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The map label for this gene is 77456708

Identifier: 77456708

GI number: 77456708

Start: 555573

End: 557435

Strand: Reverse

Name: 77456708

Synonym: Pfl01_0480

Alternate gene names: NA

Gene position: 557435-555573 (Counterclockwise)

Preceding gene: 77456713

Following gene: 77456707

Centisome position: 8.66

GC content: 60.49

Gene sequence:

>1863_bases
ATGCAATTCAGCGGCTTCAGCAGTACGTCCAGTCGAATTTTCGATTTCATCAGCCTGTGGATTCTTCCCGTCGGCTACTT
CCTGCTCTTGTGCGCGCTGTTCTTCCTGCCGGGCCGCAGCCTTCATCACAAGCTGTTTTACGGCCTGTTCAGCATTCCGA
CGCTGATCGCCCTGTGCCTGCGCCCGCGTGAACTCAAGGAAATGCTGCGTGAACCGGTGTTCATCGCACTGCTGCTGTTT
GCCGGCTGGGCGTTACTCAGTCTTTGCTGGGGTCCGCAGGATGAACCGATAGGCGGCATGTTCAAACCTCCGTTGCATAC
CCTGATGCTGTTCGCCGGGTGTTTTCTGCTGGTCCGCTACCGCAGCGACATCCTGACCCCGTTGCTGTTCGCCGCCGCAC
TGGTGGCCCTGATCGCAACGATCGCCTTCCTGATTCCGTTCATGCTCCACTTCGAACCCGGCGCGCGCCTGATCGGCGGC
GGCGCGTTCGACAACCCGCTGCTCAGCTCCCATCTGTTCGGATTTTTCTGCGCCTACTGGCTCAGTCTGAGCATGACCTG
CAAGAATCGCCGGCTGTACTGGCTCAGCATCCCTGCGATGCTGATCATGTTCATGGCCGTGATCGGAACCGGTTCCCGCA
CTCCGCTGGTGGCGCTGACCATGGCCGCATTGTGGCTCAGCCTGATTTGCTGGAACCGTCGCTCACTGGTACTGCTGGGC
ACACTCGCGATCGGTGGCGCAACGGTGGTGGTGCTGTTCTCGAAAATGATCATCGAACGCGGTGACTCCTATCGTTTCGA
GATCTGGCAGCAAGCCCTGGAAAAAATCGCCGAGCATCCGTGGATCGGCCACGGTTACAACGCGGTTCTGGCGATTGACC
CAGGCGTCGGTTACAACTTCCAGGAACCGCACAGCTTTGCGCTGGGAGTGCTTTATTACGTCGGCATCCTCGGCATGCTG
CCCTGGCTGTTTTTCCAGGCCTGGGGGCTGCTGAGCAGCTGGCGTCAGCGCGTGCAGCCATTGCTGATCATCGCCTCGAC
CTGGCTGGTGTTCGGCATCGGTGCCGGGCTGACCGAAGGCGGCGGAATCATTTCCCGCCCCAAGGAACACTGGTTCCTGC
TGTGGATTCCTTTGGCGCTGATTGCGGCCCTGAGCATCAATCAACGTGCCCGACGGCTTTTGGCAATGCCGGTACAAAAG
CTGTCGGCAACCGCTCTGCAACAGCTGAGCAGCGACGCCCAGGTCATCGAGGAAGATGGATTGGGGCCCAAGGTCCTGCG
CCTGTCCGATGGCAGTTTCCTCAAACTGTTTCGCCATCGCCGCTGGTATACATCGGGCAGCTTCAACCCGTATTCCGAGC
GGTTTGCCGTCAACAGCGAACAGCTGCGCCGGATGGGCATTCCCACGCCACAGGTGCTCAACCTCTATCGCCTCGACGAC
GGCAGCAGCGCCGTGCATTACACGCCGCTGCCGGGCCACACCCTGCGCCAGGTGCTGCAGGGGATCACCGCGCCTGCAGT
GCGTCATGCGCTGGTGGAGCGTTTCGGCAAATTCATGGCCAGCCTGCATGAGCAAGGCGTGTATTTCCGCTCGCTGCATC
TGGGCAATGTGCTGGTGCTGGAAGACGGAGAGTTCGGGCTGATCGATCTGGCCGACCTGCGGATCTACCCTTCCCCCCTC
AGCCTGTCACTGCGCCAGCGTAATCTGCGCCACATGCAACGCTACACCGTCGACAGACGCTGGCTGTTCGAGGATCACCT
CGAGGCACTGCTCCAGGGATACGCCGTAACGGCGTCGAAATCCGCCGTAGACAATCTGCACAGGCAAGTGCTGGCCGGCA
ACACGCCGGCTAGGGTTCATTGA

Upstream 100 bases:

>100_bases
TCTGGCAATCGGCCAAAGGCTGTTATTGTTAGGCGTCTTTTTCAGCGTCAAATAGCCATCATCCAAATGGCCGATCAACC
TCAGGATTGAAACACACAGC

Downstream 100 bases:

>100_bases
TGATTCAGACCAGTCCGTTCATTGCGCCGGCCGCCTATCTGCTGGCCATCGTATCCGCCGCTTTACTGCTGCGGGCCGTA
CCGAAGATCGCACGCCATCT

Product: O-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MQFSGFSSTSSRIFDFISLWILPVGYFLLLCALFFLPGRSLHHKLFYGLFSIPTLIALCLRPRELKEMLREPVFIALLLF
AGWALLSLCWGPQDEPIGGMFKPPLHTLMLFAGCFLLVRYRSDILTPLLFAAALVALIATIAFLIPFMLHFEPGARLIGG
GAFDNPLLSSHLFGFFCAYWLSLSMTCKNRRLYWLSIPAMLIMFMAVIGTGSRTPLVALTMAALWLSLICWNRRSLVLLG
TLAIGGATVVVLFSKMIIERGDSYRFEIWQQALEKIAEHPWIGHGYNAVLAIDPGVGYNFQEPHSFALGVLYYVGILGML
PWLFFQAWGLLSSWRQRVQPLLIIASTWLVFGIGAGLTEGGGIISRPKEHWFLLWIPLALIAALSINQRARRLLAMPVQK
LSATALQQLSSDAQVIEEDGLGPKVLRLSDGSFLKLFRHRRWYTSGSFNPYSERFAVNSEQLRRMGIPTPQVLNLYRLDD
GSSAVHYTPLPGHTLRQVLQGITAPAVRHALVERFGKFMASLHEQGVYFRSLHLGNVLVLEDGEFGLIDLADLRIYPSPL
SLSLRQRNLRHMQRYTVDRRWLFEDHLEALLQGYAVTASKSAVDNLHRQVLAGNTPARVH

Sequences:

>Translated_620_residues
MQFSGFSSTSSRIFDFISLWILPVGYFLLLCALFFLPGRSLHHKLFYGLFSIPTLIALCLRPRELKEMLREPVFIALLLF
AGWALLSLCWGPQDEPIGGMFKPPLHTLMLFAGCFLLVRYRSDILTPLLFAAALVALIATIAFLIPFMLHFEPGARLIGG
GAFDNPLLSSHLFGFFCAYWLSLSMTCKNRRLYWLSIPAMLIMFMAVIGTGSRTPLVALTMAALWLSLICWNRRSLVLLG
TLAIGGATVVVLFSKMIIERGDSYRFEIWQQALEKIAEHPWIGHGYNAVLAIDPGVGYNFQEPHSFALGVLYYVGILGML
PWLFFQAWGLLSSWRQRVQPLLIIASTWLVFGIGAGLTEGGGIISRPKEHWFLLWIPLALIAALSINQRARRLLAMPVQK
LSATALQQLSSDAQVIEEDGLGPKVLRLSDGSFLKLFRHRRWYTSGSFNPYSERFAVNSEQLRRMGIPTPQVLNLYRLDD
GSSAVHYTPLPGHTLRQVLQGITAPAVRHALVERFGKFMASLHEQGVYFRSLHLGNVLVLEDGEFGLIDLADLRIYPSPL
SLSLRQRNLRHMQRYTVDRRWLFEDHLEALLQGYAVTASKSAVDNLHRQVLAGNTPARVH
>Mature_620_residues
MQFSGFSSTSSRIFDFISLWILPVGYFLLLCALFFLPGRSLHHKLFYGLFSIPTLIALCLRPRELKEMLREPVFIALLLF
AGWALLSLCWGPQDEPIGGMFKPPLHTLMLFAGCFLLVRYRSDILTPLLFAAALVALIATIAFLIPFMLHFEPGARLIGG
GAFDNPLLSSHLFGFFCAYWLSLSMTCKNRRLYWLSIPAMLIMFMAVIGTGSRTPLVALTMAALWLSLICWNRRSLVLLG
TLAIGGATVVVLFSKMIIERGDSYRFEIWQQALEKIAEHPWIGHGYNAVLAIDPGVGYNFQEPHSFALGVLYYVGILGML
PWLFFQAWGLLSSWRQRVQPLLIIASTWLVFGIGAGLTEGGGIISRPKEHWFLLWIPLALIAALSINQRARRLLAMPVQK
LSATALQQLSSDAQVIEEDGLGPKVLRLSDGSFLKLFRHRRWYTSGSFNPYSERFAVNSEQLRRMGIPTPQVLNLYRLDD
GSSAVHYTPLPGHTLRQVLQGITAPAVRHALVERFGKFMASLHEQGVYFRSLHLGNVLVLEDGEFGLIDLADLRIYPSPL
SLSLRQRNLRHMQRYTVDRRWLFEDHLEALLQGYAVTASKSAVDNLHRQVLAGNTPARVH

Specific function: Potential O-antigen polymerase, which may be involved in the synthesis of LPS [H]

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the O-antigen polymerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007016 [H]

Pfam domain/function: PF04932 Wzy_C [H]

EC number: NA

Molecular weight: Translated: 69767; Mature: 69767

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFSGFSSTSSRIFDFISLWILPVGYFLLLCALFFLPGRSLHHKLFYGLFSIPTLIALCL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
RPRELKEMLREPVFIALLLFAGWALLSLCWGPQDEPIGGMFKPPLHTLMLFAGCFLLVRY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RSDILTPLLFAAALVALIATIAFLIPFMLHFEPGARLIGGGAFDNPLLSSHLFGFFCAYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHH
LSLSMTCKNRRLYWLSIPAMLIMFMAVIGTGSRTPLVALTMAALWLSLICWNRRSLVLLG
HHHHHEECCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
TLAIGGATVVVLFSKMIIERGDSYRFEIWQQALEKIAEHPWIGHGYNAVLAIDPGVGYNF
EHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
QEPHSFALGVLYYVGILGMLPWLFFQAWGLLSSWRQRVQPLLIIASTWLVFGIGAGLTEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGIISRPKEHWFLLWIPLALIAALSINQRARRLLAMPVQKLSATALQQLSSDAQVIEEDG
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
LGPKVLRLSDGSFLKLFRHRRWYTSGSFNPYSERFAVNSEQLRRMGIPTPQVLNLYRLDD
CCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHCCCCCHHHEEEEEECC
GSSAVHYTPLPGHTLRQVLQGITAPAVRHALVERFGKFMASLHEQGVYFRSLHLGNVLVL
CCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE
EDGEFGLIDLADLRIYPSPLSLSLRQRNLRHMQRYTVDRRWLFEDHLEALLQGYAVTASK
ECCCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SAVDNLHRQVLAGNTPARVH
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQFSGFSSTSSRIFDFISLWILPVGYFLLLCALFFLPGRSLHHKLFYGLFSIPTLIALCL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
RPRELKEMLREPVFIALLLFAGWALLSLCWGPQDEPIGGMFKPPLHTLMLFAGCFLLVRY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RSDILTPLLFAAALVALIATIAFLIPFMLHFEPGARLIGGGAFDNPLLSSHLFGFFCAYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHH
LSLSMTCKNRRLYWLSIPAMLIMFMAVIGTGSRTPLVALTMAALWLSLICWNRRSLVLLG
HHHHHEECCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
TLAIGGATVVVLFSKMIIERGDSYRFEIWQQALEKIAEHPWIGHGYNAVLAIDPGVGYNF
EHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
QEPHSFALGVLYYVGILGMLPWLFFQAWGLLSSWRQRVQPLLIIASTWLVFGIGAGLTEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGIISRPKEHWFLLWIPLALIAALSINQRARRLLAMPVQKLSATALQQLSSDAQVIEEDG
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
LGPKVLRLSDGSFLKLFRHRRWYTSGSFNPYSERFAVNSEQLRRMGIPTPQVLNLYRLDD
CCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHCCCCCHHHEEEEEECC
GSSAVHYTPLPGHTLRQVLQGITAPAVRHALVERFGKFMASLHEQGVYFRSLHLGNVLVL
CCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE
EDGEFGLIDLADLRIYPSPLSLSLRQRNLRHMQRYTVDRRWLFEDHLEALLQGYAVTASK
ECCCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SAVDNLHRQVLAGNTPARVH
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]