| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yxeK [H]
Identifier: 77456479
GI number: 77456479
Start: 296373
End: 297692
Strand: Direct
Name: yxeK [H]
Synonym: Pfl01_0251
Alternate gene names: 77456479
Gene position: 296373-297692 (Clockwise)
Preceding gene: 77456478
Following gene: 77456480
Centisome position: 4.6
GC content: 64.55
Gene sequence:
>1320_bases ATGAGCAGACAGCTGAAACTCGGCGCGTTCCTCATGGCCACCGGGCACCACGTCGCCGCGTGGCGTCACCCGAATGTGCC GGCTAACGCCGGGCTGGATTTCGCCCACTACAAACGCCTGGCGCAGATTGCCGAGGCGGCGAAGTTCGACACCTTGTTCG TCGCCGACAGCGTCGCCGCCCCGACCCAGGACATCGCCAGCCGCATGGCCCGTTCCGATCATTTCGAGCCGCTGACCTTG CTCTCGGCACTGAGCGCAGTGACCGAGCACATCGGCCTGATCGCCACCGCCACCACCAGCTACAACGAGCCGTACCACGT GGCGCGTAAATTCGCTTCGCTCGATCACCTGTCCGGCGGGCGGGCGGGGTGGAATCTGGTGACCTCCGACAACGCCGCCG AAGCGCAGAATTTCGGCCGCGACGAACACATCGGCCATGCCGAACGCTACAGCCGCGCCCGGGAATTTCATCAGGTGGTC ACCGGGCTTTGGGACAGTTGGCAGGACGACGCCTTCATTCGCGACAAGGCCAGCGGCGCCTATTACGACCCGGAAAAACT GCACGTGCTGAACCACGTTGGCGAGCACTTCCGGGTCAAAGGCCCGCTGAATGTCGCGCGTTCGCCACAGGGGCAGCCAG TGATCGTGCAGGCCGGCTCGTCGGAAACCGGGCGTGAACTGGCGGCGCAGACGGCCGAAGTGGTGTTCACCGCGCAGACT TCACTGGCCAGCGCCAAGGCCTTCTACGCCGACCTCAAGGGCCGCTTGCCGAAGTATGGACGCAGTGCCGATTCGCTGAA AATCATGCCCGGCGTGTTTGTCGTGGTCGGGCAGACGGAAGCCGAAGCGCAGGAAAAATGTGAAACGTTTCAGCAATTGG TCGAACCCGAGGTGGGCATCGCCCTGCTTGGGCGTATGCTGGGCAACTTCGATCTGTCGAAGTACCCGCTGGACGGGCCG CTGCCGGAATTGCCGCTGACTGACAGCGGCCAGCAAAGCCGACAGAAACTGCTGACCGAACTGGCCGGCCGCGAGCATCT GACCCTGGCCGAACTGGGCCGCAGAATCGCTGGCGGTCGCGGGCATTACAGCGTCGTCGGCACTCCGGCGCAGATTGCCG ACCGTTTGCAGGAATGGTTCGAGCAGGGCGCGGCGGACGGTTTCAACGTGCTGGTGCCACACCTGCCCGGCGGGCTCGAA GACTTCGCCAACGGCGTGGTCCCGGAACTGCAACGGCGTGGGCTGTTCAGAACCGAATACGAGGGCCGGACCTTGCGCCA GAACCTTGGCCTCGCCCGGCCCGGCAACAGATTTGCGTAG
Upstream 100 bases:
>100_bases TATTCGCCATTGCTCGCCAGCGGTGGCAACTACATCTACCGCGCCGTGCCTCGCGACGACGAGCGCTACTTCGGCGTGCA ACTGCGCAAGGACTTCTGAG
Downstream 100 bases:
>100_bases CAATCGACACCTGATTCAAGACCGACAAGAGAGGATTCGATGACTTACACCGCTGCCGAAAACCGCTATGACTCCATCCC TTACCGCCGCGTCGGACGCA
Product: xenobiotic compound monooxygenase A subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSRQLKLGAFLMATGHHVAAWRHPNVPANAGLDFAHYKRLAQIAEAAKFDTLFVADSVAAPTQDIASRMARSDHFEPLTL LSALSAVTEHIGLIATATTSYNEPYHVARKFASLDHLSGGRAGWNLVTSDNAAEAQNFGRDEHIGHAERYSRAREFHQVV TGLWDSWQDDAFIRDKASGAYYDPEKLHVLNHVGEHFRVKGPLNVARSPQGQPVIVQAGSSETGRELAAQTAEVVFTAQT SLASAKAFYADLKGRLPKYGRSADSLKIMPGVFVVVGQTEAEAQEKCETFQQLVEPEVGIALLGRMLGNFDLSKYPLDGP LPELPLTDSGQQSRQKLLTELAGREHLTLAELGRRIAGGRGHYSVVGTPAQIADRLQEWFEQGAADGFNVLVPHLPGGLE DFANGVVPELQRRGLFRTEYEGRTLRQNLGLARPGNRFA
Sequences:
>Translated_439_residues MSRQLKLGAFLMATGHHVAAWRHPNVPANAGLDFAHYKRLAQIAEAAKFDTLFVADSVAAPTQDIASRMARSDHFEPLTL LSALSAVTEHIGLIATATTSYNEPYHVARKFASLDHLSGGRAGWNLVTSDNAAEAQNFGRDEHIGHAERYSRAREFHQVV TGLWDSWQDDAFIRDKASGAYYDPEKLHVLNHVGEHFRVKGPLNVARSPQGQPVIVQAGSSETGRELAAQTAEVVFTAQT SLASAKAFYADLKGRLPKYGRSADSLKIMPGVFVVVGQTEAEAQEKCETFQQLVEPEVGIALLGRMLGNFDLSKYPLDGP LPELPLTDSGQQSRQKLLTELAGREHLTLAELGRRIAGGRGHYSVVGTPAQIADRLQEWFEQGAADGFNVLVPHLPGGLE DFANGVVPELQRRGLFRTEYEGRTLRQNLGLARPGNRFA >Mature_438_residues SRQLKLGAFLMATGHHVAAWRHPNVPANAGLDFAHYKRLAQIAEAAKFDTLFVADSVAAPTQDIASRMARSDHFEPLTLL SALSAVTEHIGLIATATTSYNEPYHVARKFASLDHLSGGRAGWNLVTSDNAAEAQNFGRDEHIGHAERYSRAREFHQVVT GLWDSWQDDAFIRDKASGAYYDPEKLHVLNHVGEHFRVKGPLNVARSPQGQPVIVQAGSSETGRELAAQTAEVVFTAQTS LASAKAFYADLKGRLPKYGRSADSLKIMPGVFVVVGQTEAEAQEKCETFQQLVEPEVGIALLGRMLGNFDLSKYPLDGPL PELPLTDSGQQSRQKLLTELAGREHLTLAELGRRIAGGRGHYSVVGTPAQIADRLQEWFEQGAADGFNVLVPHLPGGLED FANGVVPELQRRGLFRTEYEGRTLRQNLGLARPGNRFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1787247, Length=226, Percent_Identity=27.8761061946903, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 47990; Mature: 47858
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQLKLGAFLMATGHHVAAWRHPNVPANAGLDFAHYKRLAQIAEAAKFDTLFVADSVAA CCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCC PTQDIASRMARSDHFEPLTLLSALSAVTEHIGLIATATTSYNEPYHVARKFASLDHLSGG CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCCC RAGWNLVTSDNAAEAQNFGRDEHIGHAERYSRAREFHQVVTGLWDSWQDDAFIRDKASGA CCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC YYDPEKLHVLNHVGEHFRVKGPLNVARSPQGQPVIVQAGSSETGRELAAQTAEVVFTAQT CCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEHH SLASAKAFYADLKGRLPKYGRSADSLKIMPGVFVVVGQTEAEAQEKCETFQQLVEPEVGI HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCHHH ALLGRMLGNFDLSKYPLDGPLPELPLTDSGQQSRQKLLTELAGREHLTLAELGRRIAGGR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCCC GHYSVVGTPAQIADRLQEWFEQGAADGFNVLVPHLPGGLEDFANGVVPELQRRGLFRTEY CCEEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHCCCHHHHHHCCCCEECC EGRTLRQNLGLARPGNRFA CCHHHHHHCCCCCCCCCCC >Mature Secondary Structure SRQLKLGAFLMATGHHVAAWRHPNVPANAGLDFAHYKRLAQIAEAAKFDTLFVADSVAA CCCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCC PTQDIASRMARSDHFEPLTLLSALSAVTEHIGLIATATTSYNEPYHVARKFASLDHLSGG CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCCC RAGWNLVTSDNAAEAQNFGRDEHIGHAERYSRAREFHQVVTGLWDSWQDDAFIRDKASGA CCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC YYDPEKLHVLNHVGEHFRVKGPLNVARSPQGQPVIVQAGSSETGRELAAQTAEVVFTAQT CCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEHH SLASAKAFYADLKGRLPKYGRSADSLKIMPGVFVVVGQTEAEAQEKCETFQQLVEPEVGI HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCHHH ALLGRMLGNFDLSKYPLDGPLPELPLTDSGQQSRQKLLTELAGREHLTLAELGRRIAGGR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCCC GHYSVVGTPAQIADRLQEWFEQGAADGFNVLVPHLPGGLEDFANGVVPELQRRGLFRTEY CCEEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHCCCHHHHHHCCCCEECC EGRTLRQNLGLARPGNRFA CCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]