| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456375
Identifier: 77456375
GI number: 77456375
Start: 177213
End: 179309
Strand: Direct
Name: 77456375
Synonym: Pfl01_0147
Alternate gene names: NA
Gene position: 177213-179309 (Clockwise)
Preceding gene: 77456374
Following gene: 77456376
Centisome position: 2.75
GC content: 65.19
Gene sequence:
>2097_bases ATGACCCTGCCGAACCTGCGTGCCGACCTGCAATTGTCGCCCGCGGCGCCGGCATTGGACGGTTCGCCGCGCTGGACCCT GGCCGACCCGGTGCGCGGGCGCTACTTCAAGCTTGGCGCGGCGGCGATGCGCCTGTTGCGTCACTGGTCGCTGGGCGATC CCGAACAAGTGCTGCGCGCTGCCAATCGTGAACCGGGTTTGCCGCTGGACGGCGTCGAGCTGGAGCAACTGCTGACGTTC CTGCGCGGGCATGACCTGATCAGCGCCCTCGACGATCAGCAACGCGCCAGTTACTCACTCAAGGCCCTCGCGCAACGCCA GAGCCTGTGGACAATCCTGCTGCATCAATACCTGTTTTTCCGCATTCCGCTGTGGCGGCCGGATGCCTTTCTCAATCGGG CGTGGCCGTGGCTGGAGCGCTTTGGGCCAAGGGTTTTGCGCTACGTTCTGCCGGCGACCCTGGCGCTCGGGGTGTTTCTG GTGTCGCGGGACTGGCAGCGGTTTGTCGGCACCTTTCCGCATCTGTTCAGCCTCGGTGGCGCGATCGCGTTCGGCATCTC GCTGTTTTTTGCCAAGCTCTGTCACGAATTCGGTCATGCATTCATGGCCAAGCGCGCCGGGTGTCGGGTGCAAAGCATGG GCGTGGCGTTCATGGTCTTGCTGCCGATGTTCTACACCGATGTCAGCGATGCCTGGCGGGTCAATGATCGACGCGCGCGA CTGCTGATCGGTGCCGGCGGGGTGCTGGCGGAGTTGCTGTTGGCGAGCATCGCGCTGCTGGTCTGGTCGTTCCTGCCGGA CGGGCCCGGTCGCACGGCGGCGTTCATGCTCGCCAGCGCGACCTGGATCACCACGCTGGTGGTCAATCTCAACCCGTTCA TGCGATTTGATGGCTACTTTCTGCTCAGCGATTTGTGGGAGGTCGACAACCTTCAGGGCCGGGCCTTTGCCTTTTGCCGC TGGCGCCTGCGTGAGTTCTTGTTCGGCTATGGCGCGCCGGCGCCGGAGCCTTGGTCGCCGACGATGCAGCGGCGTTTGCT GATCTGGGGGTATGGCTCGTGGTTATGGCGTGCGGCGTTGTTTTTCGGGATCGCGCTGGCGGTCTATCACCTGTTCTTCA AGGTGTTGGGGATCTTCCTGATGCTGGTCGAGCTGGTGTGGTTCATCTTCCTGCCAATCATGAGTGAGTGGCGCCAGTGG TGGAGCCGCCGCGAACAGGCTCATGGTCCCCGCGTGTTGCTCAGCAGCCTGGCGGTACTCGGCCTGTTGCTGGTGCTGAT CGTGCCGTGGCGCAGCTCGGTCGAATTGCCGACGATGCTCGAGGGCGGTCGCGCCAGTGCCTTGCACGCACCGACGGCGG CGCGGGTCAAAGCCGTGAGGGTGGCGGATGGTCAGACCGTGGCTCAGGGCGACGTGCTGATCGAATTGGAATCGCCGGAC CTCGATTCGCGGCAGGCCATCGTCCGCCGGGAAATCCGCATTCAGCAATTGCTGATGCGCCGTCAGGCCGGCCGCAGTGA AACCGCTGCCGACGCCGGCATCGTCGAGCAGCGTCTCGCCGAAGCGGTGGCGGAATATCGCGGCCTGACCGCCCAACGCG AACGTCTGCTGTTACGCGCGCCCCACGCCGGCACCGTGCGTGATCTGCTGCCGAACCTGACGCCGGGCCGCTGGCTGTCG AGCAAGGATGCGCTGGCGCGGGTGGTCGAAGACGGCACGCGACTGCGCGGTTATCTGGCCGAGGCCGAACTGTGGCGAGT CAAGCCCGGCGCCACCGGGCGGTTTATCGCCGACGACCCGATGCATGCCGCCATCGCGGTGCAACTCAATGAAATCGACA CCAACGGTGTGGCCTATGTCGATCAGGAAGCGCTGACTTCCGATCACCACGGGCCGATTGCCGTGCGCCGCGATCAACAG CATCGAGCGGAACCGGTGCAGGCGCAATATGGCGTGCGTTTGACTACGCTGGATCAGGCAGCGACCCCGGTGCAACCGCT GCGCGGCGTGGTGGTGTTGCAGGGCAGTGGCGAGTCGGTGCTCGGCGTGGCCTGGCGCCGGATGGCGGCGCTGGGGGTCA GGGAAAGCGGTTTCTAG
Upstream 100 bases:
>100_bases CCTGCGCGGCACCGCAAAAATTTTCGGCGAGCGTGCGCCGCTGGCACTGTACCTGCTGCGGCGTCCGCTCGCCGGACTGC GCCAGAGCGTAGGTCTGTAA
Downstream 100 bases:
>100_bases GGAGCGTGAAGATGACGGAAAACCTGGCGGCGGACGGATTGGTGGTGCGGCCTTCGCGGGCGTCGGACGGGCCGTTTCTG CAAAGCTTGTATCAATCGGC
Product: peptidase M50
Products: NA
Alternate protein names: M50 Family Peptidase; Peptidase; Peptidase Family M; HlyD Domain-Containing Protein; Membrane-Fusion Protein; Membrane-Fusion Protein Contains Peptidase Family; Zinc Metallopeptidase Family Protein; Transmembrane Protein; Membrane-Fusion Domain; Zn-Dependent Protease; Zinc Metallopeptidase; Secretion Protein HlyD Family Protein; Membrane Zinc Metallopeptidase
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MTLPNLRADLQLSPAAPALDGSPRWTLADPVRGRYFKLGAAAMRLLRHWSLGDPEQVLRAANREPGLPLDGVELEQLLTF LRGHDLISALDDQQRASYSLKALAQRQSLWTILLHQYLFFRIPLWRPDAFLNRAWPWLERFGPRVLRYVLPATLALGVFL VSRDWQRFVGTFPHLFSLGGAIAFGISLFFAKLCHEFGHAFMAKRAGCRVQSMGVAFMVLLPMFYTDVSDAWRVNDRRAR LLIGAGGVLAELLLASIALLVWSFLPDGPGRTAAFMLASATWITTLVVNLNPFMRFDGYFLLSDLWEVDNLQGRAFAFCR WRLREFLFGYGAPAPEPWSPTMQRRLLIWGYGSWLWRAALFFGIALAVYHLFFKVLGIFLMLVELVWFIFLPIMSEWRQW WSRREQAHGPRVLLSSLAVLGLLLVLIVPWRSSVELPTMLEGGRASALHAPTAARVKAVRVADGQTVAQGDVLIELESPD LDSRQAIVRREIRIQQLLMRRQAGRSETAADAGIVEQRLAEAVAEYRGLTAQRERLLLRAPHAGTVRDLLPNLTPGRWLS SKDALARVVEDGTRLRGYLAEAELWRVKPGATGRFIADDPMHAAIAVQLNEIDTNGVAYVDQEALTSDHHGPIAVRRDQQ HRAEPVQAQYGVRLTTLDQAATPVQPLRGVVVLQGSGESVLGVAWRRMAALGVRESGF
Sequences:
>Translated_698_residues MTLPNLRADLQLSPAAPALDGSPRWTLADPVRGRYFKLGAAAMRLLRHWSLGDPEQVLRAANREPGLPLDGVELEQLLTF LRGHDLISALDDQQRASYSLKALAQRQSLWTILLHQYLFFRIPLWRPDAFLNRAWPWLERFGPRVLRYVLPATLALGVFL VSRDWQRFVGTFPHLFSLGGAIAFGISLFFAKLCHEFGHAFMAKRAGCRVQSMGVAFMVLLPMFYTDVSDAWRVNDRRAR LLIGAGGVLAELLLASIALLVWSFLPDGPGRTAAFMLASATWITTLVVNLNPFMRFDGYFLLSDLWEVDNLQGRAFAFCR WRLREFLFGYGAPAPEPWSPTMQRRLLIWGYGSWLWRAALFFGIALAVYHLFFKVLGIFLMLVELVWFIFLPIMSEWRQW WSRREQAHGPRVLLSSLAVLGLLLVLIVPWRSSVELPTMLEGGRASALHAPTAARVKAVRVADGQTVAQGDVLIELESPD LDSRQAIVRREIRIQQLLMRRQAGRSETAADAGIVEQRLAEAVAEYRGLTAQRERLLLRAPHAGTVRDLLPNLTPGRWLS SKDALARVVEDGTRLRGYLAEAELWRVKPGATGRFIADDPMHAAIAVQLNEIDTNGVAYVDQEALTSDHHGPIAVRRDQQ HRAEPVQAQYGVRLTTLDQAATPVQPLRGVVVLQGSGESVLGVAWRRMAALGVRESGF >Mature_697_residues TLPNLRADLQLSPAAPALDGSPRWTLADPVRGRYFKLGAAAMRLLRHWSLGDPEQVLRAANREPGLPLDGVELEQLLTFL RGHDLISALDDQQRASYSLKALAQRQSLWTILLHQYLFFRIPLWRPDAFLNRAWPWLERFGPRVLRYVLPATLALGVFLV SRDWQRFVGTFPHLFSLGGAIAFGISLFFAKLCHEFGHAFMAKRAGCRVQSMGVAFMVLLPMFYTDVSDAWRVNDRRARL LIGAGGVLAELLLASIALLVWSFLPDGPGRTAAFMLASATWITTLVVNLNPFMRFDGYFLLSDLWEVDNLQGRAFAFCRW RLREFLFGYGAPAPEPWSPTMQRRLLIWGYGSWLWRAALFFGIALAVYHLFFKVLGIFLMLVELVWFIFLPIMSEWRQWW SRREQAHGPRVLLSSLAVLGLLLVLIVPWRSSVELPTMLEGGRASALHAPTAARVKAVRVADGQTVAQGDVLIELESPDL DSRQAIVRREIRIQQLLMRRQAGRSETAADAGIVEQRLAEAVAEYRGLTAQRERLLLRAPHAGTVRDLLPNLTPGRWLSS KDALARVVEDGTRLRGYLAEAELWRVKPGATGRFIADDPMHAAIAVQLNEIDTNGVAYVDQEALTSDHHGPIAVRRDQQH RAEPVQAQYGVRLTTLDQAATPVQPLRGVVVLQGSGESVLGVAWRRMAALGVRESGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78304; Mature: 78173
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPNLRADLQLSPAAPALDGSPRWTLADPVRGRYFKLGAAAMRLLRHWSLGDPEQVLRA CCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH ANREPGLPLDGVELEQLLTFLRGHDLISALDDQQRASYSLKALAQRQSLWTILLHQYLFF CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIPLWRPDAFLNRAWPWLERFGPRVLRYVLPATLALGVFLVSRDWQRFVGTFPHLFSLGG HCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AIAFGISLFFAKLCHEFGHAFMAKRAGCRVQSMGVAFMVLLPMFYTDVSDAWRVNDRRAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEE LLIGAGGVLAELLLASIALLVWSFLPDGPGRTAAFMLASATWITTLVVNLNPFMRFDGYF EEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCH LLSDLWEVDNLQGRAFAFCRWRLREFLFGYGAPAPEPWSPTMQRRLLIWGYGSWLWRAAL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEECHHHHHHHHH FFGIALAVYHLFFKVLGIFLMLVELVWFIFLPIMSEWRQWWSRREQAHGPRVLLSSLAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GLLLVLIVPWRSSVELPTMLEGGRASALHAPTAARVKAVRVADGQTVAQGDVLIELESPD HHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHEEEEEEECCCEEECCCEEEEECCCC LDSRQAIVRREIRIQQLLMRRQAGRSETAADAGIVEQRLAEAVAEYRGLTAQRERLLLRA CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEC PHAGTVRDLLPNLTPGRWLSSKDALARVVEDGTRLRGYLAEAELWRVKPGATGRFIADDP CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCEEECCC MHAAIAVQLNEIDTNGVAYVDQEALTSDHHGPIAVRRDQQHRAEPVQAQYGVRLTTLDQA CCEEEEEEEEECCCCCCEEECHHHHCCCCCCCEEEECCHHHCCCCCHHHHCEEEEECCCC ATPVQPLRGVVVLQGSGESVLGVAWRRMAALGVRESGF CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLPNLRADLQLSPAAPALDGSPRWTLADPVRGRYFKLGAAAMRLLRHWSLGDPEQVLRA CCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH ANREPGLPLDGVELEQLLTFLRGHDLISALDDQQRASYSLKALAQRQSLWTILLHQYLFF CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIPLWRPDAFLNRAWPWLERFGPRVLRYVLPATLALGVFLVSRDWQRFVGTFPHLFSLGG HCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AIAFGISLFFAKLCHEFGHAFMAKRAGCRVQSMGVAFMVLLPMFYTDVSDAWRVNDRRAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEE LLIGAGGVLAELLLASIALLVWSFLPDGPGRTAAFMLASATWITTLVVNLNPFMRFDGYF EEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCH LLSDLWEVDNLQGRAFAFCRWRLREFLFGYGAPAPEPWSPTMQRRLLIWGYGSWLWRAAL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEECHHHHHHHHH FFGIALAVYHLFFKVLGIFLMLVELVWFIFLPIMSEWRQWWSRREQAHGPRVLLSSLAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GLLLVLIVPWRSSVELPTMLEGGRASALHAPTAARVKAVRVADGQTVAQGDVLIELESPD HHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHEEEEEEECCCEEECCCEEEEECCCC LDSRQAIVRREIRIQQLLMRRQAGRSETAADAGIVEQRLAEAVAEYRGLTAQRERLLLRA CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEC PHAGTVRDLLPNLTPGRWLSSKDALARVVEDGTRLRGYLAEAELWRVKPGATGRFIADDP CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCEEECCC MHAAIAVQLNEIDTNGVAYVDQEALTSDHHGPIAVRRDQQHRAEPVQAQYGVRLTTLDQA CCEEEEEEEEECCCCCCEEECHHHHCCCCCCCEEEECCHHHCCCCCHHHHCEEEEECCCC ATPVQPLRGVVVLQGSGESVLGVAWRRMAALGVRESGF CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA