| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819030
Identifier: 76819030
GI number: 76819030
Start: 1943828
End: 1945681
Strand: Direct
Name: 76819030
Synonym: BURPS1710b_A1595
Alternate gene names: NA
Gene position: 1943828-1945681 (Clockwise)
Preceding gene: 76819772
Following gene: 76819245
Centisome position: 61.09
GC content: 67.42
Gene sequence:
>1854_bases ATGACGCCGCGAGCGGCACTTGTCACGCTTCTTCTCGCGGCATGGTCTGCGCCGAGCGTTGCGCAAGCACTCCACCCTGG ATCGGGGGCGCAGAGTGTTGAAGTGGGGGCGGGATCGAACGCATCGGGTTCGCAAAGCACCGCACTGGGTAACGGTGCGC AGGCGACGGGCAGTCATAGCACGGCAACGGGCCAAGGCTCGCATGCGACGGGTAGTAACAGCACGGCAACGGGTCAGGAT GCTAACGCGTCGGGCACATCGAGCACGGCGACGGGCCAAGGTTCGCAAGCGACGGGTAGCAACAGCACGGCAACGGGGCA GGATGCTAACGCGTCGGGTGAATCGAGCACGGCGACGGGCCAAGGTTCGCAAGCGACGGGGGACAACAGCACGGCAACGG GCCAGGGTGCTACCGCGTCGGGTGAATCGAGCACGGCGACGGGCCAGGGTTCGCAAGCGACGGGTAGCAACAGCACGGCA ACGGGGCAGGATGCTAACGCGTCGGGTGAATCGAGCACGGCGACGGGCCAAGGCTCACAAGCGACGGGCAGCAACAGCAC GGCAACGGGGCAGGGTGCTACCGCGTCGGGTGAATCGAGCACGGCGACAGGCCAAGGCTCGCAAGCGACCGGGGATAACA GCACGGCAACGGGTCAAGATGCTAACGCGTCGGGTGAATCGAGCACGGCGATGGGCCAAGGTTCGCAAGCGACGGGCAGC AACAGCACGGCAACGGGGCAGGATGCTATCGCGTCGGGTGAATCGAGCACGGCGACAGGCCAAGACTCGCAAGCGACCGG GGATAACAGCACGGCAACGGGTCAGGATGCTAACGCGTCGGGGGAATCGAGCACGGCGACGGGCCAAGGTTCGCAAGCGA CGGGCAGCAACAGCACGGCAACGGGGCAGGATGCCACCGCGTCGGGGGAATCGAGCACGGCGACGGGCCAAGGTTCGCAA GCGACGGGCAGTAACAGCACGGCAACGGGGCAGGATGCCACCGCGTCGGGGGAATCGAGCACGGCGACGGGCCAAGGTTC GCAAGCGACGGGCAGCAACAGCACGGCAACGGGGGAGGATGCTAACGCGTCGGGTGAATCGAGCACGGCGACAGGCCAAG GTGCGCAAGCGACGGGGGACAACAGCACGGCAGCGGGCCAGAATGCCGCCGCGTCGGGTGAATCGAGCACGGCGACGGGC CAAGGCTCGCAAGCGGCGGGCAGCAACAGCACGGCGAACGGCGCCGGCGCCGCCGCGACCGGACACCAGAGCACTGCTCT GGGCGCGGGCGCTCAAGCCGCTGGCTCACAGGGCGTCGCGAGCGGCTGGAACGCAAACGCGTCGGGGACTCAAGGCGTCG CAATCGGCGGCAATGCCTCGGCGCAGGGCAATCAAAGCATCGCGCTCGGAGCCAATGCGTCGGCGACGGGCGACCACAGC ATCGCGTTGGGCGCCGGCTCGCAGGCAACGGGCTCGAACTCGGTCGCGCTGGGCCAGGGGTCGATCGCGGACCGCGACAA CTCGGTTTCGGTGGGTTCGGATGGCGGTGAGCGCAACGTCACCAATGTGGCGAATGGATGGCACGATACCGACGCCGTCA ATTTCCGGCAACTGCGCGAGGTCGCGCGCTACGCATACAGCGGCATCGCTGCCGCAACTGCGCTGGCCATGATTCCGGAC GTCGACGCAGGCAAGACGTTTTCGATCGGCGTCGGGACGGGCGGCTACCTCGGCTATCAGGCTGTTGCCGTCGGCGCGTC GGCTCGCCTTGGACAAAATCTGAAGGTCCGGGTGGGCGCGGGCATTAGCGCGGCGTCGACGACATGGGGCGCCGGCGCAT CGTATAGCTGGTAG
Upstream 100 bases:
>100_bases AATAGGAAAACTAAAGGATTGAATTGTGAGATATGGGATTAATCGACGTGGACGTGGTGCGGAAAACCGCCTAGGGCGGC AGGAATCTTCGCGGTTCAAC
Downstream 100 bases:
>100_bases CGCCCCGAGGCTCGGCAGAAGAGCGACGGTCAGCGGATGCCGATCGATATCCGCGCCGCTTCGCAATCACGAATGTGTGT CTCGGCCGGGCAGCGTTCGG
Product: Hep_Hag family protein
Products: NA
Alternate protein names: YadA Domain Protein; Outer Membrane Protein; Hemagluttinin Domain-Containing Protein; Autotransporter Adhesin; Hemagglutinin Family Protein; Cell Surface Protein; Adhesin; Haemagglutinin-Related Autotransporter Protein; Large Adhesin; Haemagglutinin Family Protein; Haemagluttinin Family Protein; Hep_Hag Family Protein; Surface Protein; Haemagluttinin Domain Protein; Haemagglutinin; Hep_Hag Family; YadA-Like Protein; Hep_Hag Repeat-Containing Outer Membrane Protein; Hemagluttinin Domain Protein; Surface-Exposed Protein; Hemagluttinin-Like Protein; Hemagglutinin Domain-Containing Protein; YadA C-Terminal Domain Protein; Hep_Hag Repeat-Containing Protein; Hemagluttinin Motif-Containing Protein; Surface-Exposed Adhesin Protein; YadA-Like Haemagluttinin; Hep Hag Family Adhesin; Adhesin XadA; Membrane-Anchored Cell Surface Protein Haemagluttinin; Surface Exposed Protein; Hemagglutinin; Hep_Hag Superfamily; Membrane-Anchored Cell Surface Protein; Haemagglutinin And Invasin Like Cell Surface Protein; Outer Membrane Pathogenesis Protein; Intracellular Motility Protein A; Hemagglutinin-Related Protein; Xanthomonas Adhesin Protein; YadA-Like C-Terminal Domain-Containing; Autotransporter/Adhesin; Hemagluttinin Family Protein; Surface-Exposed Outer Membrane Protein; S-Layer-Like Domain Protein; Peptide Transport System Permease SapB; Haemagglutinin/Invasin; YadA/Haemagluttinin Like Protein; Hemaglutinin/Autotransporter Like Protein; Exported Adhesin; Hemagluttinin Like Protein; Repetitive Surface Protein; Haemagglutinin Adhesin; LOW QUALITY PROTEIN Hep_Hag Family Protein; Surface Protein/Bartonella Adhesin; Hemagluttinin/Autotransporter Adhesin; Outer Membrane Protein Autotransporter And Adhesin; Outer Membrane Protein Haemagluttinin-Like; AT Family Autotransporter/Adhesin; Rho Termination Factor-Like; Haemagluttinin Domain-Containing Protein
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MTPRAALVTLLLAAWSAPSVAQALHPGSGAQSVEVGAGSNASGSQSTALGNGAQATGSHSTATGQGSHATGSNSTATGQD ANASGTSSTATGQGSQATGSNSTATGQDANASGESSTATGQGSQATGDNSTATGQGATASGESSTATGQGSQATGSNSTA TGQDANASGESSTATGQGSQATGSNSTATGQGATASGESSTATGQGSQATGDNSTATGQDANASGESSTAMGQGSQATGS NSTATGQDAIASGESSTATGQDSQATGDNSTATGQDANASGESSTATGQGSQATGSNSTATGQDATASGESSTATGQGSQ ATGSNSTATGQDATASGESSTATGQGSQATGSNSTATGEDANASGESSTATGQGAQATGDNSTAAGQNAAASGESSTATG QGSQAAGSNSTANGAGAAATGHQSTALGAGAQAAGSQGVASGWNANASGTQGVAIGGNASAQGNQSIALGANASATGDHS IALGAGSQATGSNSVALGQGSIADRDNSVSVGSDGGERNVTNVANGWHDTDAVNFRQLREVARYAYSGIAAATALAMIPD VDAGKTFSIGVGTGGYLGYQAVAVGASARLGQNLKVRVGAGISAASTTWGAGASYSW
Sequences:
>Translated_617_residues MTPRAALVTLLLAAWSAPSVAQALHPGSGAQSVEVGAGSNASGSQSTALGNGAQATGSHSTATGQGSHATGSNSTATGQD ANASGTSSTATGQGSQATGSNSTATGQDANASGESSTATGQGSQATGDNSTATGQGATASGESSTATGQGSQATGSNSTA TGQDANASGESSTATGQGSQATGSNSTATGQGATASGESSTATGQGSQATGDNSTATGQDANASGESSTAMGQGSQATGS NSTATGQDAIASGESSTATGQDSQATGDNSTATGQDANASGESSTATGQGSQATGSNSTATGQDATASGESSTATGQGSQ ATGSNSTATGQDATASGESSTATGQGSQATGSNSTATGEDANASGESSTATGQGAQATGDNSTAAGQNAAASGESSTATG QGSQAAGSNSTANGAGAAATGHQSTALGAGAQAAGSQGVASGWNANASGTQGVAIGGNASAQGNQSIALGANASATGDHS IALGAGSQATGSNSVALGQGSIADRDNSVSVGSDGGERNVTNVANGWHDTDAVNFRQLREVARYAYSGIAAATALAMIPD VDAGKTFSIGVGTGGYLGYQAVAVGASARLGQNLKVRVGAGISAASTTWGAGASYSW >Mature_616_residues TPRAALVTLLLAAWSAPSVAQALHPGSGAQSVEVGAGSNASGSQSTALGNGAQATGSHSTATGQGSHATGSNSTATGQDA NASGTSSTATGQGSQATGSNSTATGQDANASGESSTATGQGSQATGDNSTATGQGATASGESSTATGQGSQATGSNSTAT GQDANASGESSTATGQGSQATGSNSTATGQGATASGESSTATGQGSQATGDNSTATGQDANASGESSTAMGQGSQATGSN STATGQDAIASGESSTATGQDSQATGDNSTATGQDANASGESSTATGQGSQATGSNSTATGQDATASGESSTATGQGSQA TGSNSTATGQDATASGESSTATGQGSQATGSNSTATGEDANASGESSTATGQGAQATGDNSTAAGQNAAASGESSTATGQ GSQAAGSNSTANGAGAAATGHQSTALGAGAQAAGSQGVASGWNANASGTQGVAIGGNASAQGNQSIALGANASATGDHSI ALGAGSQATGSNSVALGQGSIADRDNSVSVGSDGGERNVTNVANGWHDTDAVNFRQLREVARYAYSGIAAATALAMIPDV DAGKTFSIGVGTGGYLGYQAVAVGASARLGQNLKVRVGAGISAASTTWGAGASYSW
Specific function: Unknown
COG id: COG5295
COG function: function code UW; Autotransporter adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22095393, Length=365, Percent_Identity=23.013698630137, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI310124315, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI239747149, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI239747145, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310124313, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310124309, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310124307, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310124305, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI239747147, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310124302, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI188497655, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI188497653, Length=350, Percent_Identity=22, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310124317, Length=350, Percent_Identity=22, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI157805478, Length=300, Percent_Identity=24, Blast_Score=90, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56900; Mature: 56769
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRAALVTLLLAAWSAPSVAQALHPGSGAQSVEVGAGSNASGSQSTALGNGAQATGSHS CCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC TATGQGSHATGSNSTATGQDANASGTSSTATGQGSQATGSNSTATGQDANASGESSTATG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QGSQATGDNSTATGQGATASGESSTATGQGSQATGSNSTATGQDANASGESSTATGQGSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATGSNSTATGQGATASGESSTATGQGSQATGDNSTATGQDANASGESSTAMGQGSQATGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC NSTATGQDAIASGESSTATGQDSQATGDNSTATGQDANASGESSTATGQGSQATGSNSTA CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGQDATASGESSTATGQGSQATGSNSTATGQDATASGESSTATGQGSQATGSNSTATGED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANASGESSTATGQGAQATGDNSTAAGQNAAASGESSTATGQGSQAAGSNSTANGAGAAAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHQSTALGAGAQAAGSQGVASGWNANASGTQGVAIGGNASAQGNQSIALGANASATGDHS CCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCE IALGAGSQATGSNSVALGQGSIADRDNSVSVGSDGGERNVTNVANGWHDTDAVNFRQLRE EEEECCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHH VARYAYSGIAAATALAMIPDVDAGKTFSIGVGTGGYLGYQAVAVGASARLGQNLKVRVGA HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHEEEEECCHHHCCCCEEEEECC GISAASTTWGAGASYSW CCCCCCCCCCCCCCCCC >Mature Secondary Structure TPRAALVTLLLAAWSAPSVAQALHPGSGAQSVEVGAGSNASGSQSTALGNGAQATGSHS CCHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC TATGQGSHATGSNSTATGQDANASGTSSTATGQGSQATGSNSTATGQDANASGESSTATG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QGSQATGDNSTATGQGATASGESSTATGQGSQATGSNSTATGQDANASGESSTATGQGSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATGSNSTATGQGATASGESSTATGQGSQATGDNSTATGQDANASGESSTAMGQGSQATGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC NSTATGQDAIASGESSTATGQDSQATGDNSTATGQDANASGESSTATGQGSQATGSNSTA CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGQDATASGESSTATGQGSQATGSNSTATGQDATASGESSTATGQGSQATGSNSTATGED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANASGESSTATGQGAQATGDNSTAAGQNAAASGESSTATGQGSQAAGSNSTANGAGAAAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHQSTALGAGAQAAGSQGVASGWNANASGTQGVAIGGNASAQGNQSIALGANASATGDHS CCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCE IALGAGSQATGSNSVALGQGSIADRDNSVSVGSDGGERNVTNVANGWHDTDAVNFRQLRE EEEECCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHH VARYAYSGIAAATALAMIPDVDAGKTFSIGVGTGGYLGYQAVAVGASARLGQNLKVRVGA HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHEEEEECCHHHCCCCEEEEECC GISAASTTWGAGASYSW CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA