| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456542
Identifier: 77456542
GI number: 77456542
Start: 360567
End: 361019
Strand: Reverse
Name: 77456542
Synonym: Pfl01_0314
Alternate gene names: NA
Gene position: 361019-360567 (Counterclockwise)
Preceding gene: 77456543
Following gene: 77456540
Centisome position: 5.61
GC content: 59.38
Gene sequence:
>453_bases ATGGCATCCCTGAACAAGCAACAGAAACGCGCCAAACGCGCCAAGGCCAAAGCCAAGCAGATCCGCATGGTCGGTCGCAA ACCCCTGGCGCAGGACGATGACCTTGGCCATCTGGCCGAGCCGATCCCGGAATACACCTTGGCGATGTTCAGCAAGATGC GCGACGCCGAAGCCGTCAGCCGCAATGAAATGCTGCTGACGCTGCTGCGTGAGCTGGCGTTTATAATCGTCGATCATCCT GATCTGCTGGACATGGAAAACGCCGAGAACGAAGGCATGGCCGCCACTCACCTGGCCGCCGACATGTTGATCGACTACCG CATGTGGGCCGACGGCATGGATCGCGAGACCGCCCAGGCGTGGCTGAGCGAACCGGAGTTCATCAGCGATTTCGGGATTG CGCTGGACACTTACGGTCAGTCGGTGGAAGCGCAGGAAGAGAAGAGCGAATAA
Upstream 100 bases:
>100_bases TGGCGCTCTGGCGTGGATCGAATCGCCGGATTTCCAAAAAGACTATGTGGCCGCGTCCGACGCAATCGCCGCACAAACCC AACAGAAAAACTGAGTTCCC
Downstream 100 bases:
>100_bases ACCGCTCGCAGTAACAAAAACGGCCGCTTGTCATCACTGACAGCGGCCGTTTTGCGTTATGCGTTGCGGATCAGTTCAGA ACTGCCGCACCACGGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MASLNKQQKRAKRAKAKAKQIRMVGRKPLAQDDDLGHLAEPIPEYTLAMFSKMRDAEAVSRNEMLLTLLRELAFIIVDHP DLLDMENAENEGMAATHLAADMLIDYRMWADGMDRETAQAWLSEPEFISDFGIALDTYGQSVEAQEEKSE
Sequences:
>Translated_150_residues MASLNKQQKRAKRAKAKAKQIRMVGRKPLAQDDDLGHLAEPIPEYTLAMFSKMRDAEAVSRNEMLLTLLRELAFIIVDHP DLLDMENAENEGMAATHLAADMLIDYRMWADGMDRETAQAWLSEPEFISDFGIALDTYGQSVEAQEEKSE >Mature_149_residues ASLNKQQKRAKRAKAKAKQIRMVGRKPLAQDDDLGHLAEPIPEYTLAMFSKMRDAEAVSRNEMLLTLLRELAFIIVDHPD LLDMENAENEGMAATHLAADMLIDYRMWADGMDRETAQAWLSEPEFISDFGIALDTYGQSVEAQEEKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16973; Mature: 16841
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLNKQQKRAKRAKAKAKQIRMVGRKPLAQDDDLGHLAEPIPEYTLAMFSKMRDAEAVS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNEMLLTLLRELAFIIVDHPDLLDMENAENEGMAATHLAADMLIDYRMWADGMDRETAQA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH WLSEPEFISDFGIALDTYGQSVEAQEEKSE HHCCCHHHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure ASLNKQQKRAKRAKAKAKQIRMVGRKPLAQDDDLGHLAEPIPEYTLAMFSKMRDAEAVS CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNEMLLTLLRELAFIIVDHPDLLDMENAENEGMAATHLAADMLIDYRMWADGMDRETAQA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH WLSEPEFISDFGIALDTYGQSVEAQEEKSE HHCCCHHHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA