| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 255961276
Identifier: 255961276
GI number: 255961276
Start: 1742354
End: 1744240
Strand: Reverse
Name: 255961276
Synonym: Pfl01_1555
Alternate gene names: NA
Gene position: 1744240-1742354 (Counterclockwise)
Preceding gene: 77457783
Following gene: 255961277
Centisome position: 27.09
GC content: 53.15
Gene sequence:
>1887_bases ATGAACACCAGTACGAACGCAGTTCCGACCGTCAGACAGGTAGCAATCATGGGAGTGCCTGAAGTAGGAGGAACACTGAC CGGCAGCTATATATATGAAAACCCTGATGAGAATCCCGAAGGGTTATCTACTTTCTGTTGGTATGACGGTGGAACCAGCG GAAAAATTATTGCAACTTCAATCGACCTGACCTTGGTTGCTACACATGCAGGAATGAAACTTACGTTTTCGGTGACCCCC ATTGCTGCATCGGGAGAAAAAGGCGTGGAATCGTTTTCTGACCCCCTTCAAGTGATAAAAGAGGGATTTCAGAATATCTC GGATGAAGAAAGTGAAAACAGCTTTCTGAAACAAAGAGGTCAGTTCGCTTTTCATGCGAACGGTCCAAAGGACGGAGTAT TCACCTCGACCGCAGGAGCATTTGCCCTGAAGAGCAGAGTCACACAAAACGTCGCTGTTGTAGGCACGCAAAGTTTTGGT GGCGTAGTCCCTCCAGAGATAGCGACATACTTGAGAAACAACCCCGCTATAACAATGTTCACCACCACAACAAATTTTGG TGCCCTGGTCCCCATAGGTGAACACAATCAGTTGCTCGTCTGGGGACCCGGGATACCGGCGACGTTACCCAACCTTCAAG ACATCAAGTCGGTCTACAGCAACGACTCCTCGCTAGCATTTATATATAAGGATCCACCCTCCGGCGAAAACACTATCGGC GCCGTCGGAACGGCAGCAACAGGCGGTGTCGTGCCGGTCGAAGTGCAAAACAAACTGATGTTTGATCGCCCGAAAGCCAT CTACGCCACCCTCGATGCTTTCACTGTGCTGACAGACAGCGGACGCGTATATGCCTGGGGTAATGCGGCGAATGGCGGAA CAATTCCGATCGATGTACAGACTCAATTGAATTCTATGAAAGTCGATCGCATTGTTGCTTCCCGAACTGCATTTTGTGCC CTGACGGAATCCGGAGAAATCATTGCGTGGGGCGCTAACGGCGCTATTCCCGCTGTGACTCTGGAGAAGATATATGACGA TGACGGAGCGCTCACGGTCATTGCCAATGACAGCGCATTCATCGCCATAACGAGAGGCCGCAGAAAAGCCGCTACATGGG GGTTGGCGGCACACGGCGGAACTATGTCAGAGGCGGCCGCCAGTCTTGCTGCCCGAGGAAACCTCACGCTTTGCACGGCT GCGCCTTGGGCGATGTGCTTCATCAATGAAAGCGGACAAGCCGCTGCCTGGGGATCGGCTGGCCATGGTGGCGGGACCAT CCCTGCCCAAAGCGCCGGTGAAGAAACCTCGACTTTGCCCTTGAATGCTCAGGCGTTATTGGAGCAAGGCGATATCGCAG CGCAGATCGAGACCATGTTCAGCAATGCCAGATTCTCAAAAAGCCTACAACGCCGCGTGTCTTCCAGTGTCACCCTGACC AACGGCGAAGCAATCGAACTAACGCGCAACGATGGCAGCTTTGTCTTGCTCAACCGCCATCCCGATGGCCGCACAAAAAA TCTGGTTTCTTGGGGTTTAGCTGCGACGGGAGGCACGATACCCGGTGATATCAAGCAAACACTGATGGCCAGTCGCATTC GAAAAATCTACTGCAGCAATGGCGCTTACGCAGCTCTGGTTGACCAAGGCACAACCGAAGGTGTGGTCGTCACCTGGGGA CGAGCCTCACAGGATGGCGGGATGATTCCGGCCGCTCTTCGAGACGCATTGAGTAGCGGTGTTGTCGAAATATATACCAT CCAGGCAGCTCCAGCACCTTCGACCGCGACGGTTCCAGCCGCCTTCGCGGCACGCAAATCGAACAACAAATATGTGACGT GGGGTGCCCACGTCAAACAAGAAGAGTTTGAGCCAGGACGCAGTTGA
Upstream 100 bases:
>100_bases TCAACTGCTATCGGCAGGCCCCAATGCGCCCGATCTTGCGGCCTTGTCGGGCCTGGTCTCATACAGCGAATAAGTTTTTT TCGTGAAGGGAGTTACCAAC
Downstream 100 bases:
>100_bases GCTTGTTCAACCGACAGACTATTTGTACGTTGAGGAGTATTGCTATGAGTACTACAGCCGAACCAATTGCGCGGAATGTC ATGATCATTGGAGAGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATSIDLTLVATHAGMKLTFSVTP IAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRGQFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFG GVVPPEIATYLRNNPAITMFTTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQTQLNSMKVDRIVASRTAFCA LTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAFIAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTA APWAMCFINESGQAAAWGSAGHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSNGAYAALVDQGTTEGVVVTWG RASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPAAFAARKSNNKYVTWGAHVKQEEFEPGRS
Sequences:
>Translated_628_residues MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATSIDLTLVATHAGMKLTFSVTP IAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRGQFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFG GVVPPEIATYLRNNPAITMFTTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQTQLNSMKVDRIVASRTAFCA LTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAFIAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTA APWAMCFINESGQAAAWGSAGHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSNGAYAALVDQGTTEGVVVTWG RASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPAAFAARKSNNKYVTWGAHVKQEEFEPGRS >Mature_628_residues MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATSIDLTLVATHAGMKLTFSVTP IAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRGQFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFG GVVPPEIATYLRNNPAITMFTTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQTQLNSMKVDRIVASRTAFCA LTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAFIAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTA APWAMCFINESGQAAAWGSAGHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSNGAYAALVDQGTTEGVVVTWG RASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPAAFAARKSNNKYVTWGAHVKQEEFEPGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65732; Mature: 65732
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATS CCCCCCCCCCEEEEEEEECCCCCCEEECCEEECCCCCCCCCCEEEEEECCCCCCCEEEEE IDLTLVATHAGMKLTFSVTPIAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRG EEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC QFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFGGVVPPEIATYLRNNPAITMF CEEEECCCCCCCEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEE TTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG EEECCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEE AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQ ECCCCCCCCEEEEEECCCEEECCCCEEEEEEEEEEEEECCCCEEEECCCCCCCEEEEEEE TQLNSMKVDRIVASRTAFCALTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAF CCCCCEEHHHHHHCCEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEEEECCCEE IAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTAAPWAMCFINESGQAAAWGSA EEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCEEECCCC GHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSN CCCEEEEEECCCCEEEEECCCCCCCCCHHEECEEECCCCCCHHHHHHHHHHHHHEEEECC GAYAALVDQGTTEGVVVTWGRASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPA CCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCH AFAARKSNNKYVTWGAHVKQEEFEPGRS HHHHHCCCCCEEEECCCCCHHCCCCCCC >Mature Secondary Structure MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATS CCCCCCCCCCEEEEEEEECCCCCCEEECCEEECCCCCCCCCCEEEEEECCCCCCCEEEEE IDLTLVATHAGMKLTFSVTPIAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRG EEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC QFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFGGVVPPEIATYLRNNPAITMF CEEEECCCCCCCEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEE TTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG EEECCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEE AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQ ECCCCCCCCEEEEEECCCEEECCCCEEEEEEEEEEEEECCCCEEEECCCCCCCEEEEEEE TQLNSMKVDRIVASRTAFCALTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAF CCCCCEEHHHHHHCCEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEEEECCCEE IAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTAAPWAMCFINESGQAAAWGSA EEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCEEECCCC GHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSN CCCEEEEEECCCCEEEEECCCCCCCCCHHEECEEECCCCCCHHHHHHHHHHHHHEEEECC GAYAALVDQGTTEGVVVTWGRASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPA CCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCH AFAARKSNNKYVTWGAHVKQEEFEPGRS HHHHHCCCCCEEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA