Click here to switch to the map view.

The map label for this gene is prnC

Identifier: 76819111

GI number: 76819111

Start: 1397719

End: 1399419

Strand: Direct

Name: prnC

Synonym: BURPS1710b_A1117

Alternate gene names: NA

Gene position: 1397719-1399419 (Clockwise)

Preceding gene: 76819405

Following gene: 76817889

Centisome position: 43.93

GC content: 63.96

Gene sequence:

>1701_bases
ATGACTCAGAAGAGCCCCGCGAACGGGCGCGATAGCCATCACTTCGACGTGATCATCCTCGGCTCGGGCATGTCCGGCAC
CCAGATGGGAGCCATCCTGGCCAAGCAACAGTTTCGCGTGCTGATCATCGAGGAGTCGTCGCACCCGCGGTTCACGATCG
GCGAATCGTCGATCCCCGAGACGTCTCTCATGAACCGCATCATCGCCGATCGCTACGGCATTCCGGAGCTCGACCACATC
ACGTCGTTCTACGCGACGCAGCGTTACGTCGCGTCGAGCACGGGCATCAAGCGCAACTTCGGCTTCGTGTTCCATAAACC
CGGCCAGGAGCACGACCCGAAAGAGTTCACGCAGTGCGTCATTCCCGAGCTGCCGTGGGGTCCGGAGAGCCACTATTACC
GGCAAGACGTCGACGCCTACCTGTTGCAAGCCGCCATCAAATACGGCTGCACGGTTCGCCAGAAGACGAACGTGACCGAA
TACCACGCCGACAAAAACGGCGTCGCGGTGACCACCGCCCAGGGCGAACGGTTCACCGGCCGGTACATGATCGACTGCGG
CGGCCCCCGCGCGCCGCTCGCGATCCAGTTCAAGCTCCGCGAAGAGCCGTGTCGCTTCAAGACGCACTCGCGCAGCCTCT
ACACGCACATGCTCGGGGTCAAGCCGTTCGACGACATCTTCAAGGTCAAGGGGCAGCGCTGGCGCTGGCACGAGGGGACC
TTGCACCACATGTTCGCGGGCGGCTGGCTCTGGGTGATTCCGTTCAACAACCACCCGCGCTCGACCAACAACCTGGTGAG
CGTCGGCCTGCAGCTCGACACGCGTGTTCACCCGAAAACGGACATCCCCGCGCAGCAGGAATTCGACGAGTTCCTCGCGC
GCTTCCCGAGTATCGGGGCGCAGTTCCGGGACGCCGTGCCGGTGCGTGACTGGGTCAAGACCGACCGCCTGCAATTCTCG
TCGCGCGCCTGCGTCGGCGACCGCTACTGCCTGATGCTGCACGCGAACGGATTCATCGACCCGCTCTTCTCCCGAGGGCT
CGAGAACACCGCGGTGACCATCCACGCGCTGGCGGCGCGCCTGATCAGGGCGCTGCGCGACGACGACTTCTCCCCCGAGC
GCTTCGAGTACATCGAGCGCCTGCAGCAGAAGCTTCTGGACCACAACGACGACTTCGTCAGCTGCTGCTACACGGCGTTC
ACGGACTTCCGCCTGTGGGACGCGTTCCACAGGCTGTGGGCGGTCGGCACGATCCTCGGGCAGTTCCGGCTCGTGCAAGC
CCACGCGAGGTTTCGCGCGTCGCGTGACGAGAGCGCGCTCGATCACCTCGACAACAACCCCCCGTACCTCGGGTACCTGT
GCGCGGACATGGAGGAGTACTACCAGTTGTTCAACGACGCCAAGGCGGAGGTCGAGGCCGTGAGCGCCGGGCGCAAGCCG
GCCGAGGAGGCCGCCGCGCGGATTCACGCCCTCATCGACGAACGAGACTTCGCCCGGCCGATGTTCAGCTTCGGGTACTG
CATCACCGGGGCCAAGCCACAGCTCAACAACTCGAAGTACAGCCTACTGCCGGCGATGAAGCTGTTGCATTGGACGCAAA
CCAGCGCGCCGGCAGAGGTGAAAAAGTACTTCGACTACAACCCGATGTTCGCGCTGCTCAAGGCGTACGTCACCACCCGC
ATCGGCTTGGCGCTGAAATAG

Upstream 100 bases:

>100_bases
TCACGCGTGCCGCGCGGTCCCGCCTCCGCGCCGCGCTCGACGGGCCCTGACGCCCGATGCGCGCGCCCATGTGTTCGATC
TCACAAGGAGAGTGTGCCCC

Downstream 100 bases:

>100_bases
TCGGCCGACACCGACACGAAAACGATGAACGACGTTCAATTGGATCAAGCGGACATCAAGGAGCATCCCTCGGGGACGTA
CGATGCGACCACGCGCGTGG

Product: PrnC

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Tryptophan Halogenase; Dehydrogenase; Halogenase B; Alkylhalidase PltM; Halogenase-Like Protein PltD; Oxidoreductase; Halogenase A; FADH2 Dependent Halogenase

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MTQKSPANGRDSHHFDVIILGSGMSGTQMGAILAKQQFRVLIIEESSHPRFTIGESSIPETSLMNRIIADRYGIPELDHI
TSFYATQRYVASSTGIKRNFGFVFHKPGQEHDPKEFTQCVIPELPWGPESHYYRQDVDAYLLQAAIKYGCTVRQKTNVTE
YHADKNGVAVTTAQGERFTGRYMIDCGGPRAPLAIQFKLREEPCRFKTHSRSLYTHMLGVKPFDDIFKVKGQRWRWHEGT
LHHMFAGGWLWVIPFNNHPRSTNNLVSVGLQLDTRVHPKTDIPAQQEFDEFLARFPSIGAQFRDAVPVRDWVKTDRLQFS
SRACVGDRYCLMLHANGFIDPLFSRGLENTAVTIHALAARLIRALRDDDFSPERFEYIERLQQKLLDHNDDFVSCCYTAF
TDFRLWDAFHRLWAVGTILGQFRLVQAHARFRASRDESALDHLDNNPPYLGYLCADMEEYYQLFNDAKAEVEAVSAGRKP
AEEAAARIHALIDERDFARPMFSFGYCITGAKPQLNNSKYSLLPAMKLLHWTQTSAPAEVKKYFDYNPMFALLKAYVTTR
IGLALK

Sequences:

>Translated_566_residues
MTQKSPANGRDSHHFDVIILGSGMSGTQMGAILAKQQFRVLIIEESSHPRFTIGESSIPETSLMNRIIADRYGIPELDHI
TSFYATQRYVASSTGIKRNFGFVFHKPGQEHDPKEFTQCVIPELPWGPESHYYRQDVDAYLLQAAIKYGCTVRQKTNVTE
YHADKNGVAVTTAQGERFTGRYMIDCGGPRAPLAIQFKLREEPCRFKTHSRSLYTHMLGVKPFDDIFKVKGQRWRWHEGT
LHHMFAGGWLWVIPFNNHPRSTNNLVSVGLQLDTRVHPKTDIPAQQEFDEFLARFPSIGAQFRDAVPVRDWVKTDRLQFS
SRACVGDRYCLMLHANGFIDPLFSRGLENTAVTIHALAARLIRALRDDDFSPERFEYIERLQQKLLDHNDDFVSCCYTAF
TDFRLWDAFHRLWAVGTILGQFRLVQAHARFRASRDESALDHLDNNPPYLGYLCADMEEYYQLFNDAKAEVEAVSAGRKP
AEEAAARIHALIDERDFARPMFSFGYCITGAKPQLNNSKYSLLPAMKLLHWTQTSAPAEVKKYFDYNPMFALLKAYVTTR
IGLALK
>Mature_565_residues
TQKSPANGRDSHHFDVIILGSGMSGTQMGAILAKQQFRVLIIEESSHPRFTIGESSIPETSLMNRIIADRYGIPELDHIT
SFYATQRYVASSTGIKRNFGFVFHKPGQEHDPKEFTQCVIPELPWGPESHYYRQDVDAYLLQAAIKYGCTVRQKTNVTEY
HADKNGVAVTTAQGERFTGRYMIDCGGPRAPLAIQFKLREEPCRFKTHSRSLYTHMLGVKPFDDIFKVKGQRWRWHEGTL
HHMFAGGWLWVIPFNNHPRSTNNLVSVGLQLDTRVHPKTDIPAQQEFDEFLARFPSIGAQFRDAVPVRDWVKTDRLQFSS
RACVGDRYCLMLHANGFIDPLFSRGLENTAVTIHALAARLIRALRDDDFSPERFEYIERLQQKLLDHNDDFVSCCYTAFT
DFRLWDAFHRLWAVGTILGQFRLVQAHARFRASRDESALDHLDNNPPYLGYLCADMEEYYQLFNDAKAEVEAVSAGRKPA
EEAAARIHALIDERDFARPMFSFGYCITGAKPQLNNSKYSLLPAMKLLHWTQTSAPAEVKKYFDYNPMFALLKAYVTTRI
GLALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64753; Mature: 64622

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKSPANGRDSHHFDVIILGSGMSGTQMGAILAKQQFRVLIIEESSHPRFTIGESSIPE
CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCEEECCCCCCH
TSLMNRIIADRYGIPELDHITSFYATQRYVASSTGIKRNFGFVFHKPGQEHDPKEFTQCV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHH
IPELPWGPESHYYRQDVDAYLLQAAIKYGCTVRQKTNVTEYHADKNGVAVTTAQGERFTG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCHHEECCCCCEEEEECCCCEECC
RYMIDCGGPRAPLAIQFKLREEPCRFKTHSRSLYTHMLGVKPFDDIFKVKGQRWRWHEGT
CEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCEEECCCC
LHHMFAGGWLWVIPFNNHPRSTNNLVSVGLQLDTRVHPKTDIPAQQEFDEFLARFPSIGA
CCEEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCH
QFRDAVPVRDWVKTDRLQFSSRACVGDRYCLMLHANGFIDPLFSRGLENTAVTIHALAAR
HHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHH
LIRALRDDDFSPERFEYIERLQQKLLDHNDDFVSCCYTAFTDFRLWDAFHRLWAVGTILG
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFRLVQAHARFRASRDESALDHLDNNPPYLGYLCADMEEYYQLFNDAKAEVEAVSAGRKP
HHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHCCCCC
AEEAAARIHALIDERDFARPMFSFGYCITGAKPQLNNSKYSLLPAMKLLHWTQTSAPAEV
HHHHHHHHHHHHCCHHHHCHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
KKYFDYNPMFALLKAYVTTRIGLALK
HHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQKSPANGRDSHHFDVIILGSGMSGTQMGAILAKQQFRVLIIEESSHPRFTIGESSIPE
CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCEEECCCCCCH
TSLMNRIIADRYGIPELDHITSFYATQRYVASSTGIKRNFGFVFHKPGQEHDPKEFTQCV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHH
IPELPWGPESHYYRQDVDAYLLQAAIKYGCTVRQKTNVTEYHADKNGVAVTTAQGERFTG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCHHEECCCCCEEEEECCCCEECC
RYMIDCGGPRAPLAIQFKLREEPCRFKTHSRSLYTHMLGVKPFDDIFKVKGQRWRWHEGT
CEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCEEECCCC
LHHMFAGGWLWVIPFNNHPRSTNNLVSVGLQLDTRVHPKTDIPAQQEFDEFLARFPSIGA
CCEEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCH
QFRDAVPVRDWVKTDRLQFSSRACVGDRYCLMLHANGFIDPLFSRGLENTAVTIHALAAR
HHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHH
LIRALRDDDFSPERFEYIERLQQKLLDHNDDFVSCCYTAFTDFRLWDAFHRLWAVGTILG
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFRLVQAHARFRASRDESALDHLDNNPPYLGYLCADMEEYYQLFNDAKAEVEAVSAGRKP
HHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHCCCCC
AEEAAARIHALIDERDFARPMFSFGYCITGAKPQLNNSKYSLLPAMKLLHWTQTSAPAEV
HHHHHHHHHHHHCCHHHHCHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
KKYFDYNPMFALLKAYVTTRIGLALK
HHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA