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The map label for this gene is rcsB [H]

Identifier: 76819334

GI number: 76819334

Start: 1998018

End: 1998710

Strand: Direct

Name: rcsB [H]

Synonym: BURPS1710b_A1634

Alternate gene names: 76819334

Gene position: 1998018-1998710 (Clockwise)

Preceding gene: 76819143

Following gene: 76819458

Centisome position: 62.8

GC content: 59.02

Gene sequence:

>693_bases
ATGAAAATCGATTTGATTGTCGCTGACGATCATCCCGCACTGATAGCCGGAATAGAGCATGCGCTGAGTAAATCCAGTGC
GATTAGCGTTGCAGGCACGGCAAGCAATTCCACTGAATTGGTCGATCTGCTCGCGCGCGAGCGATGCGACATCCTGATTA
CTGATTACGCGATGCCCGGCGGCAGCCATGGTGACGGATTGGGGCTGCTTTCGTTCTTGAGGCGACACTATCCCGATTTG
AAGATCATCGTATTCACGGCGATCGACAATCCCGCGCTCATTGCGTCGATGGCTCGGCTTGGCGTGCGCGCGGTCGTAAA
CAAAATGGATCATATCGACAACTTGATTGCGTCGATCCAGGCCGTCTACGCGGGCGCAACGTACATTCCGGCGGGCGTTG
ACGCGTTCGTATCGTCGCGGCCGGCTGGCGACGAGCACACGCCGGAGATCGAGCGACAACTCTCCGCCCGGGAACTGGAG
ATCGTTCGCCTGTATGTATCCGGGCTTTCCGTCAACGAAATCGCGGCCTACCTGCACCGCAGCAAGCAGGCGGTCAGCAC
GCAGAAGATGAATGCGATGCGAAAGCTCGGCATCGAACGCGATGCCGGCCTGTTCCGCTATGCATATGAAACGGGCCTCA
TGGCGGCCGGCGTGCCGTCCGCGAGTCCGGTCAGCGCGCAGGCCGTGCATTGA

Upstream 100 bases:

>100_bases
GCGGAAATCCGCGTTATGTAAACCACGTACGCCTTGAAGGTCGGGTTGACGGGCGAATGGGTACGTGGTTGATATGACGT
TGATGAAATTTGGGGGTGAA

Downstream 100 bases:

>100_bases
TTGCCGCTTCACCAAGACGCGGGGCCGTTGCGCCTGCCGCGAAATCCTCGATCGTCAGGCATCCCGCCTCGCACGGCTTG
ACGTGAAGCCGGCGATCGCG

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKIDLIVADDHPALIAGIEHALSKSSAISVAGTASNSTELVDLLARERCDILITDYAMPGGSHGDGLGLLSFLRRHYPDL
KIIVFTAIDNPALIASMARLGVRAVVNKMDHIDNLIASIQAVYAGATYIPAGVDAFVSSRPAGDEHTPEIERQLSARELE
IVRLYVSGLSVNEIAAYLHRSKQAVSTQKMNAMRKLGIERDAGLFRYAYETGLMAAGVPSASPVSAQAVH

Sequences:

>Translated_230_residues
MKIDLIVADDHPALIAGIEHALSKSSAISVAGTASNSTELVDLLARERCDILITDYAMPGGSHGDGLGLLSFLRRHYPDL
KIIVFTAIDNPALIASMARLGVRAVVNKMDHIDNLIASIQAVYAGATYIPAGVDAFVSSRPAGDEHTPEIERQLSARELE
IVRLYVSGLSVNEIAAYLHRSKQAVSTQKMNAMRKLGIERDAGLFRYAYETGLMAAGVPSASPVSAQAVH
>Mature_230_residues
MKIDLIVADDHPALIAGIEHALSKSSAISVAGTASNSTELVDLLARERCDILITDYAMPGGSHGDGLGLLSFLRRHYPDL
KIIVFTAIDNPALIASMARLGVRAVVNKMDHIDNLIASIQAVYAGATYIPAGVDAFVSSRPAGDEHTPEIERQLSARELE
IVRLYVSGLSVNEIAAYLHRSKQAVSTQKMNAMRKLGIERDAGLFRYAYETGLMAAGVPSASPVSAQAVH

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=205, Percent_Identity=35.609756097561, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1788222, Length=215, Percent_Identity=29.7674418604651, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1786747, Length=205, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788712, Length=203, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1788521, Length=195, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1790102, Length=208, Percent_Identity=27.4038461538462, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24593; Mature: 24593

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLIVADDHPALIAGIEHALSKSSAISVAGTASNSTELVDLLARERCDILITDYAMPG
CEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCC
GSHGDGLGLLSFLRRHYPDLKIIVFTAIDNPALIASMARLGVRAVVNKMDHIDNLIASIQ
CCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVYAGATYIPAGVDAFVSSRPAGDEHTPEIERQLSARELEIVRLYVSGLSVNEIAAYLHR
HHHCCCEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SKQAVSTQKMNAMRKLGIERDAGLFRYAYETGLMAAGVPSASPVSAQAVH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIDLIVADDHPALIAGIEHALSKSSAISVAGTASNSTELVDLLARERCDILITDYAMPG
CEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCC
GSHGDGLGLLSFLRRHYPDLKIIVFTAIDNPALIASMARLGVRAVVNKMDHIDNLIASIQ
CCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVYAGATYIPAGVDAFVSSRPAGDEHTPEIERQLSARELEIVRLYVSGLSVNEIAAYLHR
HHHCCCEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SKQAVSTQKMNAMRKLGIERDAGLFRYAYETGLMAAGVPSASPVSAQAVH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]