| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456566
Identifier: 77456566
GI number: 77456566
Start: 381916
End: 382356
Strand: Direct
Name: 77456566
Synonym: Pfl01_0338
Alternate gene names: NA
Gene position: 381916-382356 (Clockwise)
Preceding gene: 77456564
Following gene: 77456573
Centisome position: 5.93
GC content: 62.13
Gene sequence:
>441_bases ATGCACGGCTCCGAAGGTAAAGATGACGCGCATTCTACGCCGCAAGCGGATCCGCGTTCGAAACTATTCCCGCGGGTGAT GGCATCGCTGGCGATCGTCGGTGTGATGGTCGGAATGATGATCGGTCGTTTGACCACGCCTGACCCGACCGTCTTGCAGC AGGTCGAGGTGATTGATGATGGTCTGGCGGTCTGGTTCAACAACGAGCCGAAGCTGCACGGCGAGATCGTCGATGGCAGC GTTGCGCTGTTGTTCGGGGCTGAAGGCAAGCCCCAGAAAGGCCAGCTCAAGCTCAACGGCAAGGACGTGAACTGGCGGAC GCGTTTGAGTGACGGGGGATTGTTGCTGACGCTGGTGGCGGCGCGGCCGCTGCAGGGCGACTGGGCCGGCCAGGCGGTCG ATGACCGCTGGCGGCTGGAGATCCATCTCCGGGAGCAATAA
Upstream 100 bases:
>100_bases CGGTTCGATCAAATGCAGGTGGCAGCCGCTGTTGGCGCACAGCCTGATAACGTTGCCGGTGTTCGGCGGAATTTCCGGTT GAAAAAGGATGACGTGAAAC
Downstream 100 bases:
>100_bases AAGAGGGAATCCCCGGCCTGCCTGTACCAAGGTTCCCGAAACGGGCGGGCTCATCGCATCGCGTTCTGAGCCGGTGTAAA GAAGGAACCCCTGACCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MHGSEGKDDAHSTPQADPRSKLFPRVMASLAIVGVMVGMMIGRLTTPDPTVLQQVEVIDDGLAVWFNNEPKLHGEIVDGS VALLFGAEGKPQKGQLKLNGKDVNWRTRLSDGGLLLTLVAARPLQGDWAGQAVDDRWRLEIHLREQ
Sequences:
>Translated_146_residues MHGSEGKDDAHSTPQADPRSKLFPRVMASLAIVGVMVGMMIGRLTTPDPTVLQQVEVIDDGLAVWFNNEPKLHGEIVDGS VALLFGAEGKPQKGQLKLNGKDVNWRTRLSDGGLLLTLVAARPLQGDWAGQAVDDRWRLEIHLREQ >Mature_146_residues MHGSEGKDDAHSTPQADPRSKLFPRVMASLAIVGVMVGMMIGRLTTPDPTVLQQVEVIDDGLAVWFNNEPKLHGEIVDGS VALLFGAEGKPQKGQLKLNGKDVNWRTRLSDGGLLLTLVAARPLQGDWAGQAVDDRWRLEIHLREQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15971; Mature: 15971
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGSEGKDDAHSTPQADPRSKLFPRVMASLAIVGVMVGMMIGRLTTPDPTVLQQVEVIDD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC GLAVWFNNEPKLHGEIVDGSVALLFGAEGKPQKGQLKLNGKDVNWRTRLSDGGLLLTLVA CEEEEECCCCCEEEEEECCEEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEEE ARPLQGDWAGQAVDDRWRLEIHLREQ CCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MHGSEGKDDAHSTPQADPRSKLFPRVMASLAIVGVMVGMMIGRLTTPDPTVLQQVEVIDD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC GLAVWFNNEPKLHGEIVDGSVALLFGAEGKPQKGQLKLNGKDVNWRTRLSDGGLLLTLVA CEEEEECCCCCEEEEEECCEEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEEE ARPLQGDWAGQAVDDRWRLEIHLREQ CCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA