| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456556
Identifier: 77456556
GI number: 77456556
Start: 372691
End: 373446
Strand: Direct
Name: 77456556
Synonym: Pfl01_0328
Alternate gene names: NA
Gene position: 372691-373446 (Clockwise)
Preceding gene: 77456555
Following gene: 77456562
Centisome position: 5.79
GC content: 59.26
Gene sequence:
>756_bases ATGATCAAACGCCTGCTTCTCGCCCTCGCCAGTGCCTCCGTGTTGTTGATCAACACCGGCCACGCCGAGGAAAGTCCCGA CACCGATCTGGTGCTCCTCACCGAAAACTTCCCGCCGTACAACATGGCGAAGAACGGCAAGAATTTCGCCCAGGATGAAA ACATCAACGGCATCGCCACGGACATCGTGCGCGAGATGTTCAAGCGTGCCGGCATCACTTACAGCCTGACCCTGCGCTTC CCCTGGGAGCGGGTCTACAAGCTGGCGCTGGAAAATCCCGGTTACGGTGCGTTCGTCATGGCGCGGCTGCCGGATCGCGA AAAGCTCTTCAAATGGGTCGGCCCGATCGGCCCGGACGACTGGGTCATGTTGGCCAAGGCCGACAGCAAGATCACCCTCG AAACCCTCAATGATGCGCGCAAGTACAAGATCGGCGCCTACAAGGGTGATGCGATTGCCGAGACTTTGACCAAACAGGGG CTGAAGCCGGTGGTGGTGCTGCGTGATCAGGACAACGCCAGGAAACTCGTCAGCGGTCAGATCGATCTGTGGGCCACCGG CGATCCTGCCGGCCGTTATCTGGCACGGCAGGATGGCGTGACCGGGTTGAAAACCGTACTGCGCTTCAACAGTGCCGAAC TGTATCTGGCACTGAACAAAGACGTGCCCGATGCAACGGTTGCCCGGTTGCAGGCCGAGCTGGATCAGATGCGCAAGGAC GGTGTGGTCGATGAGATCATGGGACGGTATTTGTAG
Upstream 100 bases:
>100_bases AAACGCGGCATCGTAATGCGTTAAACATCCATACAGGCCAGTGGACAGCATGGCGTACCCAAGGCACTCTTGGGCACGCC ATGGATTTCGGTAGCCCGAC
Downstream 100 bases:
>100_bases CGACTTCTTCCTCTGTCGTCGGCTGAGGGGCGAAACCGATATTGTCGCGGTCACTGTCTGAATGGCCTTCGCTTGATGGC GGCTCTGTCGCCAGTTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter; Amino Acid ABC Transporter; ABC Amino Acid Transporter Periplasmic Protein; Cache Sensor Protein
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIATDIVREMFKRAGITYSLTLRF PWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDDWVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQG LKPVVVLRDQDNARKLVSGQIDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD GVVDEIMGRYL
Sequences:
>Translated_251_residues MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIATDIVREMFKRAGITYSLTLRF PWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDDWVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQG LKPVVVLRDQDNARKLVSGQIDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD GVVDEIMGRYL >Mature_251_residues MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIATDIVREMFKRAGITYSLTLRF PWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDDWVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQG LKPVVVLRDQDNARKLVSGQIDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD GVVDEIMGRYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28003; Mature: 28003
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIAT CHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH DIVREMFKRAGITYSLTLRFPWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDD HHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCC WVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQGLKPVVVLRDQDNARKLVSGQ EEEEEECCCEEEEEECCCCHHEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHCCC IDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD EEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC GVVDEIMGRYL CCHHHHHHHCC >Mature Secondary Structure MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIAT CHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH DIVREMFKRAGITYSLTLRFPWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDD HHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCC WVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQGLKPVVVLRDQDNARKLVSGQ EEEEEECCCEEEEEECCCCHHEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHCCC IDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD EEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC GVVDEIMGRYL CCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA