| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gpmI [H]
Identifier: 77456561
GI number: 77456561
Start: 378505
End: 380031
Strand: Reverse
Name: gpmI [H]
Synonym: Pfl01_0333
Alternate gene names: 77456561
Gene position: 380031-378505 (Counterclockwise)
Preceding gene: 77456565
Following gene: 77456560
Centisome position: 5.9
GC content: 63.13
Gene sequence:
>1527_bases ATGACTACCACGCCTAAACCTTTGGTCCTGATGATTCTCGACGGCTTCGGTCACAGCGACAGCCCCGAGTCCAACGCCGT CTATGCGGCCAAGAAGCCTGTGCTGGATCGCCTGTGGGCCACCGTGCCGAACGGCTTGATCTCGGGCAGCGGCATGGACG TCGGTCTGCCGGACGGCCAGATGGGCAACTCCGAAGTCGGCCACATGAACCTCGGCGCCGGGCGCGTGGTGTATCAGGAC TTCACCCGTGTGACCAAAGCGATCCGCGACGGCGAGTTCTTCGAGAACCCGACCATCTGCGCCGCCGTGGACAAGGCCGT GGCTGCCGGCAAGGCCGTGCACTTCATGGGGCTGCTGTCGGATGGCGGCGTTCACAGCCACCAGGATCACCTGATCGCCA TGGCCGAACTGGCCTTCAAGCGCGGCGCCGAAAAAATCTACCTGCACGCCTTCCTCGATGGCCGTGACACCCCGCCGAAA AGCGCTGCCTCGTCGATCGAACTGCTCGACGCGACCTTCCAGGCGCTGGGCAAGGGCCGCATCGCCAGCCTCATTGGCCG CTACTACGCCATGGATCGCGACAACCGTTGGGATCGCGTGGCCCAGGCCTACAACCTGATCGTTGATGGCAAGGGCGAAA TCAACGCCGCCACCGCCCAGGAAGGTCTGGAAGCCGCTTATGCCCGTGGCGAGAGCGACGAATTCGTCAAAGCCACCAGC ATCGGCGAGCCGGTAAAAGTCGAAGACGGCGACGCCGTGGTGTTCATGAACTTCCGCGCCGACCGTGCCCGCGAGCTGAG CCGCGTGTTTGTCGAAGACGGCTTCAAGGAATTCGAGCGCGCACGCCAGCCAAAAGTGCAGTACGTGGGCCTGACCCAGT ACGCCGAAAGCATCCCGGCCCCCGCCGCCTTCGCGCCGGGCAGCCTGGAAAACGTGCTCGGCGACTACCTGGCTAAAAAC GGCAAGACCCAGCTGCGCATCGCCGAAACCGAGAAATACGCCCACGTGACCTTCTTCTTCTCCGGTGGCCGCGAAGAACC GTTCCCGGGCGAAGAGCGCATCCTGATCCCGTCGCCGAAAGTCGCCACCTATGACTTGCAGCCGGAAATGAGCGCGCCGG AAGTCACCGACCGCATCGTCGAGGCCATCGAGAACCAGCGTTACGACGTGATCGTGGTCAACTACGCCAACGGCGACATG GTCGGCCATAGCGGCGTGTTCGAAGCCGCGGTGAAAGCCGTGGAATGCCTGGACACCTGCGTAGGCCGCATCGTCGAGGC TCTGGAAAAAGTCGGCGGTGAAGCGCTGATCACCGCCGACCACGGTAACGTCGAGCAGATGGCTGACGAATCCACCGGGC AAGCGCACACCGCACACACCACCGAGCCGGTACCGTTCATTTATGTCGGCAAGCGCGATCTGAAAGTCCGCGAAGGCGGC GTGCTGGCGGACGTGGCGCCGACCATGCTGAAACTGCTGGGTCTGGAAAAACCGGCGGAAATGACTGGCACTTCGATTCT GGTCTGA
Upstream 100 bases:
>100_bases GTCGGCCAAACCCCGTCCGGCGGTGACGCCGCCGGAACTTCGCTTTAAACTCCAACTCCCTTTTCCATCGCCCTCTTCTT ATTAGCCACGAGTGGATTCC
Downstream 100 bases:
>100_bases TATCAAAAACGCCCTGTAATCAGCCTGAAACGGCTTTTTATGACGAACGCCTCAAAGCAGTTGGCTTTGAGGCGTTTTTT TTGCTGCGTCGGGCGGGCAT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MTTTPKPLVLMILDGFGHSDSPESNAVYAAKKPVLDRLWATVPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQD FTRVTKAIRDGEFFENPTICAAVDKAVAAGKAVHFMGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPK SAASSIELLDATFQALGKGRIASLIGRYYAMDRDNRWDRVAQAYNLIVDGKGEINAATAQEGLEAAYARGESDEFVKATS IGEPVKVEDGDAVVFMNFRADRARELSRVFVEDGFKEFERARQPKVQYVGLTQYAESIPAPAAFAPGSLENVLGDYLAKN GKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDRIVEAIENQRYDVIVVNYANGDM VGHSGVFEAAVKAVECLDTCVGRIVEALEKVGGEALITADHGNVEQMADESTGQAHTAHTTEPVPFIYVGKRDLKVREGG VLADVAPTMLKLLGLEKPAEMTGTSILV
Sequences:
>Translated_508_residues MTTTPKPLVLMILDGFGHSDSPESNAVYAAKKPVLDRLWATVPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQD FTRVTKAIRDGEFFENPTICAAVDKAVAAGKAVHFMGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPK SAASSIELLDATFQALGKGRIASLIGRYYAMDRDNRWDRVAQAYNLIVDGKGEINAATAQEGLEAAYARGESDEFVKATS IGEPVKVEDGDAVVFMNFRADRARELSRVFVEDGFKEFERARQPKVQYVGLTQYAESIPAPAAFAPGSLENVLGDYLAKN GKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDRIVEAIENQRYDVIVVNYANGDM VGHSGVFEAAVKAVECLDTCVGRIVEALEKVGGEALITADHGNVEQMADESTGQAHTAHTTEPVPFIYVGKRDLKVREGG VLADVAPTMLKLLGLEKPAEMTGTSILV >Mature_507_residues TTTPKPLVLMILDGFGHSDSPESNAVYAAKKPVLDRLWATVPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDF TRVTKAIRDGEFFENPTICAAVDKAVAAGKAVHFMGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKS AASSIELLDATFQALGKGRIASLIGRYYAMDRDNRWDRVAQAYNLIVDGKGEINAATAQEGLEAAYARGESDEFVKATSI GEPVKVEDGDAVVFMNFRADRARELSRVFVEDGFKEFERARQPKVQYVGLTQYAESIPAPAAFAPGSLENVLGDYLAKNG KTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDRIVEAIENQRYDVIVVNYANGDMV GHSGVFEAAVKAVECLDTCVGRIVEALEKVGGEALITADHGNVEQMADESTGQAHTAHTTEPVPFIYVGKRDLKVREGGV LADVAPTMLKLLGLEKPAEMTGTSILV
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=512, Percent_Identity=63.28125, Blast_Score=677, Evalue=0.0, Organism=Caenorhabditis elegans, GI32564249, Length=522, Percent_Identity=45.2107279693487, Blast_Score=446, Evalue=1e-125, Organism=Caenorhabditis elegans, GI17507741, Length=522, Percent_Identity=45.2107279693487, Blast_Score=446, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 54897; Mature: 54766
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPKPLVLMILDGFGHSDSPESNAVYAAKKPVLDRLWATVPNGLISGSGMDVGLPDGQ CCCCCCCEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC MGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVAAGKAVHFMGLLS CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC DGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKSAASSIELLDATFQALGKGR CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCH IASLIGRYYAMDRDNRWDRVAQAYNLIVDGKGEINAATAQEGLEAAYARGESDEFVKATS HHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECC IGEPVKVEDGDAVVFMNFRADRARELSRVFVEDGFKEFERARQPKVQYVGLTQYAESIPA CCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCC PAAFAPGSLENVLGDYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPK CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCCC VATYDLQPEMSAPEVTDRIVEAIENQRYDVIVVNYANGDMVGHSGVFEAAVKAVECLDTC EEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH VGRIVEALEKVGGEALITADHGNVEQMADESTGQAHTAHTTEPVPFIYVGKRDLKVREGG HHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEECCC VLADVAPTMLKLLGLEKPAEMTGTSILV EEHHHHHHHHHHHCCCCCHHHCCCEECC >Mature Secondary Structure TTTPKPLVLMILDGFGHSDSPESNAVYAAKKPVLDRLWATVPNGLISGSGMDVGLPDGQ CCCCCCEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC MGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVAAGKAVHFMGLLS CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC DGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKSAASSIELLDATFQALGKGR CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCH IASLIGRYYAMDRDNRWDRVAQAYNLIVDGKGEINAATAQEGLEAAYARGESDEFVKATS HHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECC IGEPVKVEDGDAVVFMNFRADRARELSRVFVEDGFKEFERARQPKVQYVGLTQYAESIPA CCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCC PAAFAPGSLENVLGDYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPK CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCCC VATYDLQPEMSAPEVTDRIVEAIENQRYDVIVVNYANGDMVGHSGVFEAAVKAVECLDTC EEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH VGRIVEALEKVGGEALITADHGNVEQMADESTGQAHTAHTTEPVPFIYVGKRDLKVREGG HHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEECCC VLADVAPTMLKLLGLEKPAEMTGTSILV EEHHHHHHHHHHHCCCCCHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA