| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is srfAC [H]
Identifier: 77456664
GI number: 77456664
Start: 495234
End: 496913
Strand: Reverse
Name: srfAC [H]
Synonym: Pfl01_0436
Alternate gene names: 77456664
Gene position: 496913-495234 (Counterclockwise)
Preceding gene: 77456665
Following gene: 77456663
Centisome position: 7.72
GC content: 65.71
Gene sequence:
>1680_bases ATGAACTGGATAAAACTTGAGCAGCTGTTGCTCAAGGCCCTGCCGGCGCGCGCAGTAACAAGCGCACCGGCACTCGATCA CGCACAACTGCGCGAACAGGCCCTGAGCCTGGCCGCCGGTCTGCAAGCGCGCGGCGTGCAACGTCTGGCGGTGCATCTGG AAGATGCCGCCGACCTGGCCGTCGCCCTGCTCGGCGCCTGGCGTGCCGGCGTCAGCGTGTTGCTGCCTTCAGATCTGCAA GCGCAGACCCGTCAGCGCTGGTCGAACGACGTCGATCTGTGGCTGACCGATCATTCCGATGACGCTCGCCTGAGCGATCT GCAGCAACCGGCCCTGCCCGCCGCCGAACTGGATCTCGACCAGTGCCGCCTCAGCCTGTGCACCTCCGGTTCCAGCGGCG AGCCAAAGCGCATCGACAAATCCCTGCGGCAACTGGCCAACGAAGTCGAAGCCCTCGAACAGCTGTGGGGTGCGGATCTC GGTGAAGCCTGCATTCTTGGCAGCGTTGCCACCCAGCACATCTACGGCCTGCTGTTCCGCGTGCTGTGGCCGCTGTGCGC CGGGCGTCCGTTCCTGCGCAAGCAACTGGCCTTCCCGGAAGACTTGCAACGCGCCAGCCGCGAGCATCCGGCCTTCGCCT GGGTCGCCAGCCCGGCGCTGCTCAAACGCATGGGCGACAACCTCGACTGGCCAGCGCTGAGCGCCGTGCGCCGGGTGTTT TCCTCTGGAGGCGCATTGCCGACAGACGCCGCAAAAAGCCTGCATCAACGCTTGGGGCAGTGGCCGACGGAAATCCTCGG CAGCTCGGAAACCGGCGGCATCGCCTGGCGCCAAGGCGAATCGTTGTGGCAGCCGTTTGCCGGTATCGAGTTGAGCCAGG ACAGCGACGGCGCCCTGTTGATCGCTTCGCCTTACCTGCCCGCCGGGCAGGTCGAACACACCGCCGATGCGGCGCGCATT CAGGCCGATGGCCGCTTTGAACTGCTCGGGCGGCTCGACCGGATCGTCAAACTCGAAGAAAAACGCATATCCCTGCCGAT GCTTGAACAGGCGCTGGTGGCCCACGACTGGGTCGCCGAAGCGCGTCTGGGCGTGGTGCAGGAAAACCGCGCGTCGCTCG GCGCTCTGCTGGTGCTCAGCGAATCGGGCCTGTTTGCCCTGCGCGAACACGGTCGGCGCAGCCTGACCGAAACCCTGCGC CGTCATCTCGGCGACCACTGCGAAGCCCTGGCCCTGCCCCGCCGCTGGCGCCTGCTGCGGCAAATGCCGCTGACCTCGCA GGGCAAGTTGCCTCAAGCCGACGTCGAAGCCTTGCTGCTGGCACCACGACCGAAAGCGCCGGAAATCCTGGAACAGGCCG AAACCGAGGGTGAATGGAACCTGCAATTGAGCGTTCCGCCGGACCTTGCCTACTTCAGCGGCCACTTCCCCAAGGCCCCG GTGCTGCCCGGCGTGGTGCAGGTCGAATGGGCACTGAACCTGGGTCGGCAACTGCTGAACCTGCCCGGCGCGTTCGCCGG CATGGAAGTGCTGAAGTTCCAGCAACTGGTGCGCCCCGGCGATGAAATCCAGCTGCATCTGCGCTTCGATCCGGAACGCG GCAAGTTGTATTTCGCCTACCGCAACGACACCGCCACCTGCTCCAGCGGGCGGATTCTGCTGGGGGCTGGCGATGCATAA
Upstream 100 bases:
>100_bases TGAACTGGTGGATGTTGTACACCGGCCTGATCTCCTACGGATTGATCGGCCTGATGTTTGCCATTGAATGGCTGATACGA CAACGGGTAAGAGGTCGCCC
Downstream 100 bases:
>100_bases CCCTTGCGCCGTGATTCCGGTCTACAACCACGAAACCGCCATCGGCACGGTGGTCGACGCCCTGCTCGCCGAGGATCTGC CGTGCATTCTGGTGGACGAT
Product: AMP-dependent synthetase and ligase
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MNWIKLEQLLLKALPARAVTSAPALDHAQLREQALSLAAGLQARGVQRLAVHLEDAADLAVALLGAWRAGVSVLLPSDLQ AQTRQRWSNDVDLWLTDHSDDARLSDLQQPALPAAELDLDQCRLSLCTSGSSGEPKRIDKSLRQLANEVEALEQLWGADL GEACILGSVATQHIYGLLFRVLWPLCAGRPFLRKQLAFPEDLQRASREHPAFAWVASPALLKRMGDNLDWPALSAVRRVF SSGGALPTDAAKSLHQRLGQWPTEILGSSETGGIAWRQGESLWQPFAGIELSQDSDGALLIASPYLPAGQVEHTADAARI QADGRFELLGRLDRIVKLEEKRISLPMLEQALVAHDWVAEARLGVVQENRASLGALLVLSESGLFALREHGRRSLTETLR RHLGDHCEALALPRRWRLLRQMPLTSQGKLPQADVEALLLAPRPKAPEILEQAETEGEWNLQLSVPPDLAYFSGHFPKAP VLPGVVQVEWALNLGRQLLNLPGAFAGMEVLKFQQLVRPGDEIQLHLRFDPERGKLYFAYRNDTATCSSGRILLGAGDA
Sequences:
>Translated_559_residues MNWIKLEQLLLKALPARAVTSAPALDHAQLREQALSLAAGLQARGVQRLAVHLEDAADLAVALLGAWRAGVSVLLPSDLQ AQTRQRWSNDVDLWLTDHSDDARLSDLQQPALPAAELDLDQCRLSLCTSGSSGEPKRIDKSLRQLANEVEALEQLWGADL GEACILGSVATQHIYGLLFRVLWPLCAGRPFLRKQLAFPEDLQRASREHPAFAWVASPALLKRMGDNLDWPALSAVRRVF SSGGALPTDAAKSLHQRLGQWPTEILGSSETGGIAWRQGESLWQPFAGIELSQDSDGALLIASPYLPAGQVEHTADAARI QADGRFELLGRLDRIVKLEEKRISLPMLEQALVAHDWVAEARLGVVQENRASLGALLVLSESGLFALREHGRRSLTETLR RHLGDHCEALALPRRWRLLRQMPLTSQGKLPQADVEALLLAPRPKAPEILEQAETEGEWNLQLSVPPDLAYFSGHFPKAP VLPGVVQVEWALNLGRQLLNLPGAFAGMEVLKFQQLVRPGDEIQLHLRFDPERGKLYFAYRNDTATCSSGRILLGAGDA >Mature_559_residues MNWIKLEQLLLKALPARAVTSAPALDHAQLREQALSLAAGLQARGVQRLAVHLEDAADLAVALLGAWRAGVSVLLPSDLQ AQTRQRWSNDVDLWLTDHSDDARLSDLQQPALPAAELDLDQCRLSLCTSGSSGEPKRIDKSLRQLANEVEALEQLWGADL GEACILGSVATQHIYGLLFRVLWPLCAGRPFLRKQLAFPEDLQRASREHPAFAWVASPALLKRMGDNLDWPALSAVRRVF SSGGALPTDAAKSLHQRLGQWPTEILGSSETGGIAWRQGESLWQPFAGIELSQDSDGALLIASPYLPAGQVEHTADAARI QADGRFELLGRLDRIVKLEEKRISLPMLEQALVAHDWVAEARLGVVQENRASLGALLVLSESGLFALREHGRRSLTETLR RHLGDHCEALALPRRWRLLRQMPLTSQGKLPQADVEALLLAPRPKAPEILEQAETEGEWNLQLSVPPDLAYFSGHFPKAP VLPGVVQVEWALNLGRQLLNLPGAFAGMEVLKFQQLVRPGDEIQLHLRFDPERGKLYFAYRNDTATCSSGRILLGAGDA
Specific function: Probably activates a leucine [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR006162 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 61421; Mature: 61421
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWIKLEQLLLKALPARAVTSAPALDHAQLREQALSLAAGLQARGVQRLAVHLEDAADLA CCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH VALLGAWRAGVSVLLPSDLQAQTRQRWSNDVDLWLTDHSDDARLSDLQQPALPAAELDLD HHHHHHHHHCCEEECCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCHHHCCHH QCRLSLCTSGSSGEPKRIDKSLRQLANEVEALEQLWGADLGEACILGSVATQHIYGLLFR HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VLWPLCAGRPFLRKQLAFPEDLQRASREHPAFAWVASPALLKRMGDNLDWPALSAVRRVF HHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCEEEHHCHHHHHHHCCCCCCHHHHHHHHHH SSGGALPTDAAKSLHQRLGQWPTEILGSSETGGIAWRQGESLWQPFAGIELSQDSDGALL HCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCHHHHCCCCCCEECCCCCCEEE IASPYLPAGQVEHTADAARIQADGRFELLGRLDRIVKLEEKRISLPMLEQALVAHDWVAE EECCCCCCCCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ARLGVVQENRASLGALLVLSESGLFALREHGRRSLTETLRRHLGDHCEALALPRRWRLLR HHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHH QMPLTSQGKLPQADVEALLLAPRPKAPEILEQAETEGEWNLQLSVPPDLAYFSGHFPKAP HCCCCCCCCCCHHCCCEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCC VLPGVVQVEWALNLGRQLLNLPGAFAGMEVLKFQQLVRPGDEIQLHLRFDPERGKLYFAY CCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEE RNDTATCSSGRILLGAGDA CCCCCCCCCCEEEEECCCC >Mature Secondary Structure MNWIKLEQLLLKALPARAVTSAPALDHAQLREQALSLAAGLQARGVQRLAVHLEDAADLA CCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH VALLGAWRAGVSVLLPSDLQAQTRQRWSNDVDLWLTDHSDDARLSDLQQPALPAAELDLD HHHHHHHHHCCEEECCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCHHHCCHH QCRLSLCTSGSSGEPKRIDKSLRQLANEVEALEQLWGADLGEACILGSVATQHIYGLLFR HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VLWPLCAGRPFLRKQLAFPEDLQRASREHPAFAWVASPALLKRMGDNLDWPALSAVRRVF HHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCEEEHHCHHHHHHHCCCCCCHHHHHHHHHH SSGGALPTDAAKSLHQRLGQWPTEILGSSETGGIAWRQGESLWQPFAGIELSQDSDGALL HCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCHHHHCCCCCCEECCCCCCEEE IASPYLPAGQVEHTADAARIQADGRFELLGRLDRIVKLEEKRISLPMLEQALVAHDWVAE EECCCCCCCCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ARLGVVQENRASLGALLVLSESGLFALREHGRRSLTETLRRHLGDHCEALALPRRWRLLR HHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHH QMPLTSQGKLPQADVEALLLAPRPKAPEILEQAETEGEWNLQLSVPPDLAYFSGHFPKAP HCCCCCCCCCCHHCCCEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCC VLPGVVQVEWALNLGRQLLNLPGAFAGMEVLKFQQLVRPGDEIQLHLRFDPERGKLYFAY CCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEE RNDTATCSSGRILLGAGDA CCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8355609; 8969502; 9384377; 12005429 [H]