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The map label for this gene is betI [H]

Identifier: 76819061

GI number: 76819061

Start: 529239

End: 529847

Strand: Direct

Name: betI [H]

Synonym: BURPS1710b_A0375

Alternate gene names: 76819061

Gene position: 529239-529847 (Clockwise)

Preceding gene: 76818139

Following gene: 76817963

Centisome position: 16.63

GC content: 69.95

Gene sequence:

>609_bases
GTGCTCAATGAAGGCTCCCCGATGCCCAAACTCGGAATGCGCGAAATCCGCCGCGCCCAATTGATCGACGCGACGCTGCG
CTCCATCGACGAGGCAGGCCTGCCCGGCACGACGCTCGCGTCCGTCGCGCAGCGCGCGAACATCTCGACCGGCATCGTCA
GCCACTACTTCGGCGACAAGGACGGCCTGCTCGAAGCAACGATGCGCCACGTGCTGCGCGACCTGTGGGCCGCGACGACG
CGCCGCCGCGCGGCCGCGTCCGATGCGCCGCGCGCGCGCCTGCGCGCCGTCGTCGCCGCCAATTTCGACGACACGCAGAT
CAGCGCGCCCGTGATGAAGACGTGGCTCGCGTTCTGGTCGCAGAGCATGCACGAGCCGACGCTAAGACGCCTGCAGCGCG
TCAACACGCGGCGGCTCCATTCGAATCTGTGCGCGGAGTTCGCCAAGACGCTGCCCCGCGCGCGCGCCCGCGAAGCCGCA
AGCGGCCTCGCCGCGTTGATCGACGGCCTGTGGCTGCGCGGCGCGCTGGCGGGCGAACCGCTCGACACGAAGGCGGCCCT
GAAGCTCGCCAACGATTACATCGACCAGTTGCTCGCGCCGCGCGTGTAA

Upstream 100 bases:

>100_bases
CCGGCCACCTCGCAAAGCCCGCCCGATGCGATCGCCTCCTACTTTTTATTGATTGAACGATCAATAAAAAACCGCTATCC
TTCGGACTTCGCCACCCGCC

Downstream 100 bases:

>100_bases
CGCGCCGCGCGCCCACTCCCTCGCCGACACAAGGAGATCCCCATGTCCGTATACGGTCTGCAGCGCCTTTACATCGCCGG
CGCCCACGCCGACGCCACGA

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLNEGSPMPKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATT
RRRAAASDAPRARLRAVVAANFDDTQISAPVMKTWLAFWSQSMHEPTLRRLQRVNTRRLHSNLCAEFAKTLPRARAREAA
SGLAALIDGLWLRGALAGEPLDTKAALKLANDYIDQLLAPRV

Sequences:

>Translated_202_residues
MLNEGSPMPKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATT
RRRAAASDAPRARLRAVVAANFDDTQISAPVMKTWLAFWSQSMHEPTLRRLQRVNTRRLHSNLCAEFAKTLPRARAREAA
SGLAALIDGLWLRGALAGEPLDTKAALKLANDYIDQLLAPRV
>Mature_202_residues
MLNEGSPMPKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATT
RRRAAASDAPRARLRAVVAANFDDTQISAPVMKTWLAFWSQSMHEPTLRRLQRVNTRRLHSNLCAEFAKTLPRARAREAA
SGLAALIDGLWLRGALAGEPLDTKAALKLANDYIDQLLAPRV

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=194, Percent_Identity=57.2164948453608, Blast_Score=218, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22219; Mature: 22219

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEGSPMPKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
DGLLEATMRHVLRDLWAATTRRRAAASDAPRARLRAVVAANFDDTQISAPVMKTWLAFWS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QSMHEPTLRRLQRVNTRRLHSNLCAEFAKTLPRARAREAASGLAALIDGLWLRGALAGEP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LDTKAALKLANDYIDQLLAPRV
CCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLNEGSPMPKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
DGLLEATMRHVLRDLWAATTRRRAAASDAPRARLRAVVAANFDDTQISAPVMKTWLAFWS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QSMHEPTLRRLQRVNTRRLHSNLCAEFAKTLPRARAREAASGLAALIDGLWLRGALAGEP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LDTKAALKLANDYIDQLLAPRV
CCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA