| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819455
Identifier: 76819455
GI number: 76819455
Start: 1220085
End: 1221215
Strand: Direct
Name: 76819455
Synonym: BURPS1710b_A0960
Alternate gene names: NA
Gene position: 1220085-1221215 (Clockwise)
Preceding gene: 76818449
Following gene: 76818531
Centisome position: 38.35
GC content: 70.56
Gene sequence:
>1131_bases ATGCCGCGAGGGGCGCGACGCACGCCGCCGGACACACGATCACCATTCTCCACAATCCGCGACACCACATTTCCCCGTAC GGGATGTACCATTGCGCCCCGTACGCGCCGCATTCCGAGACCTGGCCGAGCGACGTACGCGAAGGCATTTCGTAAGCCGG ATCATCGAGAAATCCAGGACGCGCAAATGGGAGATGTGAACAGAACCGGCTGGCCGCCCCGTTTACCGCCGCGGCTCAAA CGCATCTGGTACGGTGCGGGCGGCCTGCGCGCCGGCTGGGCCGTGCTGCTTTACGCGGCGATCGTCGCGGCGATCCTGCT TGCGCTCGGCGCCGCCGCGCGCATCGCGCATCATCCGTTCCGGCCGCGCGGCGATCTGAGCACGGCCGGCCAGATGCCGT TCGAGCTCGCGCTGTGCGCGGCCGCGCTGATCGCCACGCACGTGATGAGCCGCCTCGATCGCCGCTCGTGGCTCGATTAC GGCCTGCGCGCGCGGCGCGCCGCGTTGCATTTCGGATGGGGCGCGTTCTGCAGCCTCGCCGCCGTGTCGGCGATCATGGG CCTGCTCGTCGCCACCGGCGGCGCGACGATCGAATACTCGGGCGCGAACCGCGCGGCTGCGTTCGAATCGGCCGTCACCT GGGCGTGCGCGTTCGTGCTCGTCGCGCTCGCGGAGGAAATCGCGTTTCGCGGCTATGCGTTCTTCAAGCTCGCGCAGCGC ACCCACCCCGTCGTCGCGGCGGCGCTCACGTCGCTCGCGTTCGGCCTCTCGCACGTGTCGAACCGCAACGAGAACATCGC GGGCATCGTGCCCGTCGTGATCTACGGGCTCGTCGCATGCCTCGCGATCTGGCGCACCGGCTCGCTGTGGTGGGCGCTCG GCGAGCACGCGATGTGGGACTGGAGCGAATCGTTCCTGTTCGGCGCGGCCGACAGCGGGCTCACCGCGCACGACACGCTG TTCAAGAGCCATGCGATCGGCCCCGTGTGGCTGAGCGGCGGCACGGTCGGCCCCGAGGCGAGCGTGCTCGTGTTTCCGGC GCTCGCGGCGCTCGCGTACGTCGCCTGGCGCCTGCCGTCGCGCATGGTGAGCGGCCCGCCGCTCGCGCGCGGACGCCGGC AGGCGGCGTGA
Upstream 100 bases:
>100_bases ATCGGCCCGCGTATCGACACGCTACACGCTGACCGGGTAGGCCCGCTGCAGCGGCCGCCGCAGCAACGCGCCCGAAAACG AAGCGGGTCGAGCGCGCCGA
Downstream 100 bases:
>100_bases GCCGGCCTCGCCGACCGGCTCGCGATCGCTCTTCCCGCGGCCCGCTTGCCACGCCCCTTCAATCGTCTTTCGGCTGAGTC GCGATCGCCTCACCCGCGCC
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; Metal-Dependent Membrane Protease; Caax Amino Protease Family; Transmembrane Protein; Protease CAAX Amino Terminal Family; Caax Amino Terminal Protease Family; Protease; CAAX Amino Protease; CAAX-Like Membrane Endopeptidase
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MPRGARRTPPDTRSPFSTIRDTTFPRTGCTIAPRTRRIPRPGRATYAKAFRKPDHREIQDAQMGDVNRTGWPPRLPPRLK RIWYGAGGLRAGWAVLLYAAIVAAILLALGAAARIAHHPFRPRGDLSTAGQMPFELALCAAALIATHVMSRLDRRSWLDY GLRARRAALHFGWGAFCSLAAVSAIMGLLVATGGATIEYSGANRAAAFESAVTWACAFVLVALAEEIAFRGYAFFKLAQR THPVVAAALTSLAFGLSHVSNRNENIAGIVPVVIYGLVACLAIWRTGSLWWALGEHAMWDWSESFLFGAADSGLTAHDTL FKSHAIGPVWLSGGTVGPEASVLVFPALAALAYVAWRLPSRMVSGPPLARGRRQAA
Sequences:
>Translated_376_residues MPRGARRTPPDTRSPFSTIRDTTFPRTGCTIAPRTRRIPRPGRATYAKAFRKPDHREIQDAQMGDVNRTGWPPRLPPRLK RIWYGAGGLRAGWAVLLYAAIVAAILLALGAAARIAHHPFRPRGDLSTAGQMPFELALCAAALIATHVMSRLDRRSWLDY GLRARRAALHFGWGAFCSLAAVSAIMGLLVATGGATIEYSGANRAAAFESAVTWACAFVLVALAEEIAFRGYAFFKLAQR THPVVAAALTSLAFGLSHVSNRNENIAGIVPVVIYGLVACLAIWRTGSLWWALGEHAMWDWSESFLFGAADSGLTAHDTL FKSHAIGPVWLSGGTVGPEASVLVFPALAALAYVAWRLPSRMVSGPPLARGRRQAA >Mature_375_residues PRGARRTPPDTRSPFSTIRDTTFPRTGCTIAPRTRRIPRPGRATYAKAFRKPDHREIQDAQMGDVNRTGWPPRLPPRLKR IWYGAGGLRAGWAVLLYAAIVAAILLALGAAARIAHHPFRPRGDLSTAGQMPFELALCAAALIATHVMSRLDRRSWLDYG LRARRAALHFGWGAFCSLAAVSAIMGLLVATGGATIEYSGANRAAAFESAVTWACAFVLVALAEEIAFRGYAFFKLAQRT HPVVAAALTSLAFGLSHVSNRNENIAGIVPVVIYGLVACLAIWRTGSLWWALGEHAMWDWSESFLFGAADSGLTAHDTLF KSHAIGPVWLSGGTVGPEASVLVFPALAALAYVAWRLPSRMVSGPPLARGRRQAA
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40572; Mature: 40441
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGARRTPPDTRSPFSTIRDTTFPRTGCTIAPRTRRIPRPGRATYAKAFRKPDHREIQD CCCCCCCCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCHHHHH AQMGDVNRTGWPPRLPPRLKRIWYGAGGLRAGWAVLLYAAIVAAILLALGAAARIAHHPF CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPRGDLSTAGQMPFELALCAAALIATHVMSRLDRRSWLDYGLRARRAALHFGWGAFCSLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AVSAIMGLLVATGGATIEYSGANRAAAFESAVTWACAFVLVALAEEIAFRGYAFFKLAQR HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH THPVVAAALTSLAFGLSHVSNRNENIAGIVPVVIYGLVACLAIWRTGSLWWALGEHAMWD CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCC WSESFLFGAADSGLTAHDTLFKSHAIGPVWLSGGTVGPEASVLVFPALAALAYVAWRLPS CCHHHEEECCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH RMVSGPPLARGRRQAA HHCCCCCCCCCCCCCC >Mature Secondary Structure PRGARRTPPDTRSPFSTIRDTTFPRTGCTIAPRTRRIPRPGRATYAKAFRKPDHREIQD CCCCCCCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCHHHHH AQMGDVNRTGWPPRLPPRLKRIWYGAGGLRAGWAVLLYAAIVAAILLALGAAARIAHHPF CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPRGDLSTAGQMPFELALCAAALIATHVMSRLDRRSWLDYGLRARRAALHFGWGAFCSLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AVSAIMGLLVATGGATIEYSGANRAAAFESAVTWACAFVLVALAEEIAFRGYAFFKLAQR HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH THPVVAAALTSLAFGLSHVSNRNENIAGIVPVVIYGLVACLAIWRTGSLWWALGEHAMWD CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCC WSESFLFGAADSGLTAHDTLFKSHAIGPVWLSGGTVGPEASVLVFPALAALAYVAWRLPS CCHHHEEECCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH RMVSGPPLARGRRQAA HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA