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The map label for this gene is ykgF [H]

Identifier: 76819800

GI number: 76819800

Start: 2288100

End: 2289548

Strand: Direct

Name: ykgF [H]

Synonym: BURPS1710b_A1874

Alternate gene names: 76819800

Gene position: 2288100-2289548 (Clockwise)

Preceding gene: 76817883

Following gene: 76818004

Centisome position: 71.91

GC content: 69.22

Gene sequence:

>1449_bases
ATGAGCGCGACACCCTTGAATGCGCCGGCGACGTTCAAGGCGCGCGCGAGCGCCGCGCTGCACGACGCGCAGCTTCAGGA
AGCGCTCGGCATGCTCGGCGAGGGCTGGATCGAGAAGCGGCGGCGCGTCGTGTCGCTCTTGCCCGAGTTCGAGATGCTGC
GCGAGCGCGCGAAGGCCGTGAAGGACCACGTGCTCGCGAACCTCGACACGTATCTCGAACGCTATGAAGCGGCCGTCACG
CGCGCGGGCGGCGTCGTCCACTGGGCGAACGACGCGGCCGACGCGCGCGAGATCGTGCTGAGGATCTGCCGCGACGCAAA
CGCGAAGACCATCACGCGCGGCAAGTCGATGGTCGGCGAGGAGATCGGGCTGCCCGCCGCGCTCGAGGGCGCGGGCATGG
AAGTCGTCGAGACCGATCTCGGCGAATACATCGTGCAGCTCGCGCACGAAGGGCCGAGCCACATCGTGTTCCCGGCGCTG
CACAAGACGATCGGTCAGGTAACCGAACTGTTCGCCGGGAACCATTCGAGCGCGCAGTACGACGGGCCGCGCGAAACCGT
TGCGGACGTCGTCGGCGAGGCGCGCCAGGTGTTGCGCGAGAAGTTCTTCGTCGCGGACGTGGGCATCACCGGCGCGAACT
ACCTCGTTGCCGAAACGGGGTCGAACGTGATCTGCACGAACGAGGGCAACGGCGATCTGACGTCGACGCTCGCGCGCGTG
CACATCGTCACGGCGGGCATCGAACGCGTCGTGCCGACGCTCGACGACGTCGCGCTGTTCGTGCGCCTGCTCGGCCGCAG
CGCGACGGGGCAGGAGATCACGTCGTACACGACGTTCAGCACGGGCCCGAGGCGCGGCGACGATCTCGACGGCCCGCAGG
AATACCACGTGGTGCTCGTCGACAACGGCCGCACGCGGATGCTCGCCGGCGAATTCCGCGACATGCTGCGCTGCATCCGC
TGCGGCGCGTGCATGAACCATTGCCCGGTGTACGGCGCGGTCGGCGGCCATGCATACGGCTGGGTCTATCCGGGGCCGAT
GGGCGCCGTTCTCACGCCGCTGATGCAGGGCATCGAGCACGATACCGATCTGCCGAACGCGTGCACGCTGAACGGGCGCT
GCGCGCAGGTGTGCCCGGTGAAGATTCCGCTGCCGACGCTGCTCAAGAAGCTGCGCGGGATGCAGTTCGACGCGCGGCTC
ACCGCGCCCGGCACGCGTTTCTTGTTGCGCGCGTTCGGCGCGATCGCGCGGCGGCCGGCGCTCTATCACTGGCTCACGCG
CGTCGGCGCGCGCGCGCTGCGCGCGCTCGGCGGCAAGCGCGGCAGCATCGCGCGCGTGCCGTTCGCCTCCGGCTGGACCG
ATTCGCGCGAATTGCCGAAACCGCCGCCGCGCACGTTCTTCGAGACGTGGGACGCGACGCGCACGAATCAACCGGAGGTG
CGTCGATGA

Upstream 100 bases:

>100_bases
TCGGCGGGCGGCTCAAGCGCGAGGGCAGCGCGGTGCGCGTCTATCACGTCGCCGAAGTGCTGGCGGGCATGAACGTCGAG
CCGATCTGCGGGGAGGGCGA

Downstream 100 bases:

>100_bases
GCGCGCGCGACGACATTCTCGGCCGTATCCGCGCGGCGCTCGGCAGCGAGCGCGCGCGGCTTGCCGCGCAGTTTCCGGCG
CCGGCGCAAGCGAAGGGCGC

Product: iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MSATPLNAPATFKARASAALHDAQLQEALGMLGEGWIEKRRRVVSLLPEFEMLRERAKAVKDHVLANLDTYLERYEAAVT
RAGGVVHWANDAADAREIVLRICRDANAKTITRGKSMVGEEIGLPAALEGAGMEVVETDLGEYIVQLAHEGPSHIVFPAL
HKTIGQVTELFAGNHSSAQYDGPRETVADVVGEARQVLREKFFVADVGITGANYLVAETGSNVICTNEGNGDLTSTLARV
HIVTAGIERVVPTLDDVALFVRLLGRSATGQEITSYTTFSTGPRRGDDLDGPQEYHVVLVDNGRTRMLAGEFRDMLRCIR
CGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLMQGIEHDTDLPNACTLNGRCAQVCPVKIPLPTLLKKLRGMQFDARL
TAPGTRFLLRAFGAIARRPALYHWLTRVGARALRALGGKRGSIARVPFASGWTDSRELPKPPPRTFFETWDATRTNQPEV
RR

Sequences:

>Translated_482_residues
MSATPLNAPATFKARASAALHDAQLQEALGMLGEGWIEKRRRVVSLLPEFEMLRERAKAVKDHVLANLDTYLERYEAAVT
RAGGVVHWANDAADAREIVLRICRDANAKTITRGKSMVGEEIGLPAALEGAGMEVVETDLGEYIVQLAHEGPSHIVFPAL
HKTIGQVTELFAGNHSSAQYDGPRETVADVVGEARQVLREKFFVADVGITGANYLVAETGSNVICTNEGNGDLTSTLARV
HIVTAGIERVVPTLDDVALFVRLLGRSATGQEITSYTTFSTGPRRGDDLDGPQEYHVVLVDNGRTRMLAGEFRDMLRCIR
CGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLMQGIEHDTDLPNACTLNGRCAQVCPVKIPLPTLLKKLRGMQFDARL
TAPGTRFLLRAFGAIARRPALYHWLTRVGARALRALGGKRGSIARVPFASGWTDSRELPKPPPRTFFETWDATRTNQPEV
RR
>Mature_481_residues
SATPLNAPATFKARASAALHDAQLQEALGMLGEGWIEKRRRVVSLLPEFEMLRERAKAVKDHVLANLDTYLERYEAAVTR
AGGVVHWANDAADAREIVLRICRDANAKTITRGKSMVGEEIGLPAALEGAGMEVVETDLGEYIVQLAHEGPSHIVFPALH
KTIGQVTELFAGNHSSAQYDGPRETVADVVGEARQVLREKFFVADVGITGANYLVAETGSNVICTNEGNGDLTSTLARVH
IVTAGIERVVPTLDDVALFVRLLGRSATGQEITSYTTFSTGPRRGDDLDGPQEYHVVLVDNGRTRMLAGEFRDMLRCIRC
GACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLMQGIEHDTDLPNACTLNGRCAQVCPVKIPLPTLLKKLRGMQFDARLT
APGTRFLLRAFGAIARRPALYHWLTRVGARALRALGGKRGSIARVPFASGWTDSRELPKPPPRTFFETWDATRTNQPEVR
R

Specific function: Unknown

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=459, Percent_Identity=41.3943355119826, Blast_Score=376, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52513; Mature: 52382

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATPLNAPATFKARASAALHDAQLQEALGMLGEGWIEKRRRVVSLLPEFEMLRERAKAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KDHVLANLDTYLERYEAAVTRAGGVVHWANDAADAREIVLRICRDANAKTITRGKSMVGE
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EIGLPAALEGAGMEVVETDLGEYIVQLAHEGPSHIVFPALHKTIGQVTELFAGNHSSAQY
HCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC
DGPRETVADVVGEARQVLREKFFVADVGITGANYLVAETGSNVICTNEGNGDLTSTLARV
CCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHH
HIVTAGIERVVPTLDDVALFVRLLGRSATGQEITSYTTFSTGPRRGDDLDGPQEYHVVLV
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCCCCCCCCCEEEEEE
DNGRTRMLAGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLMQGIEH
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCC
DTDLPNACTLNGRCAQVCPVKIPLPTLLKKLRGMQFDARLTAPGTRFLLRAFGAIARRPA
CCCCCCCEECCCCCCEECCEECCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCHH
LYHWLTRVGARALRALGGKRGSIARVPFASGWTDSRELPKPPPRTFFETWDATRTNQPEV
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
RR
CC
>Mature Secondary Structure 
SATPLNAPATFKARASAALHDAQLQEALGMLGEGWIEKRRRVVSLLPEFEMLRERAKAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KDHVLANLDTYLERYEAAVTRAGGVVHWANDAADAREIVLRICRDANAKTITRGKSMVGE
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EIGLPAALEGAGMEVVETDLGEYIVQLAHEGPSHIVFPALHKTIGQVTELFAGNHSSAQY
HCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC
DGPRETVADVVGEARQVLREKFFVADVGITGANYLVAETGSNVICTNEGNGDLTSTLARV
CCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHH
HIVTAGIERVVPTLDDVALFVRLLGRSATGQEITSYTTFSTGPRRGDDLDGPQEYHVVLV
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCCCCCCCCCEEEEEE
DNGRTRMLAGEFRDMLRCIRCGACMNHCPVYGAVGGHAYGWVYPGPMGAVLTPLMQGIEH
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCC
DTDLPNACTLNGRCAQVCPVKIPLPTLLKKLRGMQFDARLTAPGTRFLLRAFGAIARRPA
CCCCCCCEECCCCCCEECCEECCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCHH
LYHWLTRVGARALRALGGKRGSIARVPFASGWTDSRELPKPPPRTFFETWDATRTNQPEV
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]