Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yqjD [C]

Identifier: 77456329

GI number: 77456329

Start: 104397

End: 104723

Strand: Direct

Name: yqjD [C]

Synonym: Pfl01_0101

Alternate gene names: 77456329

Gene position: 104397-104723 (Clockwise)

Preceding gene: 77456326

Following gene: 77456331

Centisome position: 1.62

GC content: 59.02

Gene sequence:

>327_bases
ATGGCCAACACCTCGTTACGCAAAGCCTCGTTGCAAAGCATGGAAGCGGAGATCGAGAGTCTGCTCAAGTCGTTGGAAAG
CCTGAAGGACGACGCTTCTGACGAGTCGCGCAAGACCCTCAAGGCGCTTAAAAGCAATGCCGAAAGTGCGCTGAAACATT
CGCGCAGCCTGCTCAGCGATGCCTACGAAGAAGTCAAAGTCAAAACCCGCGAGACCGGGATCGCCACCCGCGATTACGCG
CAGGAACACCCGTGGACGACTGCCGGTGTGGCGGTCGGTGCGCTGGGTCTGCTGGCCGCTTATCTGCTGTTCAAGCGCGG
CGAGTGA

Upstream 100 bases:

>100_bases
GGCGATCCGGGCGAGAGGAAGTTCAGATTTTCTGCACTTTCCAGAAACGCTGAAGTCCCAACCAACACACGCCACTCATC
ACCAATGCAGGAGAGCCACC

Downstream 100 bases:

>100_bases
TCCGCCTGGCGCAGCTCGTTTCTGAGCCACTGCGCCAATTGCCGGGCGCGTCCGTCTGCGGCGCGCTTGGGTAGCCACAA
CGCCAGTTGCGCCGAGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MANTSLRKASLQSMEAEIESLLKSLESLKDDASDESRKTLKALKSNAESALKHSRSLLSDAYEEVKVKTRETGIATRDYA
QEHPWTTAGVAVGALGLLAAYLLFKRGE

Sequences:

>Translated_108_residues
MANTSLRKASLQSMEAEIESLLKSLESLKDDASDESRKTLKALKSNAESALKHSRSLLSDAYEEVKVKTRETGIATRDYA
QEHPWTTAGVAVGALGLLAAYLLFKRGE
>Mature_107_residues
ANTSLRKASLQSMEAEIESLLKSLESLKDDASDESRKTLKALKSNAESALKHSRSLLSDAYEEVKVKTRETGIATRDYAQ
EHPWTTAGVAVGALGLLAAYLLFKRGE

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11798; Mature: 11667

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTSLRKASLQSMEAEIESLLKSLESLKDDASDESRKTLKALKSNAESALKHSRSLLSD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYEEVKVKTRETGIATRDYAQEHPWTTAGVAVGALGLLAAYLLFKRGE
HHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANTSLRKASLQSMEAEIESLLKSLESLKDDASDESRKTLKALKSNAESALKHSRSLLSD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYEEVKVKTRETGIATRDYAQEHPWTTAGVAVGALGLLAAYLLFKRGE
HHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA