| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456500
Identifier: 77456500
GI number: 77456500
Start: 317758
End: 318885
Strand: Reverse
Name: 77456500
Synonym: Pfl01_0272
Alternate gene names: NA
Gene position: 318885-317758 (Counterclockwise)
Preceding gene: 77456501
Following gene: 77456499
Centisome position: 4.95
GC content: 55.94
Gene sequence:
>1128_bases ATGACTACACTAACTATTTTCTTCTGCGGTACAGGTTCGACAAAGTTTGATAGCGCCCACGAAAACTACTGGAATGGTGA ATTGGTATCTACACTCGCCTCCCATCACACCGGGCGCGAGTTCGCCGACTGGATCGTGGTCGACGGTCCCGGCACCAGCA ACCTGCAAGCCGATGAACTGTTCACCCAGTCCAAGGACTACGGCCTGAGCGGAACCCTGTTCGGCAAGGGCTGGGAGGAA AACGTTCAGCACGCGATGAACATCATCAAAGGCAAATGCGACTGGCAACGTCAGCAACTGACCGAAACGGAATACAACCG CCTCAAAGCCGCCGGCATTCCGATTGAAGATGTAAAGGTCGAAGGTTCCTGGCTATGGCGCAAATATAACTATGGCGACC GCAGCGTCACCCAACAGAAATTGCAGGAACAAATCATTAAAACCTTCCGCAAGGACGGCGTTATTCCAACGAAGGTCAAT CTGGTGGGCTGGAGCCGCGGCGGTATCAGTTGCCATATGCTGGCCAACGCCATGTTCAATGACAGCATGCTGACAAACAT TCCGGTTAATATCTTCGCCATTGATCCGGTACCCGGCATCGGTAACTTTCAGGAGCACAGGGTTAAACTCAATTACAACG TAAAGGAATACGTGGGCTTTTATGCACGGGACGAACGCTCCAAGGGTTTCAGCTGCGTCATCCCGCAAACCGCGACCGGC ACCAAGACCAGCATCTTCCCGATGCCTGGCCGTCACGCCACTCTGGTCGGTAACGCCTCCGCCGATGGCAACAGTGGTCC CAAAGTGCTGGCCGAACCCGGCCTCATCGTCCGCCACTTTGCCGAGGTCTGCCTGAAACGCTGGGGCACCGTACTCGACA AAAACCTTAACCTCACCGACGCCGACCTTCGCAACCACACCGCCGCCATCGTCAACGCGGCAGCGAAATACAAGGCCATG GAGAAGTGCTCCTACACCTGGTTCACCGAGCTGGATCAAGGCGAACGCTACGTATCGCTGGGCAGCAAAGGCGTGCCGTT CTCGACGGTGAAAGGCGGGATCTACACCCCGGCGACCGGGCTGACGACGAGTGTGCTGGATGTTGAGGGGTATCGGGCGA TTCGTTGA
Upstream 100 bases:
>100_bases GCGCCAGCCACACTTACAAAGTTCGCAACAACCCATCACTTCCATTACTACCAAGTTCAGAACTAGCCTGATCGCTCTTA CATCAATCAAGAGCAACAAC
Downstream 100 bases:
>100_bases GGCGGGACTGGTAACAGACGTCAACACAATCACGGGAGAATTGAACGATGGATAGATCCACTGACGGAATTGAACCTCAC TGCGACGAGGAGGCCTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTTLTIFFCGTGSTKFDSAHENYWNGELVSTLASHHTGREFADWIVVDGPGTSNLQADELFTQSKDYGLSGTLFGKGWEE NVQHAMNIIKGKCDWQRQQLTETEYNRLKAAGIPIEDVKVEGSWLWRKYNYGDRSVTQQKLQEQIIKTFRKDGVIPTKVN LVGWSRGGISCHMLANAMFNDSMLTNIPVNIFAIDPVPGIGNFQEHRVKLNYNVKEYVGFYARDERSKGFSCVIPQTATG TKTSIFPMPGRHATLVGNASADGNSGPKVLAEPGLIVRHFAEVCLKRWGTVLDKNLNLTDADLRNHTAAIVNAAAKYKAM EKCSYTWFTELDQGERYVSLGSKGVPFSTVKGGIYTPATGLTTSVLDVEGYRAIR
Sequences:
>Translated_375_residues MTTLTIFFCGTGSTKFDSAHENYWNGELVSTLASHHTGREFADWIVVDGPGTSNLQADELFTQSKDYGLSGTLFGKGWEE NVQHAMNIIKGKCDWQRQQLTETEYNRLKAAGIPIEDVKVEGSWLWRKYNYGDRSVTQQKLQEQIIKTFRKDGVIPTKVN LVGWSRGGISCHMLANAMFNDSMLTNIPVNIFAIDPVPGIGNFQEHRVKLNYNVKEYVGFYARDERSKGFSCVIPQTATG TKTSIFPMPGRHATLVGNASADGNSGPKVLAEPGLIVRHFAEVCLKRWGTVLDKNLNLTDADLRNHTAAIVNAAAKYKAM EKCSYTWFTELDQGERYVSLGSKGVPFSTVKGGIYTPATGLTTSVLDVEGYRAIR >Mature_374_residues TTLTIFFCGTGSTKFDSAHENYWNGELVSTLASHHTGREFADWIVVDGPGTSNLQADELFTQSKDYGLSGTLFGKGWEEN VQHAMNIIKGKCDWQRQQLTETEYNRLKAAGIPIEDVKVEGSWLWRKYNYGDRSVTQQKLQEQIIKTFRKDGVIPTKVNL VGWSRGGISCHMLANAMFNDSMLTNIPVNIFAIDPVPGIGNFQEHRVKLNYNVKEYVGFYARDERSKGFSCVIPQTATGT KTSIFPMPGRHATLVGNASADGNSGPKVLAEPGLIVRHFAEVCLKRWGTVLDKNLNLTDADLRNHTAAIVNAAAKYKAME KCSYTWFTELDQGERYVSLGSKGVPFSTVKGGIYTPATGLTTSVLDVEGYRAIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41599; Mature: 41467
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLTIFFCGTGSTKFDSAHENYWNGELVSTLASHHTGREFADWIVVDGPGTSNLQADEL CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHH FTQSKDYGLSGTLFGKGWEENVQHAMNIIKGKCDWQRQQLTETEYNRLKAAGIPIEDVKV HHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCHHHEEE EGSWLWRKYNYGDRSVTQQKLQEQIIKTFRKDGVIPTKVNLVGWSRGGISCHMLANAMFN CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEHHHHHC DSMLTNIPVNIFAIDPVPGIGNFQEHRVKLNYNVKEYVGFYARDERSKGFSCVIPQTATG CCEEECCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHEECCCCCCCEEECCCCCCC TKTSIFPMPGRHATLVGNASADGNSGPKVLAEPGLIVRHFAEVCLKRWGTVLDKNLNLTD CCEEEEECCCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC ADLRNHTAAIVNAAAKYKAMEKCSYTWFTELDQGERYVSLGSKGVPFSTVKGGIYTPATG CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCHHHCCCCEECCCCC LTTSVLDVEGYRAIR CEEEEEECCCCCCCC >Mature Secondary Structure TTLTIFFCGTGSTKFDSAHENYWNGELVSTLASHHTGREFADWIVVDGPGTSNLQADEL CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHH FTQSKDYGLSGTLFGKGWEENVQHAMNIIKGKCDWQRQQLTETEYNRLKAAGIPIEDVKV HHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCHHHEEE EGSWLWRKYNYGDRSVTQQKLQEQIIKTFRKDGVIPTKVNLVGWSRGGISCHMLANAMFN CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEHHHHHC DSMLTNIPVNIFAIDPVPGIGNFQEHRVKLNYNVKEYVGFYARDERSKGFSCVIPQTATG CCEEECCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHEECCCCCCCEEECCCCCCC TKTSIFPMPGRHATLVGNASADGNSGPKVLAEPGLIVRHFAEVCLKRWGTVLDKNLNLTD CCEEEEECCCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC ADLRNHTAAIVNAAAKYKAMEKCSYTWFTELDQGERYVSLGSKGVPFSTVKGGIYTPATG CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCHHHCCCCEECCCCC LTTSVLDVEGYRAIR CEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA