| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456256
Identifier: 77456256
GI number: 77456256
Start: 31102
End: 31761
Strand: Reverse
Name: 77456256
Synonym: Pfl01_0028
Alternate gene names: NA
Gene position: 31761-31102 (Counterclockwise)
Preceding gene: 77456258
Following gene: 77456254
Centisome position: 0.49
GC content: 63.48
Gene sequence:
>660_bases ATGAAAAATGCCGAAACCCCGGCGGTGAAAGTGGTGCTCTATGGTGCCATGAGTAGCCTGGGCAGTGCGTTGATGGCTGA ACTGCTGCGTCGCCAGCACGAAGTCATTGCCATCCTCGACGATCTGACGGCGCTCGCCCCACGGCCGGGGCTGCGCACCA AAAGCGGCGATCTGCTCGATGCCGAGCGGGTCAACCAGAGTGTCGCCGGCAGCTCGGCAGTGATCTGCCTGCTCAATGCG CCGGGCTTGCCGCTGAGCAGCGATCATGTCGAGAAATCCGTGGTGTTGGGGCCTGTGGAACAGGTGCTGGCGGTGGATGC GCTGATCGACGGACTGCAGGCGGCGAACGTCTCGCGGCTGTTTGTCATCGGCGAATTCGAAGCCCTGGACGATCCGGAAA ACGCCGACCCGTTGCAACGCCACGCCGCTCAAGAGGTTCGCGAAGCCCTGCAAAGCAGCCCGCTGCACTGGACGCTGGTG AATGCACCGCGCAGCGTGGCCGGGCTGACGATCGAGCATTTCAGTCAGGTCGGCCGCACGCTTGAACCGGGTCTGGCCGA ACCGCTGGAGCGCCTGAACCGGGTGGCGGTGGGCATTGCCGATGAGCTGCGGCTGAATTTGCATCTGCGCCAGCACGTGG ATTTTGTCGCCGCTTCTTGA
Upstream 100 bases:
>100_bases CCTTGATCGTCTGCATCGCAAACCCTCTGAATCGGTTCGAACCCTCGCCGTTGACCGTATGTCACACGCCATACAAGGGA AAACAAAAGGGAACTCAGCC
Downstream 100 bases:
>100_bases TCCGTTACACAGCAATCGACGGCAACGGTAGCCCGGCCAGGGATTCGGCGCTGCTCGCCTGTTCGGCCATCAGCCAATCC ACGAACGTCTGGATCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLDAERVNQSVAGSSAVICLLNA PGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRLFVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLV NAPRSVAGLTIEHFSQVGRTLEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS
Sequences:
>Translated_219_residues MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLDAERVNQSVAGSSAVICLLNA PGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRLFVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLV NAPRSVAGLTIEHFSQVGRTLEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS >Mature_219_residues MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLDAERVNQSVAGSSAVICLLNA PGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRLFVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLV NAPRSVAGLTIEHFSQVGRTLEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23442; Mature: 23442
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AERVNQSVAGSSAVICLLNAPGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRL HHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE FVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLVNAPRSVAGLTIEHFSQVGRT EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCC LEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AERVNQSVAGSSAVICLLNAPGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRL HHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE FVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLVNAPRSVAGLTIEHFSQVGRT EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCC LEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA