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The map label for this gene is ompA2 [H]

Identifier: 76819194

GI number: 76819194

Start: 1954129

End: 1955805

Strand: Direct

Name: ompA2 [H]

Synonym: BURPS1710b_A1604

Alternate gene names: 76819194

Gene position: 1954129-1955805 (Clockwise)

Preceding gene: 76817325

Following gene: 76819078

Centisome position: 61.42

GC content: 62.49

Gene sequence:

>1677_bases
ATGTCGCGTCAGATTCGATTTTGGCTCGTATGGGGCGCCATACCCTTCGTGGTGCTCGCGAGCCTTTGCCTGCCGTTGCG
CATGCAGCCGGAATGGTCTCATGTGCTGACCATCGTTCTGGTCATTGCCGCCATCGTGCTGGCGATCGAAATATTCGAAC
ACTCTCGCGAGACAGCGCAAGACCGAACGGCCGAAGCCGAAATCGACGATCACGAACTGGCGGTGATCATCGTCGCGGGC
CCTCACGCATCGTCGCTTTTCAATAGCAGCGGGGACGATACGGCGTTTCGGCGCGAAGCCGGCGCGTTATGGCTGCGCGC
CGACAGCGTCGAGCAATTGCGAGACACGATGATGCGCGTCAAGGCGTCGCGCGGACGGTTCCCGGACGCCGCCGTGGTGC
CGCTCGTATCGGAAAGCGATGACGAAAGCGACATGAGGCAGGCGTTCGCGAAGTGGCGAACCGAACTCCGCGAAGCGCTT
TGCTATCCCGATGCGGCCTATGTCCTGCCTTGCTATCTCGCCGTCTACACGTGTCTTGGATTCAAGGGAGCCGACGGCGC
GCGTCCGAAGTGGACGGGCGATGCAATAGAAATCGGCACGAGGCAGATGAATGCCGCATCGAAAGTGGGCGAGCTGCTCG
CATCGATTCGACAACAATTGCTTCGGCCGTCGCCCACCGGTTCGTCGGCGCAGTGCGCGCTGGGGCTCGGCGTGTTCGAT
TGGCTCGACGCCACGGCGCTGCTGTCGTCGATGACCATGCTGGCGAATACCCCGCCATTCATGCTGAAAGGGCTGACGCT
CGCGGATGTCGGCAGACGGCCGATACGTCCGGGAGCGTGGACGCGCTGGCTCACTGTTCGGACCGGTCTCCATATTCGCC
AGACCAAATCGTCGATGGCGCCGCTTCCCGTGCCGCGCGTGGCGAAGCATGCCGAAAGCGGCATTCGGGAAGGATGGAGC
AGCGCGCGCCATCTCGTTTCCACTCGTGCGAGCTTCGTGCCGGCGCTCGTGTTCTCCACTGTTTCGACGCTGGGCATCGC
CGTGGCGGTCTCGGGCTGGATGAACAGCCGCATGATCCAGCGGGTGTCGAACGATATCGCGGATTATCGGAGCGGAGCCG
ACGAGTGGATCGGGAGGAAGCGCTTTGCGCAGGCCCGCCTCGAACACGATCGCACGGCGATCGTGCAGACGCTGCTCGAT
GGCGTACCGACCGGTTTCGGCTGGGGACTCTACCGGGGGCAGGAGTTGCTGGTCAAGCTCGATACGGTGCTGGATTCGCC
GCGCGCGGCGTCGATCGCGATGCAGCTCGACACGGTATCGCTGTTCGCCGCAGGCAAGGCTACATTTTCTCCGGGCGCCG
CGCAGCGTGAGTTGCAACATGCATTGCGGATGATTCTCGCCAATCCGGAGCAACGTGTGCTGATCGTCGGTCATGCAGAC
AGCTCCGGCTCGGATGCGGCCAATTTTCAGTTATCCGAAGCGCGTGCGCGCGCGATTCGTGACTGGTTCGTCGATCAAGG
CGTGCTGAAGACGCGCTTCATCGTGCAAGGAGCCGGCGATACGCATCCGATCGCCGATAACGACAGCCCTTCGGGACGTG
CGCAGAATCGCCGTGTCGAGGTCTTGCTGATTCCGGACGTTTCTTCCGACAGGAAGGCGAGCGGTACGGAACTATAG

Upstream 100 bases:

>100_bases
TGTGGCTCGTTATCGATACACGTCTGAGCCATGAAGTGGAACAGATGGAAGTCACGTCCGGAGATGAAGCAGCGATTCAT
CCGGCATCGGGGGATTGAGC

Downstream 100 bases:

>100_bases
GCCGCCGGGCGGCGGCACGGTTGCCGTGGCGCCCGCACGCGTGCCGATCGCGCAATCGATCAGCGTGGAAGTTTAAAGGC
GCTCGGACGAGCGAGCGCCT

Product: OmpA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MSRQIRFWLVWGAIPFVVLASLCLPLRMQPEWSHVLTIVLVIAAIVLAIEIFEHSRETAQDRTAEAEIDDHELAVIIVAG
PHASSLFNSSGDDTAFRREAGALWLRADSVEQLRDTMMRVKASRGRFPDAAVVPLVSESDDESDMRQAFAKWRTELREAL
CYPDAAYVLPCYLAVYTCLGFKGADGARPKWTGDAIEIGTRQMNAASKVGELLASIRQQLLRPSPTGSSAQCALGLGVFD
WLDATALLSSMTMLANTPPFMLKGLTLADVGRRPIRPGAWTRWLTVRTGLHIRQTKSSMAPLPVPRVAKHAESGIREGWS
SARHLVSTRASFVPALVFSTVSTLGIAVAVSGWMNSRMIQRVSNDIADYRSGADEWIGRKRFAQARLEHDRTAIVQTLLD
GVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD
SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVEVLLIPDVSSDRKASGTEL

Sequences:

>Translated_558_residues
MSRQIRFWLVWGAIPFVVLASLCLPLRMQPEWSHVLTIVLVIAAIVLAIEIFEHSRETAQDRTAEAEIDDHELAVIIVAG
PHASSLFNSSGDDTAFRREAGALWLRADSVEQLRDTMMRVKASRGRFPDAAVVPLVSESDDESDMRQAFAKWRTELREAL
CYPDAAYVLPCYLAVYTCLGFKGADGARPKWTGDAIEIGTRQMNAASKVGELLASIRQQLLRPSPTGSSAQCALGLGVFD
WLDATALLSSMTMLANTPPFMLKGLTLADVGRRPIRPGAWTRWLTVRTGLHIRQTKSSMAPLPVPRVAKHAESGIREGWS
SARHLVSTRASFVPALVFSTVSTLGIAVAVSGWMNSRMIQRVSNDIADYRSGADEWIGRKRFAQARLEHDRTAIVQTLLD
GVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD
SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVEVLLIPDVSSDRKASGTEL
>Mature_557_residues
SRQIRFWLVWGAIPFVVLASLCLPLRMQPEWSHVLTIVLVIAAIVLAIEIFEHSRETAQDRTAEAEIDDHELAVIIVAGP
HASSLFNSSGDDTAFRREAGALWLRADSVEQLRDTMMRVKASRGRFPDAAVVPLVSESDDESDMRQAFAKWRTELREALC
YPDAAYVLPCYLAVYTCLGFKGADGARPKWTGDAIEIGTRQMNAASKVGELLASIRQQLLRPSPTGSSAQCALGLGVFDW
LDATALLSSMTMLANTPPFMLKGLTLADVGRRPIRPGAWTRWLTVRTGLHIRQTKSSMAPLPVPRVAKHAESGIREGWSS
ARHLVSTRASFVPALVFSTVSTLGIAVAVSGWMNSRMIQRVSNDIADYRSGADEWIGRKRFAQARLEHDRTAIVQTLLDG
VPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADS
SGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVEVLLIPDVSSDRKASGTEL

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=115, Percent_Identity=33.9130434782609, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 61058; Mature: 60926

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQIRFWLVWGAIPFVVLASLCLPLRMQPEWSHVLTIVLVIAAIVLAIEIFEHSRETAQ
CCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRTAEAEIDDHELAVIIVAGPHASSLFNSSGDDTAFRREAGALWLRADSVEQLRDTMMRV
HCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHH
KASRGRFPDAAVVPLVSESDDESDMRQAFAKWRTELREALCYPDAAYVLPCYLAVYTCLG
HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
FKGADGARPKWTGDAIEIGTRQMNAASKVGELLASIRQQLLRPSPTGSSAQCALGLGVFD
CCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHH
WLDATALLSSMTMLANTPPFMLKGLTLADVGRRPIRPGAWTRWLTVRTGLHIRQTKSSMA
HHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCCCCCEEEEEEECCCEEEHHHCCCC
PLPVPRVAKHAESGIREGWSSARHLVSTRASFVPALVFSTVSTLGIAVAVSGWMNSRMIQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVSNDIADYRSGADEWIGRKRFAQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHH
DTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD
HHHHCCCCHHEEEEEEHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC
SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE
CCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCEEE
VLLIPDVSSDRKASGTEL
EEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SRQIRFWLVWGAIPFVVLASLCLPLRMQPEWSHVLTIVLVIAAIVLAIEIFEHSRETAQ
CCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRTAEAEIDDHELAVIIVAGPHASSLFNSSGDDTAFRREAGALWLRADSVEQLRDTMMRV
HCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHH
KASRGRFPDAAVVPLVSESDDESDMRQAFAKWRTELREALCYPDAAYVLPCYLAVYTCLG
HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
FKGADGARPKWTGDAIEIGTRQMNAASKVGELLASIRQQLLRPSPTGSSAQCALGLGVFD
CCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHH
WLDATALLSSMTMLANTPPFMLKGLTLADVGRRPIRPGAWTRWLTVRTGLHIRQTKSSMA
HHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCCCCCEEEEEEECCCEEEHHHCCCC
PLPVPRVAKHAESGIREGWSSARHLVSTRASFVPALVFSTVSTLGIAVAVSGWMNSRMIQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVSNDIADYRSGADEWIGRKRFAQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHH
DTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD
HHHHCCCCHHEEEEEEHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC
SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE
CCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCEEE
VLLIPDVSSDRKASGTEL
EEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]