| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yghZ [H]
Identifier: 77456480
GI number: 77456480
Start: 297732
End: 298769
Strand: Direct
Name: yghZ [H]
Synonym: Pfl01_0252
Alternate gene names: 77456480
Gene position: 297732-298769 (Clockwise)
Preceding gene: 77456479
Following gene: 77456488
Centisome position: 4.62
GC content: 63.01
Gene sequence:
>1038_bases ATGACTTACACCGCTGCCGAAAACCGCTATGACTCCATCCCTTACCGCCGCGTCGGACGCAGCGGTCTGGTGCTGCCGGC GCTGTCTCTGGGCCTGTGGCACAACTTCGGCGACAGCACGCCGATCGACACCCAGCGCTCGTTGCTGCGCACGGCGTTCG ACCTGGGCATCAACCACTTCGACCTGGCCAACAACTATGGCCCGCCCTACGGCAGCGCCGAGATCAACTTCGGCCGTTTG CTGCGCGAAGACTTCAAGCAGTACCGCGATGAACTGATCATCTCCAGCAAGGCCGGTTGGGACATGTGGCCCGGCCCTTA CGGCCAGGGTGGCGGTTCGCGCAAATACGTGCTGGCCAGCCTCGACCAGAGCCTGCAACGCCTGGGCCTGGACTATGTGG ATATTTTCTATTCGCACCGCTTCGACCCGGACACGCCACTGGAAGAAACCGCCAGCGCCCTTGCCACGGCGGTGCAGCAG GGCAAGGCGCTGTACATCGGCATCTCGTCGTACTCCGGAGTGAAAACCCGCGAAATCGCCGCATTGCTCAAAGAGTGGAA AGTGCCGCTGCTGATCCACCAACCGGCCTACAACCTGCTCAACCGCTGGGTGGAAAAGGACCTGCTCGACACCACCGACG AGCTCGGCACTGGCGTGATTGCCTTCACCCCGCTGGCGCAGGGTCTGCTGACCGACAAATACCTCAACGGCGTGCCGGCG GATGCGCGGGTCAACCGTCCGGGCGGTGGTTCTTTGCAGGCTTCGCACTTGTCCGAGGCCAACATCGCTCACGTTCGGGC GCTGAACGAGATCGCCAAGCGTCGTGGCCAGAGCCTGGCGCAACTGGCATTGGCGTGGACACTGCGGGATCCGCGGGTGA CTTCGGCGCTGATCGGCGCGAGCCGGCCGGAGCAGATTGTCGAGAACGTCGGGGCGTTGAAGAATCTGAGCTTCAGTGCT GAGGAACTGGCGGAGATTGACCGGTTTGCCCAGGAGGGCGGGATCAATCTTTGGGAGAAGCCTTCGACGGCGGAGTGA
Upstream 100 bases:
>100_bases CGAGGGCCGGACCTTGCGCCAGAACCTTGGCCTCGCCCGGCCCGGCAACAGATTTGCGTAGCAATCGACACCTGATTCAA GACCGACAAGAGAGGATTCG
Downstream 100 bases:
>100_bases TCGAAACTGGGGCGGGTCAGATAGATCCCCCCTCACCCCAGCCCTCTCCCCAAGGGGGGGGCGAGGGGGAAAGGGAGCAA ATCTCCGTGCTTTTCAAACC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTYTAAENRYDSIPYRRVGRSGLVLPALSLGLWHNFGDSTPIDTQRSLLRTAFDLGINHFDLANNYGPPYGSAEINFGRL LREDFKQYRDELIISSKAGWDMWPGPYGQGGGSRKYVLASLDQSLQRLGLDYVDIFYSHRFDPDTPLEETASALATAVQQ GKALYIGISSYSGVKTREIAALLKEWKVPLLIHQPAYNLLNRWVEKDLLDTTDELGTGVIAFTPLAQGLLTDKYLNGVPA DARVNRPGGGSLQASHLSEANIAHVRALNEIAKRRGQSLAQLALAWTLRDPRVTSALIGASRPEQIVENVGALKNLSFSA EELAEIDRFAQEGGINLWEKPSTAE
Sequences:
>Translated_345_residues MTYTAAENRYDSIPYRRVGRSGLVLPALSLGLWHNFGDSTPIDTQRSLLRTAFDLGINHFDLANNYGPPYGSAEINFGRL LREDFKQYRDELIISSKAGWDMWPGPYGQGGGSRKYVLASLDQSLQRLGLDYVDIFYSHRFDPDTPLEETASALATAVQQ GKALYIGISSYSGVKTREIAALLKEWKVPLLIHQPAYNLLNRWVEKDLLDTTDELGTGVIAFTPLAQGLLTDKYLNGVPA DARVNRPGGGSLQASHLSEANIAHVRALNEIAKRRGQSLAQLALAWTLRDPRVTSALIGASRPEQIVENVGALKNLSFSA EELAEIDRFAQEGGINLWEKPSTAE >Mature_344_residues TYTAAENRYDSIPYRRVGRSGLVLPALSLGLWHNFGDSTPIDTQRSLLRTAFDLGINHFDLANNYGPPYGSAEINFGRLL REDFKQYRDELIISSKAGWDMWPGPYGQGGGSRKYVLASLDQSLQRLGLDYVDIFYSHRFDPDTPLEETASALATAVQQG KALYIGISSYSGVKTREIAALLKEWKVPLLIHQPAYNLLNRWVEKDLLDTTDELGTGVIAFTPLAQGLLTDKYLNGVPAD ARVNRPGGGSLQASHLSEANIAHVRALNEIAKRRGQSLAQLALAWTLRDPRVTSALIGASRPEQIVENVGALKNLSFSAE ELAEIDRFAQEGGINLWEKPSTAE
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504825, Length=319, Percent_Identity=35.7366771159875, Blast_Score=189, Evalue=2e-48, Organism=Homo sapiens, GI27436969, Length=319, Percent_Identity=35.7366771159875, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI27436966, Length=323, Percent_Identity=34.3653250773994, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI27436964, Length=323, Percent_Identity=34.3653250773994, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI27436962, Length=323, Percent_Identity=34.3653250773994, Blast_Score=185, Evalue=4e-47, Organism=Homo sapiens, GI27436971, Length=329, Percent_Identity=34.9544072948328, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI41327764, Length=242, Percent_Identity=30.9917355371901, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI41152114, Length=116, Percent_Identity=41.3793103448276, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI223718702, Length=242, Percent_Identity=29.7520661157025, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1789375, Length=345, Percent_Identity=66.6666666666667, Blast_Score=468, Evalue=1e-133, Organism=Escherichia coli, GI87081735, Length=325, Percent_Identity=34.4615384615385, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789199, Length=352, Percent_Identity=30.6818181818182, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=29.8136645962733, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1788081, Length=308, Percent_Identity=26.6233766233766, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787674, Length=293, Percent_Identity=25.2559726962457, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=340, Percent_Identity=25.8823529411765, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323998, Length=307, Percent_Identity=27.0358306188925, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=277, Percent_Identity=27.4368231046931, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=253, Percent_Identity=25.296442687747, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=305, Percent_Identity=26.5573770491803, Blast_Score=80, Evalue=7e-16, Organism=Drosophila melanogaster, GI24640980, Length=353, Percent_Identity=27.7620396600567, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI45549126, Length=353, Percent_Identity=27.7620396600567, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24646155, Length=353, Percent_Identity=27.7620396600567, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38045; Mature: 37914
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTAAENRYDSIPYRRVGRSGLVLPALSLGLWHNFGDSTPIDTQRSLLRTAFDLGINHF CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCE DLANNYGPPYGSAEINFGRLLREDFKQYRDELIISSKAGWDMWPGPYGQGGGSRKYVLAS ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHH LDQSLQRLGLDYVDIFYSHRFDPDTPLEETASALATAVQQGKALYIGISSYSGVKTREIA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH ALLKEWKVPLLIHQPAYNLLNRWVEKDLLDTTDELGTGVIAFTPLAQGLLTDKYLNGVPA HHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCC DARVNRPGGGSLQASHLSEANIAHVRALNEIAKRRGQSLAQLALAWTLRDPRVTSALIGA CCEECCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC SRPEQIVENVGALKNLSFSAEELAEIDRFAQEGGINLWEKPSTAE CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TYTAAENRYDSIPYRRVGRSGLVLPALSLGLWHNFGDSTPIDTQRSLLRTAFDLGINHF CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCE DLANNYGPPYGSAEINFGRLLREDFKQYRDELIISSKAGWDMWPGPYGQGGGSRKYVLAS ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHH LDQSLQRLGLDYVDIFYSHRFDPDTPLEETASALATAVQQGKALYIGISSYSGVKTREIA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH ALLKEWKVPLLIHQPAYNLLNRWVEKDLLDTTDELGTGVIAFTPLAQGLLTDKYLNGVPA HHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCC DARVNRPGGGSLQASHLSEANIAHVRALNEIAKRRGQSLAQLALAWTLRDPRVTSALIGA CCEECCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC SRPEQIVENVGALKNLSFSAEELAEIDRFAQEGGINLWEKPSTAE CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]