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The map label for this gene is bphR [H]

Identifier: 77456357

GI number: 77456357

Start: 140922

End: 141632

Strand: Reverse

Name: bphR [H]

Synonym: Pfl01_0129

Alternate gene names: 77456357

Gene position: 141632-140922 (Counterclockwise)

Preceding gene: 77456360

Following gene: 77456356

Centisome position: 2.2

GC content: 64.28

Gene sequence:

>711_bases
GTGACCCAGAAGCCCAAGCCACTCCACAGCATCAAAGTCGACGGCCCGATTCCCGCGCATCTGGCACGCTCGGTCATCGA
AGAAACCCTGCGCGCCGCGATTCTCGACGGGCGCCTGCCCTGCGGCACCGCCGTGCGCCAGCAGGATCTGGCCGATCTGT
TCGGCGTCAGCCGCATGCCGGTACGCGAAGCCTTGCGTCAACTCGAAGCCCAGGGCCTGCTCAACGTGATTGCCCACAAA
GGCGCGGTGGTGGCGCCGCTGATCCAGGGCGATGCAACGGAAACCTACGAGCTGCGCATCCTGCTGGAGTCCGAAGCGCT
GCGCCAGTCGATCCCGCTGCTGTCCCCGGCCGATCACGAACGCGCGGCCGGCTACATCGAAGAACTGGAAATCGAACACG
ACTACACCGAAATCGGTCGGCTCAACCGTCTGTTTCACATGGCACTCTACAGCAAGGCGCCCAATGGCCGGCTGTTGCGG
CTGGTGGAAGACGGCTTGAATGAGGAAGAACGCTTCCTGCGCTTCAACCTCGAGGCCATGGGCCTGGGCAAGCTCTCCCA
GGACGATCACCGCGCGTTGTTGCAGGCCGTGAAAGAGCGTGACACACCGCACGCCGTGACACTGCTGGAGCAGCACCTCA
ATCGCGGTGTCGAGGTGATCACCCGTTACCTGGCCAGCTCCGCCGGCCAAAGCCGCAAAGCGGCGCGCTGA

Upstream 100 bases:

>100_bases
ACTTCAGATGTGACAGGGTTCTTCTACACGGTTTGACAACCTGTAGAGCAATCACTAGTGTCCTTTGGATCCAAATATCG
CAGTCATAGGGTGTGCAGTT

Downstream 100 bases:

>100_bases
ATCCTCCCTCCCGGGTGAGCCTCCACTCACCCGGCGAATAACCCGCTTACAAATCCCCCCACCGGTCACGGTCATTTGCC
GTGGCACATCGATGCCTGCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTQKPKPLHSIKVDGPIPAHLARSVIEETLRAAILDGRLPCGTAVRQQDLADLFGVSRMPVREALRQLEAQGLLNVIAHK
GAVVAPLIQGDATETYELRILLESEALRQSIPLLSPADHERAAGYIEELEIEHDYTEIGRLNRLFHMALYSKAPNGRLLR
LVEDGLNEEERFLRFNLEAMGLGKLSQDDHRALLQAVKERDTPHAVTLLEQHLNRGVEVITRYLASSAGQSRKAAR

Sequences:

>Translated_236_residues
MTQKPKPLHSIKVDGPIPAHLARSVIEETLRAAILDGRLPCGTAVRQQDLADLFGVSRMPVREALRQLEAQGLLNVIAHK
GAVVAPLIQGDATETYELRILLESEALRQSIPLLSPADHERAAGYIEELEIEHDYTEIGRLNRLFHMALYSKAPNGRLLR
LVEDGLNEEERFLRFNLEAMGLGKLSQDDHRALLQAVKERDTPHAVTLLEQHLNRGVEVITRYLASSAGQSRKAAR
>Mature_235_residues
TQKPKPLHSIKVDGPIPAHLARSVIEETLRAAILDGRLPCGTAVRQQDLADLFGVSRMPVREALRQLEAQGLLNVIAHKG
AVVAPLIQGDATETYELRILLESEALRQSIPLLSPADHERAAGYIEELEIEHDYTEIGRLNRLFHMALYSKAPNGRLLRL
VEDGLNEEERFLRFNLEAMGLGKLSQDDHRALLQAVKERDTPHAVTLLEQHLNRGVEVITRYLASSAGQSRKAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26308; Mature: 26176

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50949 HTH_GNTR ; PS00527 RIBOSOMAL_S14

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKPKPLHSIKVDGPIPAHLARSVIEETLRAAILDGRLPCGTAVRQQDLADLFGVSRMP
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
VREALRQLEAQGLLNVIAHKGAVVAPLIQGDATETYELRILLESEALRQSIPLLSPADHE
HHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCEEEEEEEECHHHHHHHCCCCCCCCHH
RAAGYIEELEIEHDYTEIGRLNRLFHMALYSKAPNGRLLRLVEDGLNEEERFLRFNLEAM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHCHHHH
GLGKLSQDDHRALLQAVKERDTPHAVTLLEQHLNRGVEVITRYLASSAGQSRKAAR
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TQKPKPLHSIKVDGPIPAHLARSVIEETLRAAILDGRLPCGTAVRQQDLADLFGVSRMP
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
VREALRQLEAQGLLNVIAHKGAVVAPLIQGDATETYELRILLESEALRQSIPLLSPADHE
HHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCEEEEEEEECHHHHHHHCCCCCCCCHH
RAAGYIEELEIEHDYTEIGRLNRLFHMALYSKAPNGRLLRLVEDGLNEEERFLRFNLEAM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHCHHHH
GLGKLSQDDHRALLQAVKERDTPHAVTLLEQHLNRGVEVITRYLASSAGQSRKAAR
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]