGLGGAILVMSLSKYPLIFLPVAATLRNLDP SLEESARTLGQNRWGVFFRVTLPLLWPSLLAGSLLIALHMLVEFGALSIIGLQTFTTAIYQQFELEFSNANAAMLSAVLL ALCLMLLWLELRVRGKGRHVRTGQGAARRAEQVRLGPWAIAGQLYCLMLAIVGSGIPLGMLAYWLAVGSSAAFPVAAITE ALLSSLALSLGGAGLCLVLAVPVGLLVVRYKGQLAIWAERLPYLLHALPGLVIALTLVYFALHYVPALYQTSALLLIAYA LLFLPLAQAPIRTALNKAAPQLEEAARTLGASSFTAFCRVTLPIIFPALGAAFALVFLDAMKELTATLLLSPTGLNTLAT EVWAHTANVEFAAAAPYAALLIVVSGLPVYLLTTRMYLSR
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=179, Percent_Identity=34.6368715083799, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786980, Length=212, Percent_Identity=28.7735849056604, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87082099, Length=252, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56069; Mature: 55938
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASLSAPATRGGYVPRRKRPSIWLVLPVLLLVVMSLLPLAYVGLKAWQAGWSEALHLLW CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPYVFSLLRNTLALMVGVTVTCGVIGLSLAWLLERSNLPGRQLWGVILCLPFAVPAFVSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FTWVSLSAQFEGLGGAILVMSLSKYPLIFLPVAATLRNLDPSLEESARTLGQNRWGVFFR HHHEEEEHHHCCCCCEEEEEECCCCCEEEEEHHHHHHCCCCCHHHHHHHHCCCCCCEEEE VTLPLLWPSLLAGSLLIALHMLVEFGALSIIGLQTFTTAIYQQFELEFSNANAAMLSAVL EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH LALCLMLLWLELRVRGKGRHVRTGQGAARRAEQVRLGPWAIAGQLYCLMLAIVGSGIPLG HHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH MLAYWLAVGSSAAFPVAAITEALLSSLALSLGGAGLCLVLAVPVGLLVVRYKGQLAIWAE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHH RLPYLLHALPGLVIALTLVYFALHYVPALYQTSALLLIAYALLFLPLAQAPIRTALNKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PQLEEAARTLGASSFTAFCRVTLPIIFPALGAAFALVFLDAMKELTATLLLSPTGLNTLA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TEVWAHTANVEFAAAAPYAALLIVVSGLPVYLLTTRMYLSR HHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure TASLSAPATRGGYVPRRKRPSIWLVLPVLLLVVMSLLPLAYVGLKAWQAGWSEALHLLW CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPYVFSLLRNTLALMVGVTVTCGVIGLSLAWLLERSNLPGRQLWGVILCLPFAVPAFVSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FTWVSLSAQFEGLGGAILVMSLSKYPLIFLPVAATLRNLDPSLEESARTLGQNRWGVFFR HHHEEEEHHHCCCCCEEEEEECCCCCEEEEEHHHHHHCCCCCHHHHHHHHCCCCCCEEEE VTLPLLWPSLLAGSLLIALHMLVEFGALSIIGLQTFTTAIYQQFELEFSNANAAMLSAVL EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH LALCLMLLWLELRVRGKGRHVRTGQGAARRAEQVRLGPWAIAGQLYCLMLAIVGSGIPLG HHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH MLAYWLAVGSSAAFPVAAITEALLSSLALSLGGAGLCLVLAVPVGLLVVRYKGQLAIWAE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHH RLPYLLHALPGLVIALTLVYFALHYVPALYQTSALLLIAYALLFLPLAQAPIRTALNKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PQLEEAARTLGASSFTAFCRVTLPIIFPALGAAFALVFLDAMKELTATLLLSPTGLNTLA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TEVWAHTANVEFAAAAPYAALLIVVSGLPVYLLTTRMYLSR HHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]