| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hutH [H]
Identifier: 77456661
GI number: 77456661
Start: 492038
End: 493582
Strand: Reverse
Name: hutH [H]
Synonym: Pfl01_0433
Alternate gene names: 77456661
Gene position: 493582-492038 (Counterclockwise)
Preceding gene: 77456662
Following gene: 77456660
Centisome position: 7.67
GC content: 65.44
Gene sequence:
>1545_bases ATGACAACGCCAACTCCTGAGCCGGTCACCTTCGGCGAACGCCCTCTGCGCATCGAAGACGTGCTGGCTCTGGCCAACCG TCAGGCGCCCGTGCAGTTGCAGAGCGACGCGCCTTATCGCGAACGCATCGCCAAGGGCGCGCGGTTCCTCGATTCGCTGC TGGACAAGGAAGGTGTGATCTACGGCGTGACCACCGGTTACGGAGACTCCTGCGTGGTTGCGGTGCCGTTGCATCACGTC GAGGCGCTGCCGCGTCATCTCTACACGTTCCACGGTTGCGGGCTGGGCAAACTGCTCGACGCCCAGGCCACCCGCGCGGT GCTGGCGGCGCGTTTGCAGTCGTTGTGCCACGGCGTATCCGGGGTGCGCATCGAGTTGCTGGAACGCCTGCATGCCTTCC TTGAACACGACATTTTGCCGCTGATTCCTGAAGAGGGTTCGGTGGGCGCCAGCGGCGACCTGACGCCGCTGTCCTACGTC GCCGCAACCCTGTCCGGCGAGCGTGAAGTGATGTTCCGTGGCGAACGCCGCCAGGCTGCGGACGTGCACCGTGAACTGGG CTGGACACCATTGGTGCTGCGTCCGAAAGAAGCGCTGGCGCTGATGAACGGCACCGCCGTGATGACCGGTCTGGCGTGCC TGGCTTACGCCCGCGCCGACTACCTGCTGCAACTGGCCACCCGCATCACTGCGTTGAACGTGGTGGCGCTGCAAGGCAAT CCGGAACACTTCGACGAGCGCCTGTTCGCCGCCAAGCCGCATCCGGGTCAGATGCAGGTGGCCGCGTGGCTGCGCAAGGA TCTGGCAATCGACGCGCCGACCGCGCCGCTGCACCGCTTGCAGGATCGCTACTCGCTGCGCTGTGCACCGCACGTGCTTG GCGTATTGGCCGACAGCCTGAACTGGCTGCGCTCGTTCATCGAAACCGAACTCAACAGCGCCAACGACAACCCGATCATC GACGCCGAAGCCGAGCGCGTGCTGCACGGCGGACACTTCTACGGCGGGCATATCGCGTTCGCCATGGACAGCCTGAAAAA CCTCGTGGCCAACGTCGCCGACCTGCTCGACCGACAACTCGCGCTGCTGGTCGACGAGCGTTACAACCACGGTTTGCCGA GCAACCTGTCCGGCGCCAGCGCCGACCGCGCGATGCTCAACCACGGCTTCAAGGCCGTGCAAATCGGCGCCAGTGCCTGG ACTGCCGAAGCGCTGAAAAACACCATGCCGGCCAGCGTGTTCTCACGCTCCACCGAGTGCCACAACCAGGACAAGGTGAG CATGGGCACCATCGCCGCCCGCGACGCCATTCGCGTGCTGGAGCTGACCGAACAGGTCGCCGCCGCCACGTTGCTCGCGG CCAATCAAGGCGTGTGGCTGCGCGGCCGCGATGAAGACGCTCGCCCACTGCCACCGTCGCTGGCCGCCATGCATGAACAA CTGGCCCAAGACTTCCCGCCAGTGATCGAAGACCGCGCCCTGGAAGGCGAACTGCGCCTGTGCCTGCAACGCATCGCCGA GCAACACTGGAGGCTGCATGCGTAG
Upstream 100 bases:
>100_bases GTCATTCATCAGTGGGCCACCCGCTACGCCGAACGCCTGAGTCACTATTGCCTCGAAGCACCGTGCCAATGGTTCAACTT TTACCCATTCTGGAAAACCG
Downstream 100 bases:
>100_bases CGCCGGAGTGCTTCACGCCGATACGGAAATCCTCGTGCCGTTCTTTGACGTCGACACCATGCACGTCGTCTGGCACGGCC ATTACGTGAAATACCTGGAA
Product: histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTTPTPEPVTFGERPLRIEDVLALANRQAPVQLQSDAPYRERIAKGARFLDSLLDKEGVIYGVTTGYGDSCVVAVPLHHV EALPRHLYTFHGCGLGKLLDAQATRAVLAARLQSLCHGVSGVRIELLERLHAFLEHDILPLIPEEGSVGASGDLTPLSYV AATLSGEREVMFRGERRQAADVHRELGWTPLVLRPKEALALMNGTAVMTGLACLAYARADYLLQLATRITALNVVALQGN PEHFDERLFAAKPHPGQMQVAAWLRKDLAIDAPTAPLHRLQDRYSLRCAPHVLGVLADSLNWLRSFIETELNSANDNPII DAEAERVLHGGHFYGGHIAFAMDSLKNLVANVADLLDRQLALLVDERYNHGLPSNLSGASADRAMLNHGFKAVQIGASAW TAEALKNTMPASVFSRSTECHNQDKVSMGTIAARDAIRVLELTEQVAAATLLAANQGVWLRGRDEDARPLPPSLAAMHEQ LAQDFPPVIEDRALEGELRLCLQRIAEQHWRLHA
Sequences:
>Translated_514_residues MTTPTPEPVTFGERPLRIEDVLALANRQAPVQLQSDAPYRERIAKGARFLDSLLDKEGVIYGVTTGYGDSCVVAVPLHHV EALPRHLYTFHGCGLGKLLDAQATRAVLAARLQSLCHGVSGVRIELLERLHAFLEHDILPLIPEEGSVGASGDLTPLSYV AATLSGEREVMFRGERRQAADVHRELGWTPLVLRPKEALALMNGTAVMTGLACLAYARADYLLQLATRITALNVVALQGN PEHFDERLFAAKPHPGQMQVAAWLRKDLAIDAPTAPLHRLQDRYSLRCAPHVLGVLADSLNWLRSFIETELNSANDNPII DAEAERVLHGGHFYGGHIAFAMDSLKNLVANVADLLDRQLALLVDERYNHGLPSNLSGASADRAMLNHGFKAVQIGASAW TAEALKNTMPASVFSRSTECHNQDKVSMGTIAARDAIRVLELTEQVAAATLLAANQGVWLRGRDEDARPLPPSLAAMHEQ LAQDFPPVIEDRALEGELRLCLQRIAEQHWRLHA >Mature_513_residues TTPTPEPVTFGERPLRIEDVLALANRQAPVQLQSDAPYRERIAKGARFLDSLLDKEGVIYGVTTGYGDSCVVAVPLHHVE ALPRHLYTFHGCGLGKLLDAQATRAVLAARLQSLCHGVSGVRIELLERLHAFLEHDILPLIPEEGSVGASGDLTPLSYVA ATLSGEREVMFRGERRQAADVHRELGWTPLVLRPKEALALMNGTAVMTGLACLAYARADYLLQLATRITALNVVALQGNP EHFDERLFAAKPHPGQMQVAAWLRKDLAIDAPTAPLHRLQDRYSLRCAPHVLGVLADSLNWLRSFIETELNSANDNPIID AEAERVLHGGHFYGGHIAFAMDSLKNLVANVADLLDRQLALLVDERYNHGLPSNLSGASADRAMLNHGFKAVQIGASAWT AEALKNTMPASVFSRSTECHNQDKVSMGTIAARDAIRVLELTEQVAAATLLAANQGVWLRGRDEDARPLPPSLAAMHEQL AQDFPPVIEDRALEGELRLCLQRIAEQHWRLHA
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=516, Percent_Identity=35.077519379845, Blast_Score=268, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17567831, Length=504, Percent_Identity=35.7142857142857, Blast_Score=244, Evalue=5e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 56260; Mature: 56129
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00488 PAL_HISTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTPEPVTFGERPLRIEDVLALANRQAPVQLQSDAPYRERIAKGARFLDSLLDKEGVI CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEE YGVTTGYGDSCVVAVPLHHVEALPRHLYTFHGCGLGKLLDAQATRAVLAARLQSLCHGVS EEEECCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC GVRIELLERLHAFLEHDILPLIPEEGSVGASGDLTPLSYVAATLSGEREVMFRGERRQAA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHH DVHRELGWTPLVLRPKEALALMNGTAVMTGLACLAYARADYLLQLATRITALNVVALQGN HHHHHCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC PEHFDERLFAAKPHPGQMQVAAWLRKDLAIDAPTAPLHRLQDRYSLRCAPHVLGVLADSL HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH NWLRSFIETELNSANDNPIIDAEAERVLHGGHFYGGHIAFAMDSLKNLVANVADLLDRQL HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH ALLVDERYNHGLPSNLSGASADRAMLNHGFKAVQIGASAWTAEALKNTMPASVFSRSTEC HHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHHHHHCCHHH HNQDKVSMGTIAARDAIRVLELTEQVAAATLLAANQGVWLRGRDEDARPLPPSLAAMHEQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHH LAQDFPPVIEDRALEGELRLCLQRIAEQHWRLHA HHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTPTPEPVTFGERPLRIEDVLALANRQAPVQLQSDAPYRERIAKGARFLDSLLDKEGVI CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEE YGVTTGYGDSCVVAVPLHHVEALPRHLYTFHGCGLGKLLDAQATRAVLAARLQSLCHGVS EEEECCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC GVRIELLERLHAFLEHDILPLIPEEGSVGASGDLTPLSYVAATLSGEREVMFRGERRQAA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHH DVHRELGWTPLVLRPKEALALMNGTAVMTGLACLAYARADYLLQLATRITALNVVALQGN HHHHHCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC PEHFDERLFAAKPHPGQMQVAAWLRKDLAIDAPTAPLHRLQDRYSLRCAPHVLGVLADSL HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH NWLRSFIETELNSANDNPIIDAEAERVLHGGHFYGGHIAFAMDSLKNLVANVADLLDRQL HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH ALLVDERYNHGLPSNLSGASADRAMLNHGFKAVQIGASAWTAEALKNTMPASVFSRSTEC HHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHHHHHCCHHH HNQDKVSMGTIAARDAIRVLELTEQVAAATLLAANQGVWLRGRDEDARPLPPSLAAMHEQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHH LAQDFPPVIEDRALEGELRLCLQRIAEQHWRLHA HHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]