| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is imm [H]
Identifier: 255961283
GI number: 255961283
Start: 6114787
End: 6115062
Strand: Direct
Name: imm [H]
Synonym: Pfl01_5448
Alternate gene names: 255961283
Gene position: 6114787-6115062 (Clockwise)
Preceding gene: 77461666
Following gene: 77461672
Centisome position: 94.97
GC content: 46.01
Gene sequence:
>276_bases ATGAAATTAAAAGACAAAATCGAAGATTATACCGAAACTGAATTTCTGCTTTTCGTAACGGAGTTTTTCGAGAATACAAA CAGCCTGACCGGCGACGCACTAAGCGCATACACAAGTAATCTCGCACTTCATTTTGAGAAAATAACCGAGCACCCGAGAA AGCGCGCGGTAATTTTCCGACCGACACCCGACCGTGAGGACAGTGCCGCTGGAGTAGTAGAAGAAATCAAAAAATGGCGC CAGGCAAACGGCAAGCCCGGATTCAAGGCTGAATAA
Upstream 100 bases:
>100_bases TACATCACATCAAAGATGGTGGCGAAGTTTACAATATTGACAACTTAACCATAATCACCCCTCGCGCACATATAGAACTA CACAAGAATGGTATAGAACC
Downstream 100 bases:
>100_bases TTCATAAATCAGACAGTGTCACACCTACAGCGACACTGTCTGGCTTTTTACTAAAGCAATTCGCGAATATCCTCCGGCAA CAAATTCACATACCGACTAT
Product: colicin/pyocin immunity family protein
Products: NA
Alternate protein names: ImmE7; Microcin-E7 immunity protein [H]
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MKLKDKIEDYTETEFLLFVTEFFENTNSLTGDALSAYTSNLALHFEKITEHPRKRAVIFRPTPDREDSAAGVVEEIKKWR QANGKPGFKAE
Sequences:
>Translated_91_residues MKLKDKIEDYTETEFLLFVTEFFENTNSLTGDALSAYTSNLALHFEKITEHPRKRAVIFRPTPDREDSAAGVVEEIKKWR QANGKPGFKAE >Mature_91_residues MKLKDKIEDYTETEFLLFVTEFFENTNSLTGDALSAYTSNLALHFEKITEHPRKRAVIFRPTPDREDSAAGVVEEIKKWR QANGKPGFKAE
Specific function: This protein is able to protect a cell, which harbors the plasmid ColE7 encoding colicin E7, against colicin E7, it binds specifically to the DNase-type colicin and inhibits its bactericidal activity. Dimeric ImmE7 may possess a RNase activity that cleave
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the colicins ColE2/ColE8/ColE9 and pyocins S1/S2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000290 - ProDom: PD007225 [H]
Pfam domain/function: PF01320 Colicin_Pyocin [H]
EC number: NA
Molecular weight: Translated: 10465; Mature: 10465
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKDKIEDYTETEFLLFVTEFFENTNSLTGDALSAYTSNLALHFEKITEHPRKRAVIFR CCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCEEEEC PTPDREDSAAGVVEEIKKWRQANGKPGFKAE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKLKDKIEDYTETEFLLFVTEFFENTNSLTGDALSAYTSNLALHFEKITEHPRKRAVIFR CCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCEEEEC PTPDREDSAAGVVEEIKKWRQANGKPGFKAE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2045785; 8692833; 9135159; 10368275 [H]