| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ssuA [H]
Identifier: 77456439
GI number: 77456439
Start: 251198
End: 252211
Strand: Direct
Name: ssuA [H]
Synonym: Pfl01_0211
Alternate gene names: 77456439
Gene position: 251198-252211 (Clockwise)
Preceding gene: 77456435
Following gene: 77456441
Centisome position: 3.9
GC content: 61.14
Gene sequence:
>1014_bases ATGAACCTTCCCTTCAAACGTGTCATCAGTCTGTTTGCCGCGCCGGCACTGGCGGGTCTGCTGGCGTTCTCTGCCCAGGC CGACGAGCTCAAGGAAATCAGGATTGCCGTGCCTGATCTGAGCGCCGGTACCCAGCACAGCGGCGGGGGCATCGTGGACG TGCTGCGCGATCAGCAGATCTTTGAAAAGGCCTTCGCCGATCAAGGCATCAAGATTCAGTGGAGCTTCTTCAAGGGCGCC GGACCTGTGATCAACGAGGCATTCGCCAACGGCCAGGTGGATCTGGCCTATCTCGGAGATCTGGCGGCCATCATCGGCAA GTCCAACGGTCTGGACACGCGTCTGCTCAGCGCCAGCGCCCGGGGTGTGAAGCAATATCTCGGCGTCGTGCCGGGTTCGG GGATCAAGACGCTGCAGGATCTCAAAGGCAAGCGCGTAGCGATCTTCCGGGGCACTGCGACCCAGTTGTCGTTCGATGCG GCGCTGGCCAGCGTCGGTTTGAGCGAGAAGGACGTGAAGGTGATCAACCTCGATTTCAACGCAGCGGTTGCTGCACTGGC GGCGAAGCAGATCGATGCATCGTGGGGCAGCTCCGGGCTGACTGCATTGCAGGCCAAAGGACTGGCTGAGCTGCCATTGA ATACCAAGGATCTCGGTGGCGCCGGCAGTGTGCAGTCGGTTCTGGTGGGCACCGGCAAGTTTGTCGACGGGCATCCGGAA GCCGTGGCGAAGCTGCTCAAGGCGCAGCAGCAGGCGGTGGAGTGGTTGACGCAGGACAGCAACAAGGACGCCTATGTGCA GCTTGTGTCGGGGCTGGCGAGCTATCCACCGGTGATCCTCACCCAGGATCTGAAGGATCAGAACCTGAGCGAAGTCTTCC CTTCGACACTGGATCCGCTGTTCCTCGAAAACCTGCAGGGCAAGGTGGATCTGGCGGCGCAGCAGAAGCTGATTCGCAAG CCGTTCAAGGTCAACGAGTGGGTGGCGCCTGAGCTGGCAGCTGCGAAGCTCTGA
Upstream 100 bases:
>100_bases TGAAAAGCTATAAAAATGTGCTTTTTAAGTATTTAAGCGCTGATACGGATTGCGCCTACTTTCGGCTCCTCAATGCCCGC CGTGATCAGGAGCCGCACCC
Downstream 100 bases:
>100_bases GTCATGCGGTCATTCCCGCGCAAGGCGTGGGAATGACCCTCATACCGCGACGCTGATCGCCTGCTTATCCACCGCCACCA ACGTCTCGATCATCGCCCGC
Product: sulfate ester transport system substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MNLPFKRVISLFAAPALAGLLAFSAQADELKEIRIAVPDLSAGTQHSGGGIVDVLRDQQIFEKAFADQGIKIQWSFFKGA GPVINEAFANGQVDLAYLGDLAAIIGKSNGLDTRLLSASARGVKQYLGVVPGSGIKTLQDLKGKRVAIFRGTATQLSFDA ALASVGLSEKDVKVINLDFNAAVAALAAKQIDASWGSSGLTALQAKGLAELPLNTKDLGGAGSVQSVLVGTGKFVDGHPE AVAKLLKAQQQAVEWLTQDSNKDAYVQLVSGLASYPPVILTQDLKDQNLSEVFPSTLDPLFLENLQGKVDLAAQQKLIRK PFKVNEWVAPELAAAKL
Sequences:
>Translated_337_residues MNLPFKRVISLFAAPALAGLLAFSAQADELKEIRIAVPDLSAGTQHSGGGIVDVLRDQQIFEKAFADQGIKIQWSFFKGA GPVINEAFANGQVDLAYLGDLAAIIGKSNGLDTRLLSASARGVKQYLGVVPGSGIKTLQDLKGKRVAIFRGTATQLSFDA ALASVGLSEKDVKVINLDFNAAVAALAAKQIDASWGSSGLTALQAKGLAELPLNTKDLGGAGSVQSVLVGTGKFVDGHPE AVAKLLKAQQQAVEWLTQDSNKDAYVQLVSGLASYPPVILTQDLKDQNLSEVFPSTLDPLFLENLQGKVDLAAQQKLIRK PFKVNEWVAPELAAAKL >Mature_337_residues MNLPFKRVISLFAAPALAGLLAFSAQADELKEIRIAVPDLSAGTQHSGGGIVDVLRDQQIFEKAFADQGIKIQWSFFKGA GPVINEAFANGQVDLAYLGDLAAIIGKSNGLDTRLLSASARGVKQYLGVVPGSGIKTLQDLKGKRVAIFRGTATQLSFDA ALASVGLSEKDVKVINLDFNAAVAALAAKQIDASWGSSGLTALQAKGLAELPLNTKDLGGAGSVQSVLVGTGKFVDGHPE AVAKLLKAQQQAVEWLTQDSNKDAYVQLVSGLASYPPVILTQDLKDQNLSEVFPSTLDPLFLENLQGKVDLAAQQKLIRK PFKVNEWVAPELAAAKL
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 35573; Mature: 35573
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPFKRVISLFAAPALAGLLAFSAQADELKEIRIAVPDLSAGTQHSGGGIVDVLRDQQI CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHH FEKAFADQGIKIQWSFFKGAGPVINEAFANGQVDLAYLGDLAAIIGKSNGLDTRLLSASA HHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHH RGVKQYLGVVPGSGIKTLQDLKGKRVAIFRGTATQLSFDAALASVGLSEKDVKVINLDFN HHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECHH AAVAALAAKQIDASWGSSGLTALQAKGLAELPLNTKDLGGAGSVQSVLVGTGKFVDGHPE HHHHHHHHHHHHCCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCHHHHHEECCCCCCCCHH AVAKLLKAQQQAVEWLTQDSNKDAYVQLVSGLASYPPVILTQDLKDQNLSEVFPSTLDPL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCHH FLENLQGKVDLAAQQKLIRKPFKVNEWVAPELAAAKL HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MNLPFKRVISLFAAPALAGLLAFSAQADELKEIRIAVPDLSAGTQHSGGGIVDVLRDQQI CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHH FEKAFADQGIKIQWSFFKGAGPVINEAFANGQVDLAYLGDLAAIIGKSNGLDTRLLSASA HHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHH RGVKQYLGVVPGSGIKTLQDLKGKRVAIFRGTATQLSFDAALASVGLSEKDVKVINLDFN HHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECHH AAVAALAAKQIDASWGSSGLTALQAKGLAELPLNTKDLGGAGSVQSVLVGTGKFVDGHPE HHHHHHHHHHHHCCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCHHHHHEECCCCCCCCHH AVAKLLKAQQQAVEWLTQDSNKDAYVQLVSGLASYPPVILTQDLKDQNLSEVFPSTLDPL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCHH FLENLQGKVDLAAQQKLIRKPFKVNEWVAPELAAAKL HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]