| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819511
Identifier: 76819511
GI number: 76819511
Start: 1103227
End: 1104690
Strand: Direct
Name: 76819511
Synonym: BURPS1710b_A0846
Alternate gene names: NA
Gene position: 1103227-1104690 (Clockwise)
Preceding gene: 76819137
Following gene: 76817655
Centisome position: 34.67
GC content: 64.07
Gene sequence:
>1464_bases ATGCTGAAGACGCCCATGCCCACGCAGCACGAACTCGAGATGGTGACGCTCGAGGAACTCGTGCCGAAGGACCACCTGCT GCGCCAGATCGATGCGGCGGTGGATTTCGAGTTCATCCGCGCGAAGGTGGCGCATCTGTATTGCGCGGACAACGGGCGGC CGGCGCTCGATCCCGTGGTGATGTTCAAGCTGTTGCTCATCGGCTACCTGTTCGGGGTGCGCAGCGAGCGGCAACTGATG CGTGAGGTCCAGGTCAACGTCGCCTATCGCTGGTTCGCCCGGTTCCGGCTGACCGACAAGGTGCCGGATGCGTCAACGTT CTCGCAGAATCGCCGCCGACGCTTCACGGACACGACGGTGTATCAGGAGATCTTCGACGAGATCGTGCGGCAGGCGATCA AGCGCGGGCTGGTCGACGGTCGGGTGCTGTACACGGACAGCACGCACCTGAAGGCGAACGCGAACAAGGGCAAGTTCGAT GTGGTGAAGCTGGAGCAGACGCCGGCGGCCTACACGGAGGCATTGAACGCGGCAGTGGATGCGGACCGGGCCACGCATGG CAGGAAGCCGCTGGATCGCGACGACGATGAGCCGCCGTCGAGCAAGGACACCAAGATCAGCCGGACCGATCCGGACAGCG GCTACATGGTGCGGGACGACAAGCCGAAGGGGTTCTTCTATCTGGACCACCGCACGGTGGATGCCAAGCACGCGATCATC ACCGATACGCATGTGACGCCGGCCTCGGTGCATGACAGCCAGCCGTATCTGGATCGGCTGGATCGCCAGCGTGAGCGCTT TGAGTTCAAGGTCGAGGCGGTGGGGCTGGATGCGGGCTACTTCACGCCGGCGGTGTGCCAGGGGCTGGAGGAGCGAGGGA TTGCCGGGGTGATGGGCTATCGCACGCCGAACCACAAGCCGGGCATGTTCTACAAACGGCAGTTCAAGTACGACGCGTAT CGCAACGAATACGTGTGCCCGCAGGGGCAGGCCCTGCCGTACAGCACGACCAATCGGCTCGGCTATCGGGAATACAAATC CAATGCGCAGATCTGCGGGCGCTGCCCGGTACGATCGCAGTGCACGAACAGTGCGATCGCGGTGAAGGTGGTAACGCGCC ACGTGTGGGAGCGCGCCAAGGAGCGGGTGGACGCGCGGCGCTTGACCGAATGGGGCCAACGCATTTACGCGCGGCGCAAG CAGACGGTGGAGCGCAGCTTCGCCGATGCCAAGCAGCTGCATGGGCACCGTTATGCCCGTATGCGTGGGCTACGCAAGGT GGCCGAGCAGTGCTTGCTGGCCGCGGCGGCACAGAACATCAAGAAGATTGCGATGCTGCTGGCGCGGAAGCGGAAAAAGG GGCCAGCGGGTCCCGATTGGCGCTTCGTGCGCATGCTGCTGCGTCTGGTGAGCGGTTTGCGCTGCAGCTTCGACTACCCG CTCGCGGCGAACCCGCAATCCTGA
Upstream 100 bases:
>100_bases CGGACTTGCGCCGGGCCGACACGGAAAAGACGGGCTGCAGCCCGTCCAGATTGCTGACAAACCCTCGCCAAGTGCGGGGT TTTTGTTTTTTAATGGCGTG
Downstream 100 bases:
>100_bases TCCCAGAAAGACAAAACCCCACGCTCACAAAAACGTGGGGTTCGTCAGCAGTCTGGACGGGCTGCAGCCCGTCTTTTTTT GTTTAGACTTAGAGCATCTG
Product: ISBma2, transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; Transposase Is4 Family Protein; ISPsy6 Transposase; Transposase IS4 Family; ISPsy22 Transposase Truncated; ISCps6 Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase And Inactivated Derivative; IS5 Family Transposase; Transposase-Related Protein; ISMca1 Transposase; Transposase Mutator Type; IS5 Family Transposase N-Terminal Domain; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; ISGsu2 Transposase; Transposase ; Transposase Fragment IS5 Family; IS4 Transposase; Transposase For IS; Transposase For Insertion Sequence NGRIS-8b; ISPpu20 Transposase; ISSag8 Transposase
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLLIGYLFGVRSERQLM REVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFD VVKLEQTPAAYTEALNAAVDADRATHGRKPLDRDDDEPPSSKDTKISRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAII TDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAY RNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRK QTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYP LAANPQS
Sequences:
>Translated_487_residues MLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLLIGYLFGVRSERQLM REVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFD VVKLEQTPAAYTEALNAAVDADRATHGRKPLDRDDDEPPSSKDTKISRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAII TDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAY RNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRK QTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYP LAANPQS >Mature_487_residues MLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLLIGYLFGVRSERQLM REVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFD VVKLEQTPAAYTEALNAAVDADRATHGRKPLDRDDDEPPSSKDTKISRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAII TDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAY RNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRK QTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYP LAANPQS
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56039; Mature: 56039
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVV CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH MFKLLLIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCHHHHH YQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVD HHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHC ADRATHGRKPLDRDDDEPPSSKDTKISRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAII CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEECCCCEEE TDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGY ECCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCCEEEECC RTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQ CCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCHH CTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYAR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCCC LAANPQS CCCCCCC >Mature Secondary Structure MLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVV CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH MFKLLLIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCHHHHH YQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVD HHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHC ADRATHGRKPLDRDDDEPPSSKDTKISRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAII CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEECCCCEEE TDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGY ECCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCCEEEECC RTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQ CCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCHH CTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYAR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCCC LAANPQS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA