| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456302
Identifier: 77456302
GI number: 77456302
Start: 78804
End: 79544
Strand: Reverse
Name: 77456302
Synonym: Pfl01_0074
Alternate gene names: NA
Gene position: 79544-78804 (Counterclockwise)
Preceding gene: 77456304
Following gene: 77456301
Centisome position: 1.24
GC content: 65.86
Gene sequence:
>741_bases ATGAAGCGCTTCCGGCCGGGTGTGGTGCCGACCCTGGTGGTCGGCCTGCTGCTGCCGTTGCTGATTTCGCTGGGCTTCTG GCAACTGGGCCGTGGCGCGGAGAAAACCGCCCTGCTCGCCAGCTACGCCGAACGCCGCGCCGCCGAACCGATGGCCAGCA CCGAGTTGCTGCACAGCGCCGATCCGGCCTTTCGCCGGGTGCATCTGCACGGCCAGTTTGACGCCGCCCACAGCCTGTTG CTGGACAACCGTCAGCGCAACGGCAAGGTCGGCGTCGAATTGCTGCAACCGTTTCAGGATCAGCGCAGCGGCCAGTGGCT GCTGGTCAATCGCGGCTGGCTGCCATGGCCGGACCGGCGCACGGCCCCGCAGTTCAACACACCGGTCGACGCCGTGGATG TCGATGCCTGGGTGTATGTCGCCCCCGGCGCCACCTTCCAGTTGCATGCCGATCCGGTCAGCAGCACCTGGCCGCAAACC GTCACCGCCGTCGAACCCACGAAGCTGTGGAAAACCCTCGAACGCGACGGTTTCGCCTACGAATTACGCGCCGAACCCGG CCCCGCCAGCTATCAGGCCGACTGGCCGGTGGTCGCGATGGGCCCGGAAAAACACCTCGGTTACGCCGTGCAGTGGTTCG CCATGGCCACCGCCCTGCTCGGTCTCTACCTTTATCTCGGCTGGCACAACGCAAAGGAGAAACACCATGGGAGCGGCCAT GAATCCACCCAGCATGTCTGA
Upstream 100 bases:
>100_bases GCATCAGGACGATGGCTGCTTTGAGCATGGGAAGAACTCCGGGGGAACTAGCGATGCAATTGAGTATAGCGATCGCACTC ACTGACTTTCTGGCGCGACC
Downstream 100 bases:
>100_bases AGCAAAAGCCCCGGCCAGTCGCCGTCGCGGACGCATCCAGCTGCTGCTGATCGTGCTCGGCGTGGTCGGTCCGATGATCC TCGCCACCGGCATGTACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKRFRPGVVPTLVVGLLLPLLISLGFWQLGRGAEKTALLASYAERRAAEPMASTELLHSADPAFRRVHLHGQFDAAHSLL LDNRQRNGKVGVELLQPFQDQRSGQWLLVNRGWLPWPDRRTAPQFNTPVDAVDVDAWVYVAPGATFQLHADPVSSTWPQT VTAVEPTKLWKTLERDGFAYELRAEPGPASYQADWPVVAMGPEKHLGYAVQWFAMATALLGLYLYLGWHNAKEKHHGSGH ESTQHV
Sequences:
>Translated_246_residues MKRFRPGVVPTLVVGLLLPLLISLGFWQLGRGAEKTALLASYAERRAAEPMASTELLHSADPAFRRVHLHGQFDAAHSLL LDNRQRNGKVGVELLQPFQDQRSGQWLLVNRGWLPWPDRRTAPQFNTPVDAVDVDAWVYVAPGATFQLHADPVSSTWPQT VTAVEPTKLWKTLERDGFAYELRAEPGPASYQADWPVVAMGPEKHLGYAVQWFAMATALLGLYLYLGWHNAKEKHHGSGH ESTQHV >Mature_246_residues MKRFRPGVVPTLVVGLLLPLLISLGFWQLGRGAEKTALLASYAERRAAEPMASTELLHSADPAFRRVHLHGQFDAAHSLL LDNRQRNGKVGVELLQPFQDQRSGQWLLVNRGWLPWPDRRTAPQFNTPVDAVDVDAWVYVAPGATFQLHADPVSSTWPQT VTAVEPTKLWKTLERDGFAYELRAEPGPASYQADWPVVAMGPEKHLGYAVQWFAMATALLGLYLYLGWHNAKEKHHGSGH ESTQHV
Specific function: Unknown
COG id: COG3346
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27499; Mature: 27499
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS50895 SURF1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFRPGVVPTLVVGLLLPLLISLGFWQLGRGAEKTALLASYAERRAAEPMASTELLHSA CCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC DPAFRRVHLHGQFDAAHSLLLDNRQRNGKVGVELLQPFQDQRSGQWLLVNRGWLPWPDRR CCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC TAPQFNTPVDAVDVDAWVYVAPGATFQLHADPVSSTWPQTVTAVEPTKLWKTLERDGFAY CCCCCCCCCCEEECCEEEEECCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHCCCEE ELRAEPGPASYQADWPVVAMGPEKHLGYAVQWFAMATALLGLYLYLGWHNAKEKHHGSGH EEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC ESTQHV CCCCCC >Mature Secondary Structure MKRFRPGVVPTLVVGLLLPLLISLGFWQLGRGAEKTALLASYAERRAAEPMASTELLHSA CCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC DPAFRRVHLHGQFDAAHSLLLDNRQRNGKVGVELLQPFQDQRSGQWLLVNRGWLPWPDRR CCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC TAPQFNTPVDAVDVDAWVYVAPGATFQLHADPVSSTWPQTVTAVEPTKLWKTLERDGFAY CCCCCCCCCCEEECCEEEEECCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHCCCEE ELRAEPGPASYQADWPVVAMGPEKHLGYAVQWFAMATALLGLYLYLGWHNAKEKHHGSGH EEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC ESTQHV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA