| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819601
Identifier: 76819601
GI number: 76819601
Start: 1113827
End: 1114576
Strand: Direct
Name: 76819601
Synonym: BURPS1710b_A0852
Alternate gene names: NA
Gene position: 1113827-1114576 (Clockwise)
Preceding gene: 76817447
Following gene: 76817740
Centisome position: 35.01
GC content: 62.13
Gene sequence:
>750_bases ATGAATAAGAGAAAAGTGATTCCGAGTCTGCGCTCGCTCGCAGATCAAGAACGCGCGACGGCGAAGAAGGCCCGCGCTTC GTGGCAGATGTTCACGATTATGGCAGAGTTTATCGAGGCGACCGAGTACCTGTCCGAGATCCGCCCTGCCGTCAGCATCT ATGGTTCCGCGCGTCTGAAGCCGGATTCGCCGCACTACAAGCTCACCGTGCAGATCGCGCGCAAGCTGTCCGACGCGGGC TTCGCCGTGATCTCGGGCGGCGGCCCCGGCATCATGGAAGCGGCGAACAAGGGCGCGCACGCCGGCAAGGCGCCGTCCGT CGGCCTGAACATCGAGCTGCCGCATGAGCAGGCGGGCAACCACTTCCAGGACATCTCGCTGCGCTTTCGCCATTTCTTCA CGCGCAAGGTCACGTTCGTGAAGAATTCGGACGCGGTGATCGTGATGCCGGGCGGCTTCGGCACGCTCGACGAGCTGTCC GAAGTGCTCACGCTGATCCAGACGAAGAAATCGCGTCTCGTGCCGATCGTGCTCGTCGGCAGCGCGTTCTGGAGCGGCCT GCTGCAGTGGTTCCGCGACCAGATGATTCCGATGGGCCTCATCAATCCGGACGACATGAACCTGATGAAGGTGATCGACG ATCCGGACCAGGTGCTCGAAGCGGTGCTCGCGTTCTACGAGGATCGCGGCGAGGAAACCGAGGAATCGCACCCGCCGCGC CCCGAAGAGGATCGGATGTTCTATCTGTGA
Upstream 100 bases:
>100_bases GCCGCGCAAATCAGGCATCGCATGGTAAGCCCGATACAGATAGCTCGAACCGTCAACCAATAGCAGGGTCTTACCTTCCA GATTTCGTTCTTCAGGCATT
Downstream 100 bases:
>100_bases CGGCGCGCGCCGCGGCTGCGGCGCGCCTCGCGCATCCCCGGACGGGCGGAGCCGACGAGGCGTCCGCCCGTTTTTCGTCG CGTGCGTCGCGCGCGGCCGA
Product: decarboxylase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNKRKVIPSLRSLADQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLKPDSPHYKLTVQIARKLSDAG FAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGNHFQDISLRFRHFFTRKVTFVKNSDAVIVMPGGFGTLDELS EVLTLIQTKKSRLVPIVLVGSAFWSGLLQWFRDQMIPMGLINPDDMNLMKVIDDPDQVLEAVLAFYEDRGEETEESHPPR PEEDRMFYL
Sequences:
>Translated_249_residues MNKRKVIPSLRSLADQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLKPDSPHYKLTVQIARKLSDAG FAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGNHFQDISLRFRHFFTRKVTFVKNSDAVIVMPGGFGTLDELS EVLTLIQTKKSRLVPIVLVGSAFWSGLLQWFRDQMIPMGLINPDDMNLMKVIDDPDQVLEAVLAFYEDRGEETEESHPPR PEEDRMFYL >Mature_249_residues MNKRKVIPSLRSLADQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLKPDSPHYKLTVQIARKLSDAG FAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGNHFQDISLRFRHFFTRKVTFVKNSDAVIVMPGGFGTLDELS EVLTLIQTKKSRLVPIVLVGSAFWSGLLQWFRDQMIPMGLINPDDMNLMKVIDDPDQVLEAVLAFYEDRGEETEESHPPR PEEDRMFYL
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27833; Mature: 27833
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRKVIPSLRSLADQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDSPHYKLTVQIARKLSDAGFAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGN CCCCCEEEHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEECCHHHHCC HFQDISLRFRHFFTRKVTFVKNSDAVIVMPGGFGTLDELSEVLTLIQTKKSRLVPIVLVG HHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEH SAFWSGLLQWFRDQMIPMGLINPDDMNLMKVIDDPDQVLEAVLAFYEDRGEETEESHPPR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC PEEDRMFYL CCCCCEECC >Mature Secondary Structure MNKRKVIPSLRSLADQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDSPHYKLTVQIARKLSDAGFAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGN CCCCCEEEHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEECCHHHHCC HFQDISLRFRHFFTRKVTFVKNSDAVIVMPGGFGTLDELSEVLTLIQTKKSRLVPIVLVG HHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEH SAFWSGLLQWFRDQMIPMGLINPDDMNLMKVIDDPDQVLEAVLAFYEDRGEETEESHPPR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC PEEDRMFYL CCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA