| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819472
Identifier: 76819472
GI number: 76819472
Start: 948111
End: 950531
Strand: Direct
Name: 76819472
Synonym: BURPS1710b_A0712
Alternate gene names: NA
Gene position: 948111-950531 (Clockwise)
Preceding gene: 76818025
Following gene: 76818809
Centisome position: 29.8
GC content: 66.91
Gene sequence:
>2421_bases ATGCATTTCTTTCGATTCGCGTGGCGGCACGGCCGATATTGGCTTTGCCTGCTGATTGCGAGCGTATTGCTGCCGCAAGG CGCGGCGGCGGCCGTCACGGCGTCCTACACGGACATCGTCGGCGCGGACAGCGGGCTGTGCGTCTCGACGGCCGGCAACT CGAGCGCATCGGGCGCGGGCGTCGTGCAGACCTCGTGCGCGGGCCTGAGCAACACGACATGGTCGTTCGTTCCCGTCGGC AACCGCTATCACATCGTGCTGCAAGGCAGCGGCCTGTGCCTGAACGTGCCCGGGGGCTCGCTGAACAGCGGCACGCAATT GATCCAGTACGCATGTCAGGGCAACGGCCAGACCAATGACCAATGGACGGTCGTCGCGGTCGGCTCGAGCTACCGGATCG TGTCCGCGTCGAGCGGCATGTGCGTGAACGTGAGCGGCGCATCGCACGCGAGCGGCGCGGCGCTGATCCAGTATCCGTGC CAGGGCGCGGGCGCGCTCAACGATCAATTCAATCTGTATCTGCCCGTCGTCGCGGCCACCAACGTCACGGCGGCGAACAG CAACCTCTGCGTGAGCGTCAATGGCGGATCGACGGCCGCCGGCGCATCGATCGTCCAGGGAACATGCTCGAATCAGGGCG CCACGGGCTGGTCGCTGCTGCCCGCCGGCAGCGGCTATCACGTCGTCTCGCAAGGCACCGGGCAATGCCTGAACGTATAT GGCGGATACACGACGAGCGGCGCGCCGATCATCCAGTATCCGTGCCAGGGCGACGCGCAGACGAACGATCAATGGACGCT CGTGCCCGTCGGCTCGAAGTACCGGCTGATTTCGGTGTCGAGCGGCATGTGCCTGAACGTGAGCGGCGGCTCGCTGTCGC CGGGCGCGCCGCTGATCCAGTACCCGTGCCAGGGCGCGAACGCGCTCAACGACCAGTTCTCGCTCAGCCTGCCGCAGACT TTCCCGGTCACGCTGCCGTCCGCATGGAGCCCCGTGATTCCGCTGCCCGTCAATCCGATCGGCATCGCGAACGCGCCGAA CGGCAAGCTCGTGATGTGGTCCGCTGATCAGCAATTGAGCTTCCAGAACGACGTCGGCAGCAAGGCGACGCAGACGCAGA CCGCGGTGTTCGACCCGGCGACGAACACCGCGACGCAGTATCTCGAAACCTCGGCGGGCTCGGACATGTTCTGCACCGGC ACCGCGATGCTGCCCGACGGCCGCCTGCTCGTGAACGGCGGCGACAGCAGCCCGAAGACGACGCTGTACGACTGGACGAC CAATACGTGGAGCGCCGCGGCGACGATGAACATTGCGCGCGGCTATCAGGGCGACACGCTGCTGTCGAACGGCTCGGTGC TCACGCTCGGCGGCTCGTGGAGCGGCGGTCAGGGCGGCAAGACCGCCGAAGTGTGGACGAACGGCGGCGCGTGGACGCTG CTGCCCGGCGTGCCCGAGACGAACATCGTCGGCCCCGATCCGCAGGGTATCTATCGCGGCGACAATCATCTGTGGCTGTT CGCGCAAGGCAACGGCACGGTTTTCCATGCGGGGCCGAGCTCGCAGATGAACTGGATCTCGACGGCGGGCGGCGGCTCGA TCCAGTCGGCGGGCATGCGCGGCGTCGATCCGTTCAGCATCAACGGCACCGCGTCGCTGTACGACGTCGGCAAGATCCTG AAGGCGGGCGGCGCGAAATCGTACCAGCAGAACGGCAGCGTCACGACCTATGCGTCGAACTCGGTGTACCAGATCGACAT CACGCGCGGGCCGAACCAGCCGGCATCGGTGCAGCGCCTGAACGGCATGACGTACCAGCGCGCGTTCGCCAACAGCGTGA TCCTGCCGAACGGCAGCATCGTGATGATCGGCGGCCAGAGCGTGCCGATGCCGTTCACCGACACGACCGCGATCATGGTC CCCGAAATCTGGGACCCGGCGACGCAACGCTTCAACCTGCTCAAGCCGATGCAGACGCCGCGCACCTATCACAGCACGGC GATCCTGATGGCGGACGGCCGCGTGTTTGCGGGCGGCGGCGGCCAGTGCGGCACCGGCTGCGCAATGAACCATCTGAACG CGGAGATCCTCACGCCGCCTTACCTGCTCAACGCGGACGGCACGCCGGCGCCGCGGCCGGTGATCACGAACGCGCCGGCC ACGGCGAAGCTCGGCGCGACGATCGCCGTGTCGACGCAAGGCCCCGTCGCGTCGTTCGTGCTGATGCGCCTGTCGTCCGT CACGCATACGACGAACAACGATCAGCGGCGCATTCCGCTCGCGATCGCGTCGTCCGGCGGCACGAGCTACCAGCTCGCGA TTCCCGCCGATCCCGGCGTGGTCCTGCCCGGCTACTACATGCTGTTCGCGCTCAACGCGCAAGGCGTGCCGAGCGTGTCG GCATCGATCCGGATCTCATGA
Upstream 100 bases:
>100_bases GCCGGCCGTCGTCCGGTTCGTCATTCGGTCATGCGCCGAACAGTCGAATCGGATTCGGCCACTTTTAATACGGCGCGGGA AAACAGACGATGAGGCGTAT
Downstream 100 bases:
>100_bases CGATGCCCGGCGAACCGAACGCGCGCCGCGCCTCGTTGACGGGACTCGCGCTGAAACTCGCGTTTGGGTTTGGGTTTGCG TTTGCGCTCGCGTGGCCGGG
Product: lectin repeat-containing protein
Products: NA
Alternate protein names: Galactose Oxidase; Ricin B Lectin; Beta-Xylosidase; Kelch Domain Protein; Arabinogalactan Endo-1 4-Beta-Galactosidase; Exported Oxidase; Pectinesterase; Kelch Repeat-Containing Protein; Lectin Repeat-Containing Protein; Ricin-Type Beta-Trefoil Lectin Domain Protein; Pectate Lyase; Kelch Domain-Containing Protein; Subtilisin-Like Serine Protease; Pectate Lyase-Like Protein; Alpha-Glucosidase-Like Protein; Cellulase Cel5K
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MHFFRFAWRHGRYWLCLLIASVLLPQGAAAAVTASYTDIVGADSGLCVSTAGNSSASGAGVVQTSCAGLSNTTWSFVPVG NRYHIVLQGSGLCLNVPGGSLNSGTQLIQYACQGNGQTNDQWTVVAVGSSYRIVSASSGMCVNVSGASHASGAALIQYPC QGAGALNDQFNLYLPVVAATNVTAANSNLCVSVNGGSTAAGASIVQGTCSNQGATGWSLLPAGSGYHVVSQGTGQCLNVY GGYTTSGAPIIQYPCQGDAQTNDQWTLVPVGSKYRLISVSSGMCLNVSGGSLSPGAPLIQYPCQGANALNDQFSLSLPQT FPVTLPSAWSPVIPLPVNPIGIANAPNGKLVMWSADQQLSFQNDVGSKATQTQTAVFDPATNTATQYLETSAGSDMFCTG TAMLPDGRLLVNGGDSSPKTTLYDWTTNTWSAAATMNIARGYQGDTLLSNGSVLTLGGSWSGGQGGKTAEVWTNGGAWTL LPGVPETNIVGPDPQGIYRGDNHLWLFAQGNGTVFHAGPSSQMNWISTAGGGSIQSAGMRGVDPFSINGTASLYDVGKIL KAGGAKSYQQNGSVTTYASNSVYQIDITRGPNQPASVQRLNGMTYQRAFANSVILPNGSIVMIGGQSVPMPFTDTTAIMV PEIWDPATQRFNLLKPMQTPRTYHSTAILMADGRVFAGGGGQCGTGCAMNHLNAEILTPPYLLNADGTPAPRPVITNAPA TAKLGATIAVSTQGPVASFVLMRLSSVTHTTNNDQRRIPLAIASSGGTSYQLAIPADPGVVLPGYYMLFALNAQGVPSVS ASIRIS
Sequences:
>Translated_806_residues MHFFRFAWRHGRYWLCLLIASVLLPQGAAAAVTASYTDIVGADSGLCVSTAGNSSASGAGVVQTSCAGLSNTTWSFVPVG NRYHIVLQGSGLCLNVPGGSLNSGTQLIQYACQGNGQTNDQWTVVAVGSSYRIVSASSGMCVNVSGASHASGAALIQYPC QGAGALNDQFNLYLPVVAATNVTAANSNLCVSVNGGSTAAGASIVQGTCSNQGATGWSLLPAGSGYHVVSQGTGQCLNVY GGYTTSGAPIIQYPCQGDAQTNDQWTLVPVGSKYRLISVSSGMCLNVSGGSLSPGAPLIQYPCQGANALNDQFSLSLPQT FPVTLPSAWSPVIPLPVNPIGIANAPNGKLVMWSADQQLSFQNDVGSKATQTQTAVFDPATNTATQYLETSAGSDMFCTG TAMLPDGRLLVNGGDSSPKTTLYDWTTNTWSAAATMNIARGYQGDTLLSNGSVLTLGGSWSGGQGGKTAEVWTNGGAWTL LPGVPETNIVGPDPQGIYRGDNHLWLFAQGNGTVFHAGPSSQMNWISTAGGGSIQSAGMRGVDPFSINGTASLYDVGKIL KAGGAKSYQQNGSVTTYASNSVYQIDITRGPNQPASVQRLNGMTYQRAFANSVILPNGSIVMIGGQSVPMPFTDTTAIMV PEIWDPATQRFNLLKPMQTPRTYHSTAILMADGRVFAGGGGQCGTGCAMNHLNAEILTPPYLLNADGTPAPRPVITNAPA TAKLGATIAVSTQGPVASFVLMRLSSVTHTTNNDQRRIPLAIASSGGTSYQLAIPADPGVVLPGYYMLFALNAQGVPSVS ASIRIS >Mature_806_residues MHFFRFAWRHGRYWLCLLIASVLLPQGAAAAVTASYTDIVGADSGLCVSTAGNSSASGAGVVQTSCAGLSNTTWSFVPVG NRYHIVLQGSGLCLNVPGGSLNSGTQLIQYACQGNGQTNDQWTVVAVGSSYRIVSASSGMCVNVSGASHASGAALIQYPC QGAGALNDQFNLYLPVVAATNVTAANSNLCVSVNGGSTAAGASIVQGTCSNQGATGWSLLPAGSGYHVVSQGTGQCLNVY GGYTTSGAPIIQYPCQGDAQTNDQWTLVPVGSKYRLISVSSGMCLNVSGGSLSPGAPLIQYPCQGANALNDQFSLSLPQT FPVTLPSAWSPVIPLPVNPIGIANAPNGKLVMWSADQQLSFQNDVGSKATQTQTAVFDPATNTATQYLETSAGSDMFCTG TAMLPDGRLLVNGGDSSPKTTLYDWTTNTWSAAATMNIARGYQGDTLLSNGSVLTLGGSWSGGQGGKTAEVWTNGGAWTL LPGVPETNIVGPDPQGIYRGDNHLWLFAQGNGTVFHAGPSSQMNWISTAGGGSIQSAGMRGVDPFSINGTASLYDVGKIL KAGGAKSYQQNGSVTTYASNSVYQIDITRGPNQPASVQRLNGMTYQRAFANSVILPNGSIVMIGGQSVPMPFTDTTAIMV PEIWDPATQRFNLLKPMQTPRTYHSTAILMADGRVFAGGGGQCGTGCAMNHLNAEILTPPYLLNADGTPAPRPVITNAPA TAKLGATIAVSTQGPVASFVLMRLSSVTHTTNNDQRRIPLAIASSGGTSYQLAIPADPGVVLPGYYMLFALNAQGVPSVS ASIRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83187; Mature: 83187
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS50231 RICIN_B_LECTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFFRFAWRHGRYWLCLLIASVLLPQGAAAAVTASYTDIVGADSGLCVSTAGNSSASGAG CCCEEEEEECCCEEHHHHHHHHHCCCCCCEEEEECCHHEECCCCCEEEEECCCCCCCCCC VVQTSCAGLSNTTWSFVPVGNRYHIVLQGSGLCLNVPGGSLNSGTQLIQYACQGNGQTND EEEEECCCCCCCCEEEEECCCEEEEEEECCCEEEECCCCCCCCCHHHHHHEECCCCCCCC QWTVVAVGSSYRIVSASSGMCVNVSGASHASGAALIQYPCQGAGALNDQFNLYLPVVAAT CEEEEEECCCEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEC NVTAANSNLCVSVNGGSTAAGASIVQGTCSNQGATGWSLLPAGSGYHVVSQGTGQCLNVY EEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEC GGYTTSGAPIIQYPCQGDAQTNDQWTLVPVGSKYRLISVSSGMCLNVSGGSLSPGAPLIQ CCEECCCCCEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCEEE YPCQGANALNDQFSLSLPQTFPVTLPSAWSPVIPLPVNPIGIANAPNGKLVMWSADQQLS CCCCCCCCCCCCEEEECCCCCCEECCCCCCCEECCCCCCCEECCCCCCCEEEEECCCCCE FQNDVGSKATQTQTAVFDPATNTATQYLETSAGSDMFCTGTAMLPDGRLLVNGGDSSPKT ECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCCCE TLYDWTTNTWSAAATMNIARGYQGDTLLSNGSVLTLGGSWSGGQGGKTAEVWTNGGAWTL EEEEECCCCCCEEEEEEECCCCCCCEEECCCCEEEECCCCCCCCCCCEEEEEECCCCEEE LPGVPETNIVGPDPQGIYRGDNHLWLFAQGNGTVFHAGPSSQMNWISTAGGGSIQSAGMR ECCCCCCCEECCCCCCEEECCCEEEEEECCCCEEEECCCCCCCCEEEECCCCCCCCCCCC GVDPFSINGTASLYDVGKILKAGGAKSYQQNGSVTTYASNSVYQIDITRGPNQPASVQRL CCCCEECCCCCHHHHHHHHHHCCCCCCHHCCCCEEEEECCCEEEEEEECCCCCCCHHHHH NGMTYQRAFANSVILPNGSIVMIGGQSVPMPFTDTTAIMVPEIWDPATQRFNLLKPMQTP CCCEEEHHHHCCEEECCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCC RTYHSTAILMADGRVFAGGGGQCGTGCAMNHLNAEILTPPYLLNADGTPAPRPVITNAPA CCCCCEEEEEECCEEEECCCCCCCCCHHHHCCCCEEECCCEEECCCCCCCCCCEEECCCC TAKLGATIAVSTQGPVASFVLMRLSSVTHTTNNDQRRIPLAIASSGGTSYQLAIPADPGV CEECCEEEEEECCCCHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCCEEEEEECCCCCE VLPGYYMLFALNAQGVPSVSASIRIS ECCCEEEEEEECCCCCCCCCEEEEEC >Mature Secondary Structure MHFFRFAWRHGRYWLCLLIASVLLPQGAAAAVTASYTDIVGADSGLCVSTAGNSSASGAG CCCEEEEEECCCEEHHHHHHHHHCCCCCCEEEEECCHHEECCCCCEEEEECCCCCCCCCC VVQTSCAGLSNTTWSFVPVGNRYHIVLQGSGLCLNVPGGSLNSGTQLIQYACQGNGQTND EEEEECCCCCCCCEEEEECCCEEEEEEECCCEEEECCCCCCCCCHHHHHHEECCCCCCCC QWTVVAVGSSYRIVSASSGMCVNVSGASHASGAALIQYPCQGAGALNDQFNLYLPVVAAT CEEEEEECCCEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEC NVTAANSNLCVSVNGGSTAAGASIVQGTCSNQGATGWSLLPAGSGYHVVSQGTGQCLNVY EEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEC GGYTTSGAPIIQYPCQGDAQTNDQWTLVPVGSKYRLISVSSGMCLNVSGGSLSPGAPLIQ CCEECCCCCEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCEEE YPCQGANALNDQFSLSLPQTFPVTLPSAWSPVIPLPVNPIGIANAPNGKLVMWSADQQLS CCCCCCCCCCCCEEEECCCCCCEECCCCCCCEECCCCCCCEECCCCCCCEEEEECCCCCE FQNDVGSKATQTQTAVFDPATNTATQYLETSAGSDMFCTGTAMLPDGRLLVNGGDSSPKT ECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCCCE TLYDWTTNTWSAAATMNIARGYQGDTLLSNGSVLTLGGSWSGGQGGKTAEVWTNGGAWTL EEEEECCCCCCEEEEEEECCCCCCCEEECCCCEEEECCCCCCCCCCCEEEEEECCCCEEE LPGVPETNIVGPDPQGIYRGDNHLWLFAQGNGTVFHAGPSSQMNWISTAGGGSIQSAGMR ECCCCCCCEECCCCCCEEECCCEEEEEECCCCEEEECCCCCCCCEEEECCCCCCCCCCCC GVDPFSINGTASLYDVGKILKAGGAKSYQQNGSVTTYASNSVYQIDITRGPNQPASVQRL CCCCEECCCCCHHHHHHHHHHCCCCCCHHCCCCEEEEECCCEEEEEEECCCCCCCHHHHH NGMTYQRAFANSVILPNGSIVMIGGQSVPMPFTDTTAIMVPEIWDPATQRFNLLKPMQTP CCCEEEHHHHCCEEECCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCC RTYHSTAILMADGRVFAGGGGQCGTGCAMNHLNAEILTPPYLLNADGTPAPRPVITNAPA CCCCCEEEEEECCEEEECCCCCCCCCHHHHCCCCEEECCCEEECCCCCCCCCCEEECCCC TAKLGATIAVSTQGPVASFVLMRLSSVTHTTNNDQRRIPLAIASSGGTSYQLAIPADPGV CEECCEEEEEECCCCHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCCEEEEEECCCCCE VLPGYYMLFALNAQGVPSVSASIRIS ECCCEEEEEEECCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA