| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yjbB [H]
Identifier: 77456262
GI number: 77456262
Start: 36849
End: 38507
Strand: Direct
Name: yjbB [H]
Synonym: Pfl01_0034
Alternate gene names: 77456262
Gene position: 36849-38507 (Clockwise)
Preceding gene: 77456261
Following gene: 77456263
Centisome position: 0.57
GC content: 63.53
Gene sequence:
>1659_bases ATGCTCACCCTGCTCAATTTGCTGTCTGCCGTGGCCCTGCTGATCTGGGGCACGCACATCGTTCGTACCGGCATCCTGCG GGTGTACGGCACCAATCTGCGCCACGTGATCGGCCAGAACATGTCCAGGCGCTGGCTGGCCTTTGTCGCCGGCATCGTTG TCACTGCGATGGTGCAGAGCAGCAACGCCACCGCCATGCTCGTGACGTCCTTTGTCGGTCAGGGCCTGATGGCGTTGACC CCGGCCCTGGCGACCATGCTCGGTGCCGATGTCGGTACGGCGCTGATGGCGCGGGTGCTGACGTTCGACCTGTCGTGGCT GTCGCCGCTGCTGATTTTTATCGGGGTGATTTTCTTTCTGTCGCGCAAACAGACCCGGCTCGGGCAGATGGGCCGCGTGT CCATTGGGCTTGGGCTGATCATTCTGGCGCTGCAATTGATCGTCGAGGCCGCTGCGCCGATCACCCATGCCCAAGGGGTG AAGGTGATTTTCGCGTCGCTGACTGGCGATATCCTGCTCGACGCTCTGGTGGGCGCGCTGTTCGCGATGATTTCCTACTC CAGTCTGGCGGCCGTGCTGCTGACCGCCACGCTCGCCGGCGCTGCGGTGATCAGTCTGCCGGTGGCGATCGGTCTGGTGA TTGGTGCCAACATCGGCAGCGGCGTGCTGGCGTTCATGAGCACCAGCATGCAGAACGCCGCCGGCCGGCAGGTGGCGCTG GGCAGCCTGCTGTACAAACTGATCGGGCTGCTGCTGATCATTCCGGTGCTCGACCCGCTGGTGCACTGGATCGACAGCCT GGATTTCAGCCCCCAGGAAATGGTCATCGGCTTCCATCTGCTCTACAACACCGCGCGCTGCCTGATCCTGCTCCCGAGCG TCGGCCCGATGGCGCGGCTGTGTGCCTGGCTGCTGCCGGAGCGCCCCGAGGTCAATGGCACCGCCAAGCCCCGTCACCTT GATCCCACCGCGCTGGTCACGCCGAGTCTGGCGCTGGCCAACGCCGCCCGGGAAACCCTGCGCATGGGCGACCTGATCGA CAACATGCTCGACGCGACCCTCGACGTGCTGCGCGGCAAGCAGACCGCCGTCACCCAGGAAATGCGCAAGCTGACCGATG ATGTCGAAGCGCTGTACAGCGCGATCAAGCTGTACCTGGCGCAGATGCCCCGCGAGGATCTCGGCGAACAGGACAGTCGG CGCTGGGCGGAAATTATCGAGCTGGCGATCAACCTTAAACTCGCCAGCGACCTGATCGAACGCATGCTGCGCAAGGTGCA GCAGCAGAAGACTTCGCAACGCCGGTCGTTTTCCGAAGACGGGCTGGAAGAATTGGCCGGCCTGCACCAGCAATTGATCG CCAACCTGCGGCTCGGGCTGTCGGTGTTCCTCAGCGGCGACAAGGAGAGCGCCCGCCAGTTGCTGCGCGAGAAACGGCGC TTTCGCGCACAGGAACGACGTCTGGCCCACGCCCATGTCAGCCGGTTGCAACGCAAGATCGTGCAGAGTATCGAGACCAG TTCGTTGCACCTGGAGTTGATTGCCGACATGAAACGCCTGAACTCGCTGTTCTGCAGCAGCGCCTATGTGGTGCTGGAAA CTTCCGATACCGGCGCGCTGGCGGCGGACGATATGGCGGACATCACGCATTCGCCTTGA
Upstream 100 bases:
>100_bases CCCAGACCGTTAGCCAACTACAGCTTAAGTATCAGAACGTAGAAATTGCGCGGTACCGTCAACTTGCCCCTCTGGGGCGC TGCCATTACAGGGGGTCTGC
Downstream 100 bases:
>100_bases ACGTCTGGGGTTGCGGTCAGTCAGTAACTCAAGGTTTGGCCTCGCGGCCGGACTGACGACACGGATCTCCAATTCAGCCG TATGGAAGCTCGTTATGCGT
Product: Na/Pi cotransporter II-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MLTLLNLLSAVALLIWGTHIVRTGILRVYGTNLRHVIGQNMSRRWLAFVAGIVVTAMVQSSNATAMLVTSFVGQGLMALT PALATMLGADVGTALMARVLTFDLSWLSPLLIFIGVIFFLSRKQTRLGQMGRVSIGLGLIILALQLIVEAAAPITHAQGV KVIFASLTGDILLDALVGALFAMISYSSLAAVLLTATLAGAAVISLPVAIGLVIGANIGSGVLAFMSTSMQNAAGRQVAL GSLLYKLIGLLLIIPVLDPLVHWIDSLDFSPQEMVIGFHLLYNTARCLILLPSVGPMARLCAWLLPERPEVNGTAKPRHL DPTALVTPSLALANAARETLRMGDLIDNMLDATLDVLRGKQTAVTQEMRKLTDDVEALYSAIKLYLAQMPREDLGEQDSR RWAEIIELAINLKLASDLIERMLRKVQQQKTSQRRSFSEDGLEELAGLHQQLIANLRLGLSVFLSGDKESARQLLREKRR FRAQERRLAHAHVSRLQRKIVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETSDTGALAADDMADITHSP
Sequences:
>Translated_552_residues MLTLLNLLSAVALLIWGTHIVRTGILRVYGTNLRHVIGQNMSRRWLAFVAGIVVTAMVQSSNATAMLVTSFVGQGLMALT PALATMLGADVGTALMARVLTFDLSWLSPLLIFIGVIFFLSRKQTRLGQMGRVSIGLGLIILALQLIVEAAAPITHAQGV KVIFASLTGDILLDALVGALFAMISYSSLAAVLLTATLAGAAVISLPVAIGLVIGANIGSGVLAFMSTSMQNAAGRQVAL GSLLYKLIGLLLIIPVLDPLVHWIDSLDFSPQEMVIGFHLLYNTARCLILLPSVGPMARLCAWLLPERPEVNGTAKPRHL DPTALVTPSLALANAARETLRMGDLIDNMLDATLDVLRGKQTAVTQEMRKLTDDVEALYSAIKLYLAQMPREDLGEQDSR RWAEIIELAINLKLASDLIERMLRKVQQQKTSQRRSFSEDGLEELAGLHQQLIANLRLGLSVFLSGDKESARQLLREKRR FRAQERRLAHAHVSRLQRKIVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETSDTGALAADDMADITHSP >Mature_552_residues MLTLLNLLSAVALLIWGTHIVRTGILRVYGTNLRHVIGQNMSRRWLAFVAGIVVTAMVQSSNATAMLVTSFVGQGLMALT PALATMLGADVGTALMARVLTFDLSWLSPLLIFIGVIFFLSRKQTRLGQMGRVSIGLGLIILALQLIVEAAAPITHAQGV KVIFASLTGDILLDALVGALFAMISYSSLAAVLLTATLAGAAVISLPVAIGLVIGANIGSGVLAFMSTSMQNAAGRQVAL GSLLYKLIGLLLIIPVLDPLVHWIDSLDFSPQEMVIGFHLLYNTARCLILLPSVGPMARLCAWLLPERPEVNGTAKPRHL DPTALVTPSLALANAARETLRMGDLIDNMLDATLDVLRGKQTAVTQEMRKLTDDVEALYSAIKLYLAQMPREDLGEQDSR RWAEIIELAINLKLASDLIERMLRKVQQQKTSQRRSFSEDGLEELAGLHQQLIANLRLGLSVFLSGDKESARQLLREKRR FRAQERRLAHAHVSRLQRKIVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETSDTGALAADDMADITHSP
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=536, Percent_Identity=63.0597014925373, Blast_Score=645, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59997; Mature: 59997
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLLNLLSAVALLIWGTHIVRTGILRVYGTNLRHVIGQNMSRRWLAFVAGIVVTAMVQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHC SNATAMLVTSFVGQGLMALTPALATMLGADVGTALMARVLTFDLSWLSPLLIFIGVIFFL CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKQTRLGQMGRVSIGLGLIILALQLIVEAAAPITHAQGVKVIFASLTGDILLDALVGAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHH FAMISYSSLAAVLLTATLAGAAVISLPVAIGLVIGANIGSGVLAFMSTSMQNAAGRQVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH GSLLYKLIGLLLIIPVLDPLVHWIDSLDFSPQEMVIGFHLLYNTARCLILLPSVGPMARL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHH CAWLLPERPEVNGTAKPRHLDPTALVTPSLALANAARETLRMGDLIDNMLDATLDVLRGK HHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QTAVTQEMRKLTDDVEALYSAIKLYLAQMPREDLGEQDSRRWAEIIELAINLKLASDLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RMLRKVQQQKTSQRRSFSEDGLEELAGLHQQLIANLRLGLSVFLSGDKESARQLLREKRR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHH FRAQERRLAHAHVSRLQRKIVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETSDTGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC AADDMADITHSP CCCHHHHCCCCC >Mature Secondary Structure MLTLLNLLSAVALLIWGTHIVRTGILRVYGTNLRHVIGQNMSRRWLAFVAGIVVTAMVQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHC SNATAMLVTSFVGQGLMALTPALATMLGADVGTALMARVLTFDLSWLSPLLIFIGVIFFL CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKQTRLGQMGRVSIGLGLIILALQLIVEAAAPITHAQGVKVIFASLTGDILLDALVGAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHH FAMISYSSLAAVLLTATLAGAAVISLPVAIGLVIGANIGSGVLAFMSTSMQNAAGRQVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH GSLLYKLIGLLLIIPVLDPLVHWIDSLDFSPQEMVIGFHLLYNTARCLILLPSVGPMARL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHH CAWLLPERPEVNGTAKPRHLDPTALVTPSLALANAARETLRMGDLIDNMLDATLDVLRGK HHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QTAVTQEMRKLTDDVEALYSAIKLYLAQMPREDLGEQDSRRWAEIIELAINLKLASDLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RMLRKVQQQKTSQRRSFSEDGLEELAGLHQQLIANLRLGLSVFLSGDKESARQLLREKRR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHH FRAQERRLAHAHVSRLQRKIVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETSDTGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC AADDMADITHSP CCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]