| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454628
Identifier: 77454628
GI number: 77454628
Start: 64891
End: 65790
Strand: Direct
Name: 77454628
Synonym: pREL1_0061
Alternate gene names: NA
Gene position: 64891-65790 (Clockwise)
Preceding gene: 77454626
Following gene: 77454629
Centisome position: 23.89
GC content: 64.22
Gene sequence:
>900_bases ATGGCCGAATCGAATGTGGAGTCGGGAAATACTGCCGACGGTGCTTCGACTTCTCTCTCCGCTGAGGAAGTCGAGTCCAC AACGCCTGGCCGTGGTCAACGACCGGGGCTTGTCACCGCCGCCGACGCAGGAAGGCGGAAACCCCCTCTCTCGACGTATC TGCCGATCCTGGGTGTCATTGCTGTGAGTGTGGCGGTGTGGATCGCTGCTCGCTGGGCGTTCGGTCGTCACGAGCAGGCT GGCCTGTGGTCGGTCGCGTCGTTCGCCGCTCTGGCTGGGGCGGCGGTGAGCGTGGCGGTGCGTCCGATGATGGCAGGTTT GTGTGCACTCGTGCAGATTCCCGTGACGCCGACCAGTCGCCCGATGGTCCCAGCAGTGGCAACAGCAGGATTGTGGTTCG GGGCGGTGATGATCGCCGGCGGCGACGCGATCTTGCCGGCATGGCTCACGGTGGCGGCTTTGTCCGTTTGGGCCGCGTGG ATCGACCACTTCACCTTGCGGTTCCCCTTGCCGCTGATTCGTGCAGTCACCGCGGCGGGTCTGCTGCTCGGCGCGATGGC AGTGGTGGTCGATCAGGACCCTGCCGCGGGTCTTCGTGCTGTGGTGGCCGGGGCCGCGATATTCGCCAGTTACCTGGTGT TCGCGATCATTACTCGCGGTCACCCCGGTTTGGCGGATGTGAGGTTGAGCTTCATTCTCACTGCAGCTGTCGGATGGGTC GGTTGGATGAACGTGGCTTCGGCAGTGCTGCTGCCGAATATTCTGGCGGTAGTAGGGGTGGCGGTAACCAAGGTGTTCGG AGGCAGAAAGGTCCGGGGTGTGGAGTTCGGGTTCGCTCCGTACCTCGTTGTCGGAACCGCGCTCGCTGTCGCGTTGCCTG CGGGCTGGTGGCTGCTGTGA
Upstream 100 bases:
>100_bases CAAACGATGAGTTCGGAAGCCCGCGCTGTCCGGTAGAGCGGTTAGGGTCGGGTTCTGCCTGTGACCACGGGTGATGGACG CGCTGAAGGAGCTTTCCGAG
Downstream 100 bases:
>100_bases ACCCGAGCAAACGTATCCGTACCGATGAGAGGAACTGGACATGAGGTGGCGCCGCCGGCGGAATCGTTTCCAATCACCGA ACCGGGTGGAACTGGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAESNVESGNTADGASTSLSAEEVESTTPGRGQRPGLVTAADAGRRKPPLSTYLPILGVIAVSVAVWIAARWAFGRHEQA GLWSVASFAALAGAAVSVAVRPMMAGLCALVQIPVTPTSRPMVPAVATAGLWFGAVMIAGGDAILPAWLTVAALSVWAAW IDHFTLRFPLPLIRAVTAAGLLLGAMAVVVDQDPAAGLRAVVAGAAIFASYLVFAIITRGHPGLADVRLSFILTAAVGWV GWMNVASAVLLPNILAVVGVAVTKVFGGRKVRGVEFGFAPYLVVGTALAVALPAGWWLL
Sequences:
>Translated_299_residues MAESNVESGNTADGASTSLSAEEVESTTPGRGQRPGLVTAADAGRRKPPLSTYLPILGVIAVSVAVWIAARWAFGRHEQA GLWSVASFAALAGAAVSVAVRPMMAGLCALVQIPVTPTSRPMVPAVATAGLWFGAVMIAGGDAILPAWLTVAALSVWAAW IDHFTLRFPLPLIRAVTAAGLLLGAMAVVVDQDPAAGLRAVVAGAAIFASYLVFAIITRGHPGLADVRLSFILTAAVGWV GWMNVASAVLLPNILAVVGVAVTKVFGGRKVRGVEFGFAPYLVVGTALAVALPAGWWLL >Mature_298_residues AESNVESGNTADGASTSLSAEEVESTTPGRGQRPGLVTAADAGRRKPPLSTYLPILGVIAVSVAVWIAARWAFGRHEQAG LWSVASFAALAGAAVSVAVRPMMAGLCALVQIPVTPTSRPMVPAVATAGLWFGAVMIAGGDAILPAWLTVAALSVWAAWI DHFTLRFPLPLIRAVTAAGLLLGAMAVVVDQDPAAGLRAVVAGAAIFASYLVFAIITRGHPGLADVRLSFILTAAVGWVG WMNVASAVLLPNILAVVGVAVTKVFGGRKVRGVEFGFAPYLVVGTALAVALPAGWWLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30664; Mature: 30533
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESNVESGNTADGASTSLSAEEVESTTPGRGQRPGLVTAADAGRRKPPLSTYLPILGVI CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHH AVSVAVWIAARWAFGRHEQAGLWSVASFAALAGAAVSVAVRPMMAGLCALVQIPVTPTSR HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PMVPAVATAGLWFGAVMIAGGDAILPAWLTVAALSVWAAWIDHFTLRFPLPLIRAVTAAG CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LLLGAMAVVVDQDPAAGLRAVVAGAAIFASYLVFAIITRGHPGLADVRLSFILTAAVGWV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GWMNVASAVLLPNILAVVGVAVTKVFGGRKVRGVEFGFAPYLVVGTALAVALPAGWWLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHCC >Mature Secondary Structure AESNVESGNTADGASTSLSAEEVESTTPGRGQRPGLVTAADAGRRKPPLSTYLPILGVI CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHH AVSVAVWIAARWAFGRHEQAGLWSVASFAALAGAAVSVAVRPMMAGLCALVQIPVTPTSR HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PMVPAVATAGLWFGAVMIAGGDAILPAWLTVAALSVWAAWIDHFTLRFPLPLIRAVTAAG CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LLLGAMAVVVDQDPAAGLRAVVAGAAIFASYLVFAIITRGHPGLADVRLSFILTAAVGWV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GWMNVASAVLLPNILAVVGVAVTKVFGGRKVRGVEFGFAPYLVVGTALAVALPAGWWLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA