| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819165
Identifier: 76819165
GI number: 76819165
Start: 645745
End: 646899
Strand: Direct
Name: 76819165
Synonym: BURPS1710b_A0465
Alternate gene names: NA
Gene position: 645745-646899 (Clockwise)
Preceding gene: 76818271
Following gene: 76818625
Centisome position: 20.3
GC content: 66.49
Gene sequence:
>1155_bases GTGATCGATTCCATCCGCTCTTCGTCAACCGGGCCGCGTGACGCGCCCGGCAAGCGCCTCGCCGTCGGCATCTCGCTGTT CGCCCGCGACGGTCAGGCGATCTGGGAAAACGGCATTCATCAGAACATTGCGTTCCTCGCGATGATGCTCAAGCAGTCCG ACCGGATCGGGCCGGTCTACTTCCTGAACGGCGGCGACGCGAAAGCGTTGCCCGCCGGGCTCGATCTCGGCGGCCTCGAC GTGCCGCTCGTGCAGCCGCGCGACGTGTCGCACGCGCTCGACGTCGTGATCGAGATGGGCGCGCAACTGCCCGTCGACTG GCTCAAGCACATGAAGGCGCTCGGCAAGAAGCTCGTCGTGTGCTTCGTCGGCCACACGTACAGCGGGCTGACCGAGACGC CGATGTTCAACCGGCCGTCGGGCCACATCTTCAACGGCGGGCCGTTCGACGAGGTATGGATCCTGCCGAAATCCGAGAAG ATCGACGCGCCGCTGCTGCGCACGCTCACGCGCGCGCCGGTGCACGTCGTGCCGCACATCTGGTCGCCGTACTTCATCGA GCGCCGCGCGCGCGAGCTCGAAGCCGCGGGCCTGCGCTTCGGCTATGCGCCCGGCCGCGCGAAGTGGCGGCTGTCGATCC TCGAGCCGAACATCTCGGTCGTGAAGACCTGCCACTACCCGATGCTCGCCGCCGACGAGTTCCACCGCGCGCAGCCCGAC GCGGTCGAGCACCTGTTCGTCGTGAACTCGCTGCACATGAAGGAGCATCCGACGTTCGTCCATTTCGCGAACAGTCTCGA TCTCGTGCGCGAGCACAAGGCCACCTTCGAGCCGCGCATCGATCTGCCGTCGTTCCTCGCGCAACACGGCGACGCGGTGA TCTCGCACCAGTGGGAAAACCCGCAGAACTATCTGTACTACGACGTGCTGTACGGCGGCTACCCGCTCGTGCACAACTCG CCGATGCTCGGCGACGCCGGCTACTACTACCCGGAATTCGATTCCGCGGCGGGCAGCCGCGCGCTGCAGCACGCGTGGCG CCATCACGACGCGCATCTCGACGACTATCGCCGCCATGCCGACGCGCTGCTGCAAGGCGTGTCGATCGACAATCGCCGCA ACCTCGACGCGTACGTCGCGCGTCTGTTCGCCTGA
Upstream 100 bases:
>100_bases TCGGCGCGAGCGCGCACGTGACAACCAACGGCATTCTCAAACTGGGCATCGGCGTGTCGGGGCAGAACAAGACCTTCGGT GCAGGATATGGATATAGCTG
Downstream 100 bases:
>100_bases GCCCTTCCCGGAGAAAAACGCATGTCAGAAACCACCGCCCGTGACGTGCCCAACGGCGGCAAGCGTCTCGTCGTCGGCGT GTCGCTGTTCGTGCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIDSIRSSSTGPRDAPGKRLAVGISLFARDGQAIWENGIHQNIAFLAMMLKQSDRIGPVYFLNGGDAKALPAGLDLGGLD VPLVQPRDVSHALDVVIEMGAQLPVDWLKHMKALGKKLVVCFVGHTYSGLTETPMFNRPSGHIFNGGPFDEVWILPKSEK IDAPLLRTLTRAPVHVVPHIWSPYFIERRARELEAAGLRFGYAPGRAKWRLSILEPNISVVKTCHYPMLAADEFHRAQPD AVEHLFVVNSLHMKEHPTFVHFANSLDLVREHKATFEPRIDLPSFLAQHGDAVISHQWENPQNYLYYDVLYGGYPLVHNS PMLGDAGYYYPEFDSAAGSRALQHAWRHHDAHLDDYRRHADALLQGVSIDNRRNLDAYVARLFA
Sequences:
>Translated_384_residues MIDSIRSSSTGPRDAPGKRLAVGISLFARDGQAIWENGIHQNIAFLAMMLKQSDRIGPVYFLNGGDAKALPAGLDLGGLD VPLVQPRDVSHALDVVIEMGAQLPVDWLKHMKALGKKLVVCFVGHTYSGLTETPMFNRPSGHIFNGGPFDEVWILPKSEK IDAPLLRTLTRAPVHVVPHIWSPYFIERRARELEAAGLRFGYAPGRAKWRLSILEPNISVVKTCHYPMLAADEFHRAQPD AVEHLFVVNSLHMKEHPTFVHFANSLDLVREHKATFEPRIDLPSFLAQHGDAVISHQWENPQNYLYYDVLYGGYPLVHNS PMLGDAGYYYPEFDSAAGSRALQHAWRHHDAHLDDYRRHADALLQGVSIDNRRNLDAYVARLFA >Mature_384_residues MIDSIRSSSTGPRDAPGKRLAVGISLFARDGQAIWENGIHQNIAFLAMMLKQSDRIGPVYFLNGGDAKALPAGLDLGGLD VPLVQPRDVSHALDVVIEMGAQLPVDWLKHMKALGKKLVVCFVGHTYSGLTETPMFNRPSGHIFNGGPFDEVWILPKSEK IDAPLLRTLTRAPVHVVPHIWSPYFIERRARELEAAGLRFGYAPGRAKWRLSILEPNISVVKTCHYPMLAADEFHRAQPD AVEHLFVVNSLHMKEHPTFVHFANSLDLVREHKATFEPRIDLPSFLAQHGDAVISHQWENPQNYLYYDVLYGGYPLVHNS PMLGDAGYYYPEFDSAAGSRALQHAWRHHDAHLDDYRRHADALLQGVSIDNRRNLDAYVARLFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43113; Mature: 43113
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSIRSSSTGPRDAPGKRLAVGISLFARDGQAIWENGIHQNIAFLAMMLKQSDRIGPVY CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEE FLNGGDAKALPAGLDLGGLDVPLVQPRDVSHALDVVIEMGAQLPVDWLKHMKALGKKLVV EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEE CFVGHTYSGLTETPMFNRPSGHIFNGGPFDEVWILPKSEKIDAPLLRTLTRAPVHVVPHI EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEECCC WSPYFIERRARELEAAGLRFGYAPGRAKWRLSILEPNISVVKTCHYPMLAADEFHRAQPD CCHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCCEEEECCCCCEECHHHHCCCCH AVEHLFVVNSLHMKEHPTFVHFANSLDLVREHKATFEPRIDLPSFLAQHGDAVISHQWEN HHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCC PQNYLYYDVLYGGYPLVHNSPMLGDAGYYYPEFDSAAGSRALQHAWRHHDAHLDDYRRHA CCCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH DALLQGVSIDNRRNLDAYVARLFA HHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MIDSIRSSSTGPRDAPGKRLAVGISLFARDGQAIWENGIHQNIAFLAMMLKQSDRIGPVY CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEE FLNGGDAKALPAGLDLGGLDVPLVQPRDVSHALDVVIEMGAQLPVDWLKHMKALGKKLVV EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEE CFVGHTYSGLTETPMFNRPSGHIFNGGPFDEVWILPKSEKIDAPLLRTLTRAPVHVVPHI EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEECCC WSPYFIERRARELEAAGLRFGYAPGRAKWRLSILEPNISVVKTCHYPMLAADEFHRAQPD CCHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCCEEEECCCCCEECHHHHCCCCH AVEHLFVVNSLHMKEHPTFVHFANSLDLVREHKATFEPRIDLPSFLAQHGDAVISHQWEN HHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCC PQNYLYYDVLYGGYPLVHNSPMLGDAGYYYPEFDSAAGSRALQHAWRHHDAHLDDYRRHA CCCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH DALLQGVSIDNRRNLDAYVARLFA HHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA