| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454580
Identifier: 77454580
GI number: 77454580
Start: 17455
End: 18213
Strand: Direct
Name: 77454580
Synonym: pREL1_0013
Alternate gene names: NA
Gene position: 17455-18213 (Clockwise)
Preceding gene: 77454571
Following gene: 77454585
Centisome position: 6.43
GC content: 59.55
Gene sequence:
>759_bases GTGGATATGACTTGGGTGCAAGATTCGCGGGTCTTGGGTGAGGTGTCTCGTCGCACCCGAGCTGTCCAGGGAGGGCTGTA TAACTCTCAGCAAGATCACTTTAGGTTTGAGCGAGCGCGTCTCGTTCCCTGTTCAGTATCGGAGATTGACGTGACTAGCA CGCATAACCAAGGCCCGTCTCAGTCGGCTGGAGGGCACCGACCACTCGCCGGGACCTTCCGTTCGGCCGCGGCCCGATCG CTCGAGAGCATCGCTTCCGCGTACATCGAGGGTGACAACGACGAAATTGAACAAGGGCGGGAAGTGCCCGCGCATGTGGA GCGCCCCGCTGAGGCTGAACCTTCTGGAGGTCAACAAGATCGGGAGCAAGTCGACCGTTCCTCGGACCTGGATGGGGGAG GGAAGTCGTCAAGTGTTCGGGTGCCGGCAAGGTGCCATGCGAAGCTCGAGGAGATGCGGGCGAGCACGGGGATGACGAAC GGTCAGATCTTCATCGTCGCGATCGAGGCGACTCATGATCGACTTCCGGAACTGCTCTACCCTGGCGGTCGAATCGGTGG GGGATTATTCGCAGCCCGGGGCATTCGAGCCAAAACGTCACGTGACGATAGTGAGACGCAGGTGACTTACCGACTATTTC ATGCCGACTTCGACGTGATCGATCACCTCGTGGCGGAACTGGGCGCAAAATCCCGCTCGCACCTGATCGCTGCGGCGCTG ACCGGATATTTCTTCAAAGACGACGAACCCGCAACATGA
Upstream 100 bases:
>100_bases TTCTGTGATGAAATCGAGCTTGCCACTTCCGCATATGTAGGCAATTAGGTGCTTACGTCTTGGTCGTATCGAAATGATCC GATAGGTTTCTCTAACGGCT
Downstream 100 bases:
>100_bases CGAGGGAAGCGACGAGGGCGCCTTCAGCGCTTCCTGTTTGCGAGTAACCAAAGGGAAAGAACAAGCACGGGGGAGAGGGC GACAGGGACCGCAAGTACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MDMTWVQDSRVLGEVSRRTRAVQGGLYNSQQDHFRFERARLVPCSVSEIDVTSTHNQGPSQSAGGHRPLAGTFRSAAARS LESIASAYIEGDNDEIEQGREVPAHVERPAEAEPSGGQQDREQVDRSSDLDGGGKSSSVRVPARCHAKLEEMRASTGMTN GQIFIVAIEATHDRLPELLYPGGRIGGGLFAARGIRAKTSRDDSETQVTYRLFHADFDVIDHLVAELGAKSRSHLIAAAL TGYFFKDDEPAT
Sequences:
>Translated_252_residues MDMTWVQDSRVLGEVSRRTRAVQGGLYNSQQDHFRFERARLVPCSVSEIDVTSTHNQGPSQSAGGHRPLAGTFRSAAARS LESIASAYIEGDNDEIEQGREVPAHVERPAEAEPSGGQQDREQVDRSSDLDGGGKSSSVRVPARCHAKLEEMRASTGMTN GQIFIVAIEATHDRLPELLYPGGRIGGGLFAARGIRAKTSRDDSETQVTYRLFHADFDVIDHLVAELGAKSRSHLIAAAL TGYFFKDDEPAT >Mature_252_residues MDMTWVQDSRVLGEVSRRTRAVQGGLYNSQQDHFRFERARLVPCSVSEIDVTSTHNQGPSQSAGGHRPLAGTFRSAAARS LESIASAYIEGDNDEIEQGREVPAHVERPAEAEPSGGQQDREQVDRSSDLDGGGKSSSVRVPARCHAKLEEMRASTGMTN GQIFIVAIEATHDRLPELLYPGGRIGGGLFAARGIRAKTSRDDSETQVTYRLFHADFDVIDHLVAELGAKSRSHLIAAAL TGYFFKDDEPAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27437; Mature: 27437
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMTWVQDSRVLGEVSRRTRAVQGGLYNSQQDHFRFERARLVPCSVSEIDVTSTHNQGPS CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCCCC QSAGGHRPLAGTFRSAAARSLESIASAYIEGDNDEIEQGREVPAHVERPAEAEPSGGQQD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCCCCCCCCCCHHH REQVDRSSDLDGGGKSSSVRVPARCHAKLEEMRASTGMTNGQIFIVAIEATHDRLPELLY HHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCHHHHC PGGRIGGGLFAARGIRAKTSRDDSETQVTYRLFHADFDVIDHLVAELGAKSRSHLIAAAL CCCCCCCHHHHHCCCCCCCCCCCCHHEEEEHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH TGYFFKDDEPAT HHHHCCCCCCCC >Mature Secondary Structure MDMTWVQDSRVLGEVSRRTRAVQGGLYNSQQDHFRFERARLVPCSVSEIDVTSTHNQGPS CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCCCC QSAGGHRPLAGTFRSAAARSLESIASAYIEGDNDEIEQGREVPAHVERPAEAEPSGGQQD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCCCCCCCCCCHHH REQVDRSSDLDGGGKSSSVRVPARCHAKLEEMRASTGMTNGQIFIVAIEATHDRLPELLY HHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCHHHHC PGGRIGGGLFAARGIRAKTSRDDSETQVTYRLFHADFDVIDHLVAELGAKSRSHLIAAAL CCCCCCCHHHHHCCCCCCCCCCCCHHEEEEHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH TGYFFKDDEPAT HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA