| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456383
Identifier: 77456383
GI number: 77456383
Start: 187061
End: 187648
Strand: Reverse
Name: 77456383
Synonym: Pfl01_0155
Alternate gene names: NA
Gene position: 187648-187061 (Counterclockwise)
Preceding gene: 77456386
Following gene: 77456382
Centisome position: 2.91
GC content: 62.41
Gene sequence:
>588_bases ATGGAAGTCTTTATGGGTACGATTCAACCGTTTGCCTTCAACTTCGCCCCGAGTGGCTGGGCCTTGTGCAACGGGCAAAT CCTGGGCATCTCGCAATACCAGGCGCTGTTCGCCTTGCTGGGCACTTACTACGGCGGCAATGGCACGACCAACTTTCAAC TGCCCAACCTGCAAGGTCGCGTGCCTGTCGCACAAGGCACCGGACTGGGCCTGACACCGCGCGTCATCGGTCAGGTGTAC GGCACCGAAAACGTCACCGCCACCATCGCCAACATGCCCAATCACACCCACGCCATGACCGGCCTGACGGCCAACACGGC CCTTTCGCTGGCAGTACCCGCCAGCAATCCGGCGACTGTGCCCACCGCCACCAATTCGTACATCGGCGCGTCCGGCGGCG GCCCTGGTTCGGCGAATATCTATTCCGACGCCCAAGGTGCCACACCGGTACCGCTCAAGGGTGTGACCACCACCGTCACC GGGGACATTTCCTCCACCGGCGGCAGCCAGCCACTGCCGATCCTGAACCCGGCCCTGGTCCTTAACTTCAGCATTGCCCT GAACGGTCTGTTCCCGTCGCGCAACTGA
Upstream 100 bases:
>100_bases TGCCCGCGCAAAAGGAAGGAGTCAGCACAACGTTTCGACCGGCCCGACAACAAGGGCGACCGCGCGGCGCGCCGACCACA CAACAGAAGGATGAGGAACC
Downstream 100 bases:
>100_bases GTAAACGCCGGGGGCTTGATGGCCCCCGGCCGTTCTTTTTTCACTGGAGTCAAACCATGCTGCAAGCGGTGCAGATCCAA CATGTCCAGCCGTTGCTGGG
Product: Phage tail Collar
Products: NA
Alternate protein names: Phage Tail Collar; Tail Collar Domain-Containing Protein; Phage Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Microcystin Dependent Protein MdpB; Phage Tail Collar Domain Family; Microcystin Dependent; Phenylacrylic Acid Decarboxylase
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MEVFMGTIQPFAFNFAPSGWALCNGQILGISQYQALFALLGTYYGGNGTTNFQLPNLQGRVPVAQGTGLGLTPRVIGQVY GTENVTATIANMPNHTHAMTGLTANTALSLAVPASNPATVPTATNSYIGASGGGPGSANIYSDAQGATPVPLKGVTTTVT GDISSTGGSQPLPILNPALVLNFSIALNGLFPSRN
Sequences:
>Translated_195_residues MEVFMGTIQPFAFNFAPSGWALCNGQILGISQYQALFALLGTYYGGNGTTNFQLPNLQGRVPVAQGTGLGLTPRVIGQVY GTENVTATIANMPNHTHAMTGLTANTALSLAVPASNPATVPTATNSYIGASGGGPGSANIYSDAQGATPVPLKGVTTTVT GDISSTGGSQPLPILNPALVLNFSIALNGLFPSRN >Mature_195_residues MEVFMGTIQPFAFNFAPSGWALCNGQILGISQYQALFALLGTYYGGNGTTNFQLPNLQGRVPVAQGTGLGLTPRVIGQVY GTENVTATIANMPNHTHAMTGLTANTALSLAVPASNPATVPTATNSYIGASGGGPGSANIYSDAQGATPVPLKGVTTTVT GDISSTGGSQPLPILNPALVLNFSIALNGLFPSRN
Specific function: Unknown
COG id: COG4675
COG function: function code S; Microcystin-dependent protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19813; Mature: 19813
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVFMGTIQPFAFNFAPSGWALCNGQILGISQYQALFALLGTYYGGNGTTNFQLPNLQGR CCEEECCCCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC VPVAQGTGLGLTPRVIGQVYGTENVTATIANMPNHTHAMTGLTANTALSLAVPASNPATV EEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCC PTATNSYIGASGGGPGSANIYSDAQGATPVPLKGVTTTVTGDISSTGGSQPLPILNPALV CCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEE LNFSIALNGLFPSRN EEEEEEEEECCCCCC >Mature Secondary Structure MEVFMGTIQPFAFNFAPSGWALCNGQILGISQYQALFALLGTYYGGNGTTNFQLPNLQGR CCEEECCCCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC VPVAQGTGLGLTPRVIGQVYGTENVTATIANMPNHTHAMTGLTANTALSLAVPASNPATV EEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCC PTATNSYIGASGGGPGSANIYSDAQGATPVPLKGVTTTVTGDISSTGGSQPLPILNPALV CCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEE LNFSIALNGLFPSRN EEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA