| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is plcN [H]
Identifier: 76819491
GI number: 76819491
Start: 1917409
End: 1919658
Strand: Direct
Name: plcN [H]
Synonym: BURPS1710b_A1577
Alternate gene names: 76819491
Gene position: 1917409-1919658 (Clockwise)
Preceding gene: 76818659
Following gene: 76818369
Centisome position: 60.26
GC content: 67.42
Gene sequence:
>2250_bases ATGCGCGCATCGCCGGTTCATCGCTCGGTCAACCCATACCAAGGACTCCGGAACATGAACGCTCGTCGCAGATTTCTGCA AGGCACCGCAACCACCGGCATCGCGGCCGCCACGTTGGCCGCGTTTCCGCTCAGCATTCGCCGCGCACTCGCGATTCCCG CCAACAACCGCACCGGAACCATCCGGGATGTCGAGCACATCGTCATCCTGATGCAGGAAAACCGCTCGTTCGACAACTAC TTCGGCACGCTGCGCGGCGTGCGCGGCTTTGGCGACCGCTTCGGCATTCCGCTGCCGAACGCGCTGACGGTCTGGCAGCA GCGCAACGCGACGGGCGCGCTGGTGCTGCCCTATCACCTGGACGGCAGCAAGGGCAACGCACAGCGCGTCAGCGGCACGC CGCACTCGTGGGACGACGGCCAGAACGCGTGGGACGGCGGGCGCATGTATCAGTGGCCGCGCTACAAGAACACGGCGTCG ATGGGCTACTTCCGGGAGAGCGAGCTGCCGTTCCAGTTCGCGCTCGCGAACGCGTTCACGATCTGCGATGCGTACCACTG CTCGATGCACGCGGGCACCAACTCCAACCGGATGTTCATGTGGACCGGCACCAACGGCCCGACCGGCGCGGGCGTGGCCT CGGTGGTGAACGAATGGGACGACATCGGCCCCTCCACGTTCGGCTATGAGTGGAAGACCTATCCCGAGCGCTTGCAGGAA GCCGGCGTGAGCTGGAAGGTCTACCAGAACATGCCGGACAACTTCACCGACAACGCGCTTGCCGGCTTCAGGCAGTACCG CCGCGCGAACGAGGCGTCGGGCAAGCCGGTGAGCAACAGCGACAAGGTGGTTTCGCCCGCATACGATCCGGCGAGCGACG ACGTTCGCAACCCGCTGTACAAGGGCATCGCCAACACGATGCCCGACGGCGGCTTCCTCGGCGCCTTCAAGGAAGACATC CGTGCGGGCAAGCTGCCGCAGGTGTCGTGGGTGGTGGCGCCGGCCGCGTATTCCGAGCATCCGGGGCCGTCGAGCCCGGT GCAGGGCGCGTGGTACATCCAGGAGGTGCTCGATGCGCTCACCGCGACGCCGGACGTCTGGAGCAAGACCGTGCTGCTCG TGAATTTCGACGAGAACGACGGCTACTTCGACCACGTGCCTTCGCCGTCGGCGCCGTCGCTGAATCCGGACGGCTCGCCG GCCGGCAAGACCACGCTGCCCGAGGCCGACATCGCGTTCGAGCGCTTCACCCATCCGAAGCCGCCGGGCACCAAGAGCCA GCCGCAGCCCGACGCCCGCGTATATGGCCCCGGCGTGCGCGTGCCGATGTACGTGATCTCGCCGTGGAGCCGCGGCGGCT GGGTCAACTCGCAGGTGTTCGATCACACGTCGACGCTGCGTTTCATCGAGGCGCGCTTCGGTGTGCGCGAGCCCAATATC TCCGCGTTCCGCCGCGCGGTGTGCGGCGATCTGACGAGCGCGTTCAACTTCGTGCGACCGAACAACGAGCCGCTGCCCAC GCTGGCGGGGCGCAAGACCCGAGCTCAGGCCGATGCGCTGCGCGCCGCGCAGCAGCAGATGCCGCAGATCGTGCCGCCTG CGAACGGCCTATTGCCGCGCCAGGAGACAGGCACGCGGCCGTCGCGCGCGTTGCCGTACGAACTGCATGTCAACGCGGTC GCGCGCACGCTCGACGGCACGCTGCGCCTCGTATTCGCCAACACGGGGCAGGCCGCGGCCGTGTTCCACGTCTACGACAA GCTGAATCTGGGCCGCCTGCCGCGCCGATACATGGTCGAGGCCGGCAAGCAGCTCGACGACGTCTGGGCCGCGATGACGG ACAACGGCGGCAAGTACGACCTGTGGGTGCTCGGGCCCAACGGCTTGCACCGCCATTTCACCGGCGATATGAACCGCCTG CGCGCGGGCGGCGCGCCCGTGCCCGAAGTGCGGGTGGAGTACGACCGCCAGCACGGCAACGTGCAATTGCTGTTGCGTAA CGAAGGGGCGCGCGAGTGCGTGTTCACCGTGCGCGCGAAGGCGTACCGCGACGATGGTCCGTGGACCTTCAAGGTCAAGG GCGGCGCCGAGCGCAAGCATCACTGGAAGCTGGACGGCAGCGGCAATTGGTACGACTTCGTCGTGACCTGCGACGCCGAC ACCGGTTACTCGCGCCGCTTCGCCGGCCGGGTGGAAACCGGCGAGCACTCCGTCAGCGATCCGGCGATGGGGTTCGGCGA TCGGTTCTGA
Upstream 100 bases:
>100_bases GACGTCACGCTGAAACCTTACATTCGGCTTGGGAATTCCCAAGCCGAGGAGGGGGCTCGATGTGCAACGCCGCCGCAGCC GTCGCCGTGCGCGCCGGCGC
Downstream 100 bases:
>100_bases GCGGGGCGAGCCGCCGCGGCCGCGGTCGGTCGCGGCGGGACGATGTGGAGATGGAGGGGACGAAAGAGGAGAACAAAGGC CTGACGCGCACGACAATGGC
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MRASPVHRSVNPYQGLRNMNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGTIRDVEHIVILMQENRSFDNY FGTLRGVRGFGDRFGIPLPNALTVWQQRNATGALVLPYHLDGSKGNAQRVSGTPHSWDDGQNAWDGGRMYQWPRYKNTAS MGYFRESELPFQFALANAFTICDAYHCSMHAGTNSNRMFMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQE AGVSWKVYQNMPDNFTDNALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLYKGIANTMPDGGFLGAFKEDI RAGKLPQVSWVVAPAAYSEHPGPSSPVQGAWYIQEVLDALTATPDVWSKTVLLVNFDENDGYFDHVPSPSAPSLNPDGSP AGKTTLPEADIAFERFTHPKPPGTKSQPQPDARVYGPGVRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNI SAFRRAVCGDLTSAFNFVRPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPRQETGTRPSRALPYELHVNAV ARTLDGTLRLVFANTGQAAAVFHVYDKLNLGRLPRRYMVEAGKQLDDVWAAMTDNGGKYDLWVLGPNGLHRHFTGDMNRL RAGGAPVPEVRVEYDRQHGNVQLLLRNEGARECVFTVRAKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDAD TGYSRRFAGRVETGEHSVSDPAMGFGDRF
Sequences:
>Translated_749_residues MRASPVHRSVNPYQGLRNMNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGTIRDVEHIVILMQENRSFDNY FGTLRGVRGFGDRFGIPLPNALTVWQQRNATGALVLPYHLDGSKGNAQRVSGTPHSWDDGQNAWDGGRMYQWPRYKNTAS MGYFRESELPFQFALANAFTICDAYHCSMHAGTNSNRMFMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQE AGVSWKVYQNMPDNFTDNALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLYKGIANTMPDGGFLGAFKEDI RAGKLPQVSWVVAPAAYSEHPGPSSPVQGAWYIQEVLDALTATPDVWSKTVLLVNFDENDGYFDHVPSPSAPSLNPDGSP AGKTTLPEADIAFERFTHPKPPGTKSQPQPDARVYGPGVRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNI SAFRRAVCGDLTSAFNFVRPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPRQETGTRPSRALPYELHVNAV ARTLDGTLRLVFANTGQAAAVFHVYDKLNLGRLPRRYMVEAGKQLDDVWAAMTDNGGKYDLWVLGPNGLHRHFTGDMNRL RAGGAPVPEVRVEYDRQHGNVQLLLRNEGARECVFTVRAKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDAD TGYSRRFAGRVETGEHSVSDPAMGFGDRF >Mature_749_residues MRASPVHRSVNPYQGLRNMNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGTIRDVEHIVILMQENRSFDNY FGTLRGVRGFGDRFGIPLPNALTVWQQRNATGALVLPYHLDGSKGNAQRVSGTPHSWDDGQNAWDGGRMYQWPRYKNTAS MGYFRESELPFQFALANAFTICDAYHCSMHAGTNSNRMFMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQE AGVSWKVYQNMPDNFTDNALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLYKGIANTMPDGGFLGAFKEDI RAGKLPQVSWVVAPAAYSEHPGPSSPVQGAWYIQEVLDALTATPDVWSKTVLLVNFDENDGYFDHVPSPSAPSLNPDGSP AGKTTLPEADIAFERFTHPKPPGTKSQPQPDARVYGPGVRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNI SAFRRAVCGDLTSAFNFVRPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPRQETGTRPSRALPYELHVNAV ARTLDGTLRLVFANTGQAAAVFHVYDKLNLGRLPRRYMVEAGKQLDDVWAAMTDNGGKYDLWVLGPNGLHRHFTGDMNRL RAGGAPVPEVRVEYDRQHGNVQLLLRNEGARECVFTVRAKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDAD TGYSRRFAGRVETGEHSVSDPAMGFGDRF
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 82888; Mature: 82888
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASPVHRSVNPYQGLRNMNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGT CCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCC IRDVEHIVILMQENRSFDNYFGTLRGVRGFGDRFGIPLPNALTVWQQRNATGALVLPYHL CEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEE DGSKGNAQRVSGTPHSWDDGQNAWDGGRMYQWPRYKNTASMGYFRESELPFQFALANAFT CCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCEEEHHHHHHH ICDAYHCSMHAGTNSNRMFMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQE HHHHHEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AGVSWKVYQNMPDNFTDNALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLY CCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHH KGIANTMPDGGFLGAFKEDIRAGKLPQVSWVVAPAAYSEHPGPSSPVQGAWYIQEVLDAL HHHHHCCCCCCEEHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH TATPDVWSKTVLLVNFDENDGYFDHVPSPSAPSLNPDGSPAGKTTLPEADIAFERFTHPK HCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC PPGTKSQPQPDARVYGPGVRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNI CCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCH SAFRRAVCGDLTSAFNFVRPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC QETGTRPSRALPYELHVNAVARTLDGTLRLVFANTGQAAAVFHVYDKLNLGRLPRRYMVE CCCCCCCCCCCCEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEEEHHCCCCCCCHHHHHH AGKQLDDVWAAMTDNGGKYDLWVLGPNGLHRHFTGDMNRLRAGGAPVPEVRVEYDRQHGN HCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCC VQLLLRNEGARECVFTVRAKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDAD EEEEEECCCCCEEEEEEEHHEECCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEEECCC TGYSRRFAGRVETGEHSVSDPAMGFGDRF CCCCHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRASPVHRSVNPYQGLRNMNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGT CCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCC IRDVEHIVILMQENRSFDNYFGTLRGVRGFGDRFGIPLPNALTVWQQRNATGALVLPYHL CEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEE DGSKGNAQRVSGTPHSWDDGQNAWDGGRMYQWPRYKNTASMGYFRESELPFQFALANAFT CCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCEEEHHHHHHH ICDAYHCSMHAGTNSNRMFMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQE HHHHHEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AGVSWKVYQNMPDNFTDNALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLY CCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHH KGIANTMPDGGFLGAFKEDIRAGKLPQVSWVVAPAAYSEHPGPSSPVQGAWYIQEVLDAL HHHHHCCCCCCEEHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH TATPDVWSKTVLLVNFDENDGYFDHVPSPSAPSLNPDGSPAGKTTLPEADIAFERFTHPK HCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC PPGTKSQPQPDARVYGPGVRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNI CCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCH SAFRRAVCGDLTSAFNFVRPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC QETGTRPSRALPYELHVNAVARTLDGTLRLVFANTGQAAAVFHVYDKLNLGRLPRRYMVE CCCCCCCCCCCCEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEEEHHCCCCCCCHHHHHH AGKQLDDVWAAMTDNGGKYDLWVLGPNGLHRHFTGDMNRLRAGGAPVPEVRVEYDRQHGN HCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCC VQLLLRNEGARECVFTVRAKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDAD EEEEEECCCCCEEEEEEEHHEECCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEEECCC TGYSRRFAGRVETGEHSVSDPAMGFGDRF CCCCHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]