| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456665
Identifier: 77456665
GI number: 77456665
Start: 496910
End: 497455
Strand: Reverse
Name: 77456665
Synonym: Pfl01_0437
Alternate gene names: NA
Gene position: 497455-496910 (Counterclockwise)
Preceding gene: 77456666
Following gene: 77456664
Centisome position: 7.73
GC content: 62.45
Gene sequence:
>546_bases ATGAGCCGACTGATCGGTCTCGGCCTGCTGCTGGCGGGCCTGCTGTATCCCTTTGCGGTGTATTTCGGCATGGAGCATTT CGCGCCATGGCAGTTCGGCCTGCTGCTGGGCGGCCTGTGGCTGGCCCGCGCGCTGACCGGCGAACGCAAGCCCGGCAGCC TGTGGATGGCCTTTGTGGCGATCGTGTTCTGCCTGCTGCTGGCGGTGTTCGACAGCCCTTTGCTGCTGCGTTGGTACCCG GTGCTGATCAGCGGCTTCATGCTGGTGCTGTTCAGCCTGAGCCTGAAATACGGCCCGCCGATGGTCGAGCGTCTGGCTCG CCTGCGTGAGCCGCAACTGCCGCCCAAGGCGATTCGTTACACCCGCCAGGTCACCGTGGCCTGGAGCGTGTTTTTCTTTT GCAACGGTTTGTGCGCCGCCCTGCTGACACTGTGGGCGCCGCTGAACTGGTGGATGTTGTACACCGGCCTGATCTCCTAC GGATTGATCGGCCTGATGTTTGCCATTGAATGGCTGATACGACAACGGGTAAGAGGTCGCCCATGA
Upstream 100 bases:
>100_bases AGCGCCAGACCGGCAAGAAAATCGCCGCCGAGGAGTTCAAGTCGGTGCGCACCGTCAGCGACGTGGTCGAGGCGGTCTAC CGTCTGGTTCAACCGGCGGC
Downstream 100 bases:
>100_bases ACTGGATAAAACTTGAGCAGCTGTTGCTCAAGGCCCTGCCGGCGCGCGCAGTAACAAGCGCACCGGCACTCGATCACGCA CAACTGCGCGAACAGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSRLIGLGLLLAGLLYPFAVYFGMEHFAPWQFGLLLGGLWLARALTGERKPGSLWMAFVAIVFCLLLAVFDSPLLLRWYP VLISGFMLVLFSLSLKYGPPMVERLARLREPQLPPKAIRYTRQVTVAWSVFFFCNGLCAALLTLWAPLNWWMLYTGLISY GLIGLMFAIEWLIRQRVRGRP
Sequences:
>Translated_181_residues MSRLIGLGLLLAGLLYPFAVYFGMEHFAPWQFGLLLGGLWLARALTGERKPGSLWMAFVAIVFCLLLAVFDSPLLLRWYP VLISGFMLVLFSLSLKYGPPMVERLARLREPQLPPKAIRYTRQVTVAWSVFFFCNGLCAALLTLWAPLNWWMLYTGLISY GLIGLMFAIEWLIRQRVRGRP >Mature_180_residues SRLIGLGLLLAGLLYPFAVYFGMEHFAPWQFGLLLGGLWLARALTGERKPGSLWMAFVAIVFCLLLAVFDSPLLLRWYPV LISGFMLVLFSLSLKYGPPMVERLARLREPQLPPKAIRYTRQVTVAWSVFFFCNGLCAALLTLWAPLNWWMLYTGLISYG LIGLMFAIEWLIRQRVRGRP
Specific function: Unknown
COG id: COG4648
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20673; Mature: 20542
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLIGLGLLLAGLLYPFAVYFGMEHFAPWQFGLLLGGLWLARALTGERKPGSLWMAFVA CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVFCLLLAVFDSPLLLRWYPVLISGFMLVLFSLSLKYGPPMVERLARLREPQLPPKAIRY HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHH TRQVTVAWSVFFFCNGLCAALLTLWAPLNWWMLYTGLISYGLIGLMFAIEWLIRQRVRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC P C >Mature Secondary Structure SRLIGLGLLLAGLLYPFAVYFGMEHFAPWQFGLLLGGLWLARALTGERKPGSLWMAFVA CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVFCLLLAVFDSPLLLRWYPVLISGFMLVLFSLSLKYGPPMVERLARLREPQLPPKAIRY HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHH TRQVTVAWSVFFFCNGLCAALLTLWAPLNWWMLYTGLISYGLIGLMFAIEWLIRQRVRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA