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The map label for this gene is 76819078

Identifier: 76819078

GI number: 76819078

Start: 1956195

End: 1956734

Strand: Direct

Name: 76819078

Synonym: BURPS1710b_A1605

Alternate gene names: NA

Gene position: 1956195-1956734 (Clockwise)

Preceding gene: 76819194

Following gene: 76817314

Centisome position: 61.48

GC content: 58.52

Gene sequence:

>540_bases
ATGGCTATATCCAATAGCTCACAGAAATTTATCGCGCGCAATCGTGCGCCTCGCGTTCAGATCGAATACGACGTCGAGAT
TTACGGTTCCGAAAAGAAGGTCGAGCTTCCGTTCGTGATGGGCGTGCTCGCGGACCTGTCGGGCAAGCCGCTCGAGCCTC
TGCCGGCGGTCGGCGACCGCAAGTTCTTCAGCATCGATATCGACAATTTCGACGAGCGCATGAAGGCGATGAAGCCGCGT
GTCGCGTTCTCGGTGCCGAATACTCTTTCCGGCGACGGTCAATTGATGGTCGACATCACGTTCGAAAGCATGGACGACTT
TTCTCCCGCGGCGATCGCGAAGAAGGTGGATGCGTTGTCGCAATTGCTGGACGCGCGCACGCAGCTTGCCAATCTGCAGA
CCTACATGGACGGAAAGTCGGGCGCGGAGAACCTCGTGAGCAAGGTGCTCAAGGACCCCGCGCTGCTGAGCGCGCTTGCG
AAGGCGCCGAAGCCCGTGGCGGAACAGGCGGAAAACAGGGAATCGAAGGAAAAGCACTGA

Upstream 100 bases:

>100_bases
AGAAATTGAAGGCGTAACGTTCTGCAAATTTCTATTGCGCGGGCAATGCCGATGAGCGCTTGTTCGTTGATTCTCATTCC
GACTTCAAGATGGAGAAGAT

Downstream 100 bases:

>100_bases
TTCCCGAAACCGGAATCGATCATAGGAGAAAAAATGGCTGCACGTGAATCTCAGGCGCGCTCCGCCGATGCACAGCTCGC
TACGCACTCGGACTTCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: T6ss S; Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion; Type VI Secretion System Core Protein

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAISNSSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPAVGDRKFFSIDIDNFDERMKAMKPR
VAFSVPNTLSGDGQLMVDITFESMDDFSPAAIAKKVDALSQLLDARTQLANLQTYMDGKSGAENLVSKVLKDPALLSALA
KAPKPVAEQAENRESKEKH

Sequences:

>Translated_179_residues
MAISNSSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPAVGDRKFFSIDIDNFDERMKAMKPR
VAFSVPNTLSGDGQLMVDITFESMDDFSPAAIAKKVDALSQLLDARTQLANLQTYMDGKSGAENLVSKVLKDPALLSALA
KAPKPVAEQAENRESKEKH
>Mature_178_residues
AISNSSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPAVGDRKFFSIDIDNFDERMKAMKPRV
AFSVPNTLSGDGQLMVDITFESMDDFSPAAIAKKVDALSQLLDARTQLANLQTYMDGKSGAENLVSKVLKDPALLSALAK
APKPVAEQAENRESKEKH

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19672; Mature: 19541

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISNSSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPAVGDR
CCCCCCCHHHHHHCCCCEEEEEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCC
KFFSIDIDNFDERMKAMKPRVAFSVPNTLSGDGQLMVDITFESMDDFSPAAIAKKVDALS
EEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH
QLLDARTQLANLQTYMDGKSGAENLVSKVLKDPALLSALAKAPKPVAEQAENRESKEKH
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
AISNSSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPAVGDR
CCCCCCHHHHHHCCCCEEEEEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCC
KFFSIDIDNFDERMKAMKPRVAFSVPNTLSGDGQLMVDITFESMDDFSPAAIAKKVDALS
EEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH
QLLDARTQLANLQTYMDGKSGAENLVSKVLKDPALLSALAKAPKPVAEQAENRESKEKH
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA