| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456557
Identifier: 77456557
GI number: 77456557
Start: 373427
End: 374815
Strand: Reverse
Name: 77456557
Synonym: Pfl01_0329
Alternate gene names: NA
Gene position: 374815-373427 (Counterclockwise)
Preceding gene: 77456558
Following gene: 77456549
Centisome position: 5.82
GC content: 59.32
Gene sequence:
>1389_bases ATGACAGGCATCGACAGCAACACATTATCTGCGCAGCGAATGGAACCGATCCGGTTCGGCAATCTGCTGATCAATTTCAC CAGCGAATTCCACCGGATCTGGGACAGCCGCGGCTCCGGTTCCGCGGTTGGCAGTTTTTGGCGCCCGGCTCCCGCCCCCG ATCTGCTACCGGGGTATTTCCCGTTGGGGGATGTGGCCGTGACCGGATACGAAAACGTCAATGGAAACAGAATCGTGGCC GTCGTCCGTGAAGGCGAGCCGCAAGGCGATGCCCCCTCCCGGAGCAACGCACTCAGCCCGCCCACGGACTACAAAAGAGT CTGGAAGGACGCCAACTCCGGAGCCGCCGCCGACTGCACGGTATGGCGCCCGATCCCTCCTCCCGGTTATGTGGCCATGG GGCTTGTCTGCTCCAACGGTCGCGACAAGCCATTACTCAATGCGATCCGCTGTGTCCGGGAAGATCTGGTCATGCCCGCA ACCGTTGGCGATTTGATCTGGGATGACAAAGGCAGTGGCGCCAGGCAGAACTTCAGCGCCTGGGACATTGAACCTGCGCA GGCTGCTGCGGGTGAAATCCACTTTGCAGCGGGCACGTTCTTCGGAGTCCAGAGCCACTCCAAACCTGTGAATGCCATCG TCCATGCGTTGCGAATGCAGCTTCCCCGACAGTCAATACCTGCACCCGAGGCGCCTGAACTGTCGGGGTATGGGGCCCCT CCGGAACTGGCACCGGCCAAGGTCACACAGACCGTGCGAATTCCATGGTTCGCGGTAAACGATCAACTGTCTGCGGGCGA GCAGTTGTCCACTTCCCCGTTCTACCGTCTGGAACGCTCGGATCAATATGTCCTGGTGGGGCACGGCCACAACACCAGTG ATCTGCCGCGGCCTTTCAAATGGAAAGCGGTTCGCGTCCAGAACTCGCAGATGCAGCAGATTTTCAGCCGCCTCACCGCT ATCGAGTTCTCGACAGCGTGGTCAGCGCTGCCTTCGAGCGCCCCACCTGCCATCCGCTTCTCGGCACATCTGTACAAAGA CTTTACCTACTGCGAGACATCAGCCAGCGGCTGGGATGAATCGCGCCCACTGGACATCGTCGCCATGGCTGCCAAACACA AGGCCGTGGCGGTCTATCAAATACAAAGTATCTATACGTTGAGGCGCGCAGACGGCACTCATGTAGCAGTGAGCGTGGGT TACACCGATGATGAAAGCCTTTACCTGACCGAGTATCCGCCAGACAGCGACAGCACGCTGACCTTCACTCCGCAACTGGC GACAGAGCCGCCATCAAGCGAAGGCCATTCAGACAGTGACCGCGACAATATCGGTTTCGCCCCTCAGCCGACGACAGAGG AAGAAGTCGCTACAAATACCGTCCCATGA
Upstream 100 bases:
>100_bases TACACATAGTTATTGCCTGACGACTCGCCCGCGTCTGGATAGTCACCCCTGTAATGGTTAGCGACTCTTGTGGGTCGCCT TGCAAACTTCAGGACTGACT
Downstream 100 bases:
>100_bases TCTCATCGACCACACCGTCCTTGCGCATCTGATCCAGCTCGGCCTGCAACCGGGCAACCGTTGCATCGGGCACGTCTTTG TTCAGTGCCAGATACAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTGIDSNTLSAQRMEPIRFGNLLINFTSEFHRIWDSRGSGSAVGSFWRPAPAPDLLPGYFPLGDVAVTGYENVNGNRIVA VVREGEPQGDAPSRSNALSPPTDYKRVWKDANSGAAADCTVWRPIPPPGYVAMGLVCSNGRDKPLLNAIRCVREDLVMPA TVGDLIWDDKGSGARQNFSAWDIEPAQAAAGEIHFAAGTFFGVQSHSKPVNAIVHALRMQLPRQSIPAPEAPELSGYGAP PELAPAKVTQTVRIPWFAVNDQLSAGEQLSTSPFYRLERSDQYVLVGHGHNTSDLPRPFKWKAVRVQNSQMQQIFSRLTA IEFSTAWSALPSSAPPAIRFSAHLYKDFTYCETSASGWDESRPLDIVAMAAKHKAVAVYQIQSIYTLRRADGTHVAVSVG YTDDESLYLTEYPPDSDSTLTFTPQLATEPPSSEGHSDSDRDNIGFAPQPTTEEEVATNTVP
Sequences:
>Translated_462_residues MTGIDSNTLSAQRMEPIRFGNLLINFTSEFHRIWDSRGSGSAVGSFWRPAPAPDLLPGYFPLGDVAVTGYENVNGNRIVA VVREGEPQGDAPSRSNALSPPTDYKRVWKDANSGAAADCTVWRPIPPPGYVAMGLVCSNGRDKPLLNAIRCVREDLVMPA TVGDLIWDDKGSGARQNFSAWDIEPAQAAAGEIHFAAGTFFGVQSHSKPVNAIVHALRMQLPRQSIPAPEAPELSGYGAP PELAPAKVTQTVRIPWFAVNDQLSAGEQLSTSPFYRLERSDQYVLVGHGHNTSDLPRPFKWKAVRVQNSQMQQIFSRLTA IEFSTAWSALPSSAPPAIRFSAHLYKDFTYCETSASGWDESRPLDIVAMAAKHKAVAVYQIQSIYTLRRADGTHVAVSVG YTDDESLYLTEYPPDSDSTLTFTPQLATEPPSSEGHSDSDRDNIGFAPQPTTEEEVATNTVP >Mature_461_residues TGIDSNTLSAQRMEPIRFGNLLINFTSEFHRIWDSRGSGSAVGSFWRPAPAPDLLPGYFPLGDVAVTGYENVNGNRIVAV VREGEPQGDAPSRSNALSPPTDYKRVWKDANSGAAADCTVWRPIPPPGYVAMGLVCSNGRDKPLLNAIRCVREDLVMPAT VGDLIWDDKGSGARQNFSAWDIEPAQAAAGEIHFAAGTFFGVQSHSKPVNAIVHALRMQLPRQSIPAPEAPELSGYGAPP ELAPAKVTQTVRIPWFAVNDQLSAGEQLSTSPFYRLERSDQYVLVGHGHNTSDLPRPFKWKAVRVQNSQMQQIFSRLTAI EFSTAWSALPSSAPPAIRFSAHLYKDFTYCETSASGWDESRPLDIVAMAAKHKAVAVYQIQSIYTLRRADGTHVAVSVGY TDDESLYLTEYPPDSDSTLTFTPQLATEPPSSEGHSDSDRDNIGFAPQPTTEEEVATNTVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50332; Mature: 50201
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIDSNTLSAQRMEPIRFGNLLINFTSEFHRIWDSRGSGSAVGSFWRPAPAPDLLPGYF CCCCCCCCCCHHHCCCEEECCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PLGDVAVTGYENVNGNRIVAVVREGEPQGDAPSRSNALSPPTDYKRVWKDANSGAAADCT CCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEE VWRPIPPPGYVAMGLVCSNGRDKPLLNAIRCVREDLVMPATVGDLIWDDKGSGARQNFSA EECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCC WDIEPAQAAAGEIHFAAGTFFGVQSHSKPVNAIVHALRMQLPRQSIPAPEAPELSGYGAP CCCCHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCC PELAPAKVTQTVRIPWFAVNDQLSAGEQLSTSPFYRLERSDQYVLVGHGHNTSDLPRPFK CCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCE WKAVRVQNSQMQQIFSRLTAIEFSTAWSALPSSAPPAIRFSAHLYKDFTYCETSASGWDE EEEEEECCHHHHHHHHHHHHEEHHHHHHHCCCCCCCCEEEEHHHHHCEEEEECCCCCCCC SRPLDIVAMAAKHKAVAVYQIQSIYTLRRADGTHVAVSVGYTDDESLYLTEYPPDSDSTL CCCEEEEEEECCCCEEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCEE TFTPQLATEPPSSEGHSDSDRDNIGFAPQPTTEEEVATNTVP EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure TGIDSNTLSAQRMEPIRFGNLLINFTSEFHRIWDSRGSGSAVGSFWRPAPAPDLLPGYF CCCCCCCCCHHHCCCEEECCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PLGDVAVTGYENVNGNRIVAVVREGEPQGDAPSRSNALSPPTDYKRVWKDANSGAAADCT CCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEE VWRPIPPPGYVAMGLVCSNGRDKPLLNAIRCVREDLVMPATVGDLIWDDKGSGARQNFSA EECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCC WDIEPAQAAAGEIHFAAGTFFGVQSHSKPVNAIVHALRMQLPRQSIPAPEAPELSGYGAP CCCCHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCC PELAPAKVTQTVRIPWFAVNDQLSAGEQLSTSPFYRLERSDQYVLVGHGHNTSDLPRPFK CCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCE WKAVRVQNSQMQQIFSRLTAIEFSTAWSALPSSAPPAIRFSAHLYKDFTYCETSASGWDE EEEEEECCHHHHHHHHHHHHEEHHHHHHHCCCCCCCCEEEEHHHHHCEEEEECCCCCCCC SRPLDIVAMAAKHKAVAVYQIQSIYTLRRADGTHVAVSVGYTDDESLYLTEYPPDSDSTL CCCEEEEEEECCCCEEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCEE TFTPQLATEPPSSEGHSDSDRDNIGFAPQPTTEEEVATNTVP EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA